BLASTX nr result

ID: Coptis21_contig00028231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028231
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892499.1| agenet domain-containing protein [Arabidopsi...    88   6e-16
gb|AAD18097.1| T31J12.4 [Arabidopsis thaliana]                         86   3e-15
ref|NP_172403.3| agenet domain-containing protein [Arabidopsis t...    86   3e-15
dbj|BAD44256.1| unknown protein [Arabidopsis thaliana]                 85   5e-15
ref|XP_002277366.2| PREDICTED: uncharacterized protein LOC100266...    82   6e-14

>ref|XP_002892499.1| agenet domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338341|gb|EFH68758.1| agenet domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 518

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/120 (41%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
 Frame = +1

Query: 160 VEVSSNEVGYEDSWSEATLIC-PADIKNTSKFLVQFKTLL-DNKTRRPLKSFVDFAQLRP 333
           VE+SS+E+G+  SW    +I  P+  K++ K  V++ TL  D +  +PLK  VD +QLRP
Sbjct: 49  VEISSDEIGFRGSWYLGKVITTPSSHKDSLKCQVEYTTLFFDKEGTKPLKEVVDMSQLRP 108

Query: 334 APPKFGVDASKKFLMVNDEVDGFRKNGWWRGTVIEAFRPHFKFVVFFRRTKEKWTFRVDK 513
             P       KK + V +EVD F  +GWW G V E      KF VFFR +KE+  FR D+
Sbjct: 109 PAPPMSEREKKKDIAVGEEVDAFYNDGWWEGDVTEVL-DDGKFSVFFRSSKEQIRFRKDE 167



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/114 (35%), Positives = 62/114 (54%)
 Frame = +1

Query: 160 VEVSSNEVGYEDSWSEATLICPADIKNTSKFLVQFKTLLDNKTRRPLKSFVDFAQLRPAP 339
           VEVSS+E G++  W  A ++ P       KFLV+++ L +     PLK   DF  +RP P
Sbjct: 228 VEVSSDEEGFQGCWFAAKVVEPV---GEDKFLVEYRDLREKDGIEPLKEETDFLHIRPPP 284

Query: 340 PKFGVDASKKFLMVNDEVDGFRKNGWWRGTVIEAFRPHFKFVVFFRRTKEKWTF 501
           P+   D    F  V D+++ F  +GWW G VI+  +      ++FR+++EK  F
Sbjct: 285 PR---DEDIDF-AVGDKINAFYNDGWWVGVVIDGMKDG-TVGIYFRQSQEKMRF 333



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/114 (32%), Positives = 56/114 (49%)
 Frame = +1

Query: 160 VEVSSNEVGYEDSWSEATLICPADIKNTSKFLVQFKTLLDNKTRRPLKSFVDFAQLRPAP 339
           VEVS  E G+EDSW  A LI   + +   K LV++  L     + PL+  V+ +Q+RP P
Sbjct: 387 VEVSPEEEGFEDSWFLAKLI---EYRGKDKCLVEYDKLKAEDGKEPLREEVNVSQIRPQP 443

Query: 340 PKFGVDASKKFLMVNDEVDGFRKNGWWRGTVIEAFRPHFKFVVFFRRTKEKWTF 501
            +            +D+V+    +GWW G VI        ++V F +T+E   F
Sbjct: 444 LE---SVMVSPFERHDKVNALYNDGWWVG-VIRKVLAKSSYLVLFEKTQEMLRF 493


>gb|AAD18097.1| T31J12.4 [Arabidopsis thaliana]
          Length = 514

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
 Frame = +1

Query: 160 VEVSSNEVGYEDSW--SEATLICPADIKNTSKFLVQFKTLL-DNKTRRPLKSFVDFAQLR 330
           VE+SS+E+G+  SW   +   I  +  K++ K  V++ TL  D +  +PLK  VD +QLR
Sbjct: 20  VEISSDEIGFRGSWYMGKVITIPSSSDKDSVKCQVEYTTLFFDKEGTKPLKEVVDMSQLR 79

Query: 331 PAPPKFGVDASKKFLMVNDEVDGFRKNGWWRGTVIEAFRPHFKFVVFFRRTKEKWTFRVD 510
           P  P       KK ++V +EVD F  +GWW G V E      KF VFFR +KE+  FR D
Sbjct: 80  PPAPPMSEIEKKKKIVVGEEVDAFYNDGWWEGDVTEVL-DDGKFSVFFRSSKEQIRFRKD 138

Query: 511 K 513
           +
Sbjct: 139 E 139



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/114 (35%), Positives = 63/114 (55%)
 Frame = +1

Query: 160 VEVSSNEVGYEDSWSEATLICPADIKNTSKFLVQFKTLLDNKTRRPLKSFVDFAQLRPAP 339
           VEVSS+E G++  W  A ++ P       KFLV+++ L +     PLK   DF  +RP P
Sbjct: 225 VEVSSDEEGFQGCWFAAKVVEPV---GEDKFLVEYRDLREKDGIEPLKEETDFLHIRPPP 281

Query: 340 PKFGVDASKKFLMVNDEVDGFRKNGWWRGTVIEAFRPHFKFVVFFRRTKEKWTF 501
           P+   D    F  V D+++ F  +GWW G VI+  + H    ++FR+++EK  F
Sbjct: 282 PR---DEDIDF-AVGDKINAFYNDGWWVGVVIDGMK-HGTVGIYFRQSQEKMRF 330


>ref|NP_172403.3| agenet domain-containing protein [Arabidopsis thaliana]
           gi|63147400|gb|AAY34173.1| At1g09320 [Arabidopsis
           thaliana] gi|332190308|gb|AEE28429.1| agenet
           domain-containing protein [Arabidopsis thaliana]
          Length = 517

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
 Frame = +1

Query: 160 VEVSSNEVGYEDSW--SEATLICPADIKNTSKFLVQFKTLL-DNKTRRPLKSFVDFAQLR 330
           VE+SS+E+G+  SW   +   I  +  K++ K  V++ TL  D +  +PLK  VD +QLR
Sbjct: 45  VEISSDEIGFRGSWYMGKVITIPSSSDKDSVKCQVEYTTLFFDKEGTKPLKEVVDMSQLR 104

Query: 331 PAPPKFGVDASKKFLMVNDEVDGFRKNGWWRGTVIEAFRPHFKFVVFFRRTKEKWTFRVD 510
           P  P       KK ++V +EVD F  +GWW G V E      KF VFFR +KE+  FR D
Sbjct: 105 PPAPPMSEIEKKKKIVVGEEVDAFYNDGWWEGDVTEVL-DDGKFSVFFRSSKEQIRFRKD 163

Query: 511 K 513
           +
Sbjct: 164 E 164



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/114 (35%), Positives = 63/114 (55%)
 Frame = +1

Query: 160 VEVSSNEVGYEDSWSEATLICPADIKNTSKFLVQFKTLLDNKTRRPLKSFVDFAQLRPAP 339
           VEVSS+E G++  W  A ++ P       KFLV+++ L +     PLK   DF  +RP P
Sbjct: 227 VEVSSDEEGFQGCWFAAKVVEPV---GEDKFLVEYRDLREKDGIEPLKEETDFLHIRPPP 283

Query: 340 PKFGVDASKKFLMVNDEVDGFRKNGWWRGTVIEAFRPHFKFVVFFRRTKEKWTF 501
           P+   D    F  V D+++ F  +GWW G VI+  + H    ++FR+++EK  F
Sbjct: 284 PR---DEDIDF-AVGDKINAFYNDGWWVGVVIDGMK-HGTVGIYFRQSQEKMRF 332


>dbj|BAD44256.1| unknown protein [Arabidopsis thaliana]
          Length = 517

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 51/122 (41%), Positives = 73/122 (59%), Gaps = 4/122 (3%)
 Frame = +1

Query: 160 VEVSSNEVGYEDSW--SEATLICPADIKNTSKFLVQFKTLL-DNKTRRPLKSFVDFAQLR 330
           VE+SS+E+G+  SW   +   I  +  K++ K  V++ TL  D +  +PLK  VD +QLR
Sbjct: 45  VEISSDEIGFRGSWYMGKVITIPSSSDKDSVKCQVEYTTLFFDKEGTKPLKEVVDMSQLR 104

Query: 331 -PAPPKFGVDASKKFLMVNDEVDGFRKNGWWRGTVIEAFRPHFKFVVFFRRTKEKWTFRV 507
            PAPP   ++  KK ++V +EVD F  +GWW G V E      KF VFFR +KE+  FR 
Sbjct: 105 SPAPPMSEIEKKKK-IVVGEEVDAFYNDGWWEGDVTEVL-DDGKFSVFFRSSKEQIRFRK 162

Query: 508 DK 513
           D+
Sbjct: 163 DE 164



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/114 (35%), Positives = 63/114 (55%)
 Frame = +1

Query: 160 VEVSSNEVGYEDSWSEATLICPADIKNTSKFLVQFKTLLDNKTRRPLKSFVDFAQLRPAP 339
           VEVSS+E G++  W  A ++ P       KFLV+++ L +     PLK   DF  +RP P
Sbjct: 227 VEVSSDEEGFQGCWFAAKVVEPV---GEDKFLVEYRDLREKDGIEPLKEETDFLHIRPPP 283

Query: 340 PKFGVDASKKFLMVNDEVDGFRKNGWWRGTVIEAFRPHFKFVVFFRRTKEKWTF 501
           P+   D    F  V D+++ F  +GWW G VI+  + H    ++FR+++EK  F
Sbjct: 284 PR---DEDIDF-AVGDKINAFYNDGWWVGVVIDGMK-HGTVGIYFRQSQEKMRF 332


>ref|XP_002277366.2| PREDICTED: uncharacterized protein LOC100266586 [Vitis vinifera]
          Length = 296

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/117 (36%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
 Frame = +1

Query: 157 EVEVSSNEVGYEDSWSEATLICP-ADIKNTSKFLVQFKTLL-DNKTRRPLKSFVDFAQLR 330
           E+E+SS+E G+  +W   T++ P A  KN +  +V++KT++ D     PL+  +D  QLR
Sbjct: 9   EIEISSDEDGFRGAWFAGTVVKPPAKKKNKTLVVVEYKTIMADESGANPLRETMDVLQLR 68

Query: 331 PAPPKFGVDASKKFLMVNDEVDGFRKNGWWRGTVIEAFRPHFKFVVFFRRTKEKWTF 501
           P PP+   + S+ F  +++EVD +  +GWW G + EA   + +F VFFR ++E+  F
Sbjct: 69  PPPPR---ERSRTF-QISEEVDAYYNDGWWEGVITEA-HENSRFAVFFRTSREQLEF 120



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/114 (33%), Positives = 59/114 (51%)
 Frame = +1

Query: 160 VEVSSNEVGYEDSWSEATLICPADIKNTSKFLVQFKTLLDNKTRRPLKSFVDFAQLRPAP 339
           VEVSS+E G++ +W  AT++    +    K ++++K+L  +     L+  VD   +RP P
Sbjct: 165 VEVSSDEDGFQGAWFAATIV---KVIGKDKLMIEYKSLRTDDDTDFLREEVDALHIRPYP 221

Query: 340 PKFGVDASKKFLMVNDEVDGFRKNGWWRGTVIEAFRPHFKFVVFFRRTKEKWTF 501
           P+  V      L   +EVD    +GWW G VI        +VV+FR T E+  F
Sbjct: 222 PETVVVDRFNLL---EEVDALYNDGWWVG-VISKVLSRSCYVVYFRSTNEEMKF 271


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