BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028236
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-21
emb|CAN71191.1| hypothetical protein VITISV_019119 [Vitis vinifera]   105   4e-21
ref|XP_004147372.1| PREDICTED: pentatricopeptide repeat-containi...   102   3e-20
ref|XP_002306238.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_004173017.1| PREDICTED: pentatricopeptide repeat-containi...    85   5e-15

>ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera] gi|296088567|emb|CBI37558.3| unnamed
           protein product [Vitis vinifera]
          Length = 492

 Score =  105 bits (262), Expect = 4e-21
 Identities = 46/85 (54%), Positives = 65/85 (76%)
 Frame = +1

Query: 1   CISLSSIHKAKQAHLQILINNLLPNVTLETDLLLAYSKCTHLEDAKRVFDRMNKRNMHSW 180
           C+  S+I +AKQ H QIL++  +PN+TL+TDLLL YSKC  L+DA++VFD+M +RNMHSW
Sbjct: 16  CVPHSAISQAKQTHAQILVHGFIPNITLQTDLLLVYSKCGVLQDARKVFDKMVERNMHSW 75

Query: 181 NIMIYSHVQKSLLFEALTIFNEFLK 255
           NI+I S+      ++AL +F+ FLK
Sbjct: 76  NILIASYAHNCFFYDALGVFDSFLK 100


>emb|CAN71191.1| hypothetical protein VITISV_019119 [Vitis vinifera]
          Length = 880

 Score =  105 bits (262), Expect = 4e-21
 Identities = 46/85 (54%), Positives = 65/85 (76%)
 Frame = +1

Query: 1   CISLSSIHKAKQAHLQILINNLLPNVTLETDLLLAYSKCTHLEDAKRVFDRMNKRNMHSW 180
           C+  S+I +AKQ H QIL++  +PN+TL+TDLLL YSKC  L+DA++VFD+M +RNMHSW
Sbjct: 446 CVPHSAISQAKQTHAQILVHGFIPNITLQTDLLLVYSKCGVLQDARKVFDKMVERNMHSW 505

Query: 181 NIMIYSHVQKSLLFEALTIFNEFLK 255
           NI+I S+      ++AL +F+ FLK
Sbjct: 506 NILIASYAHNCFFYDALGVFDSFLK 530


>ref|XP_004147372.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 502

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/83 (59%), Positives = 60/83 (72%)
 Frame = +1

Query: 1   CISLSSIHKAKQAHLQILINNLLPNVTLETDLLLAYSKCTHLEDAKRVFDRMNKRNMHSW 180
           C    +I +AKQAH QILI+  LP++TL TDLLL Y KC  L DA+ VFD+M  RNMHSW
Sbjct: 17  CAQSYAIAQAKQAHAQILIHGFLPHLTLLTDLLLVYCKCGFLHDARNVFDKMAHRNMHSW 76

Query: 181 NIMIYSHVQKSLLFEALTIFNEF 249
           NI+I S+V  S  F+AL +FNEF
Sbjct: 77  NILIASYVHNSFYFDALNVFNEF 99


>ref|XP_002306238.1| predicted protein [Populus trichocarpa] gi|222855687|gb|EEE93234.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/85 (56%), Positives = 65/85 (76%)
 Frame = +1

Query: 1   CISLSSIHKAKQAHLQILINNLLPNVTLETDLLLAYSKCTHLEDAKRVFDRMNKRNMHSW 180
           C + S I++AKQ + QI+++N L NVTL+TDLLLAYSK   L +A++VFDRM +RNMHSW
Sbjct: 16  CANHSLIYQAKQINAQIVLSNYLSNVTLQTDLLLAYSKSGFLLEARKVFDRMPERNMHSW 75

Query: 181 NIMIYSHVQKSLLFEALTIFNEFLK 255
           NIM+ S+ Q     +A+ IF+EFLK
Sbjct: 76  NIMMSSYAQNYCYSDAICIFDEFLK 100


>ref|XP_004173017.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Cucumis sativus]
          Length = 472

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/71 (57%), Positives = 52/71 (73%)
 Frame = +1

Query: 1   CISLSSIHKAKQAHLQILINNLLPNVTLETDLLLAYSKCTHLEDAKRVFDRMNKRNMHSW 180
           C    +I +AKQAH QILI+  LP++TL TDLLL Y KC  L DA+ VFD+M  RNMHSW
Sbjct: 17  CAQSYAIAQAKQAHAQILIHGFLPHLTLLTDLLLVYCKCGFLHDARNVFDKMAHRNMHSW 76

Query: 181 NIMIYSHVQKS 213
           NI+I S++ K+
Sbjct: 77  NILIASYMFKA 87