BLASTX nr result

ID: Coptis21_contig00028226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028226
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...   123   4e-26
ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262...   122   5e-26
emb|CBI33855.3| unnamed protein product [Vitis vinifera]              122   5e-26
gb|EAZ31831.1| hypothetical protein OsJ_15991 [Oryza sativa Japo...   110   3e-22

>ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|222833857|gb|EEE72334.1|
           predicted protein [Populus trichocarpa]
          Length = 642

 Score =  124 bits (312), Expect = 1e-26
 Identities = 72/155 (46%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 NSPKSKQIYRIIRAAHNNVQQEQGAASTESDDDVASRLEEQLRVSEQEPDLSEEHLRIND 284
           N    K ++   +      ++E    +    D V +RLEE   +  +EP+LSEE LRIND
Sbjct: 89  NENMEKHLHETKKEEIEEKKEESEPDNGNGVDGVVTRLEEFF-LGVEEPELSEEQLRIND 147

Query: 283 QLQEDELLAMEAIFGENLSILREEGGLRVFEIYIHIETPDELTISAKLLS-SNGNAKLGM 107
           QLQEDELLAME+I+G+N  IL  + GLR F+I+IHIE P E T++AKL S  + N K G 
Sbjct: 148 QLQEDELLAMESIYGDNTFILERQRGLRSFQIHIHIEVPAEFTVTAKLYSLGDCNGKSG- 206

Query: 106 KSSSSLVTAECSNEFVYHFKVEHLPPIILTCLLPK 2
                      S+EF Y F+V++LPPI+LTCLLPK
Sbjct: 207 ----------SSDEFSYSFEVQYLPPIVLTCLLPK 231


>ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Cucumis sativus]
           gi|449525814|ref|XP_004169911.1| PREDICTED: E3
           ubiquitin-protein ligase RNF14-like [Cucumis sativus]
          Length = 638

 Score =  123 bits (308), Expect = 4e-26
 Identities = 74/141 (52%), Positives = 99/141 (70%), Gaps = 1/141 (0%)
 Frame = -2

Query: 421 AHNNVQQEQGAAS-TESDDDVASRLEEQLRVSEQEPDLSEEHLRINDQLQEDELLAMEAI 245
           A  N +   G +S TE++DDV SRLE  L+ S +EP+LSEE L IN+QLQEDELLA+E+I
Sbjct: 94  AKPNCEVTPGNSSLTEAEDDVYSRLE-MLQRSSEEPELSEEQLSINNQLQEDELLALESI 152

Query: 244 FGENLSILREEGGLRVFEIYIHIETPDELTISAKLLSSNGNAKLGMKSSSSLVTAECSNE 65
           +GEN+ IL E  G R F+I+IHIE P ++TI+AKL   N ++ L +KS +       S+E
Sbjct: 153 YGENVYILDEYKGQRRFQIFIHIENPGDITITAKL---NSSSSLEIKSPN-------SDE 202

Query: 64  FVYHFKVEHLPPIILTCLLPK 2
           F   F V++L PI+LTCLLPK
Sbjct: 203 FSCSFDVKYLNPIVLTCLLPK 223


>ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262589 [Vitis vinifera]
          Length = 868

 Score =  122 bits (307), Expect = 5e-26
 Identities = 67/137 (48%), Positives = 94/137 (68%)
 Frame = -2

Query: 412 NVQQEQGAASTESDDDVASRLEEQLRVSEQEPDLSEEHLRINDQLQEDELLAMEAIFGEN 233
           N +  + +  T   DDV SRLE+ L V  +EP+LSE+ LRIN QLQEDELLAM++I+G+N
Sbjct: 324 NEEVVEASDFTHDVDDVGSRLEK-LVVGVEEPELSEDRLRINAQLQEDELLAMQSIYGDN 382

Query: 232 LSILREEGGLRVFEIYIHIETPDELTISAKLLSSNGNAKLGMKSSSSLVTAECSNEFVYH 53
           + IL  + GL+ F+I++HIE   ELT++AKL SS+G              ++ S++F Y 
Sbjct: 383 VFILDRQQGLQSFQIHVHIEALGELTVTAKLNSSSGRT----------TESDGSDDFSYS 432

Query: 52  FKVEHLPPIILTCLLPK 2
           F V++LPPI+LTCLLPK
Sbjct: 433 FNVQYLPPIVLTCLLPK 449


>emb|CBI33855.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  122 bits (307), Expect = 5e-26
 Identities = 67/137 (48%), Positives = 94/137 (68%)
 Frame = -2

Query: 412 NVQQEQGAASTESDDDVASRLEEQLRVSEQEPDLSEEHLRINDQLQEDELLAMEAIFGEN 233
           N +  + +  T   DDV SRLE+ L V  +EP+LSE+ LRIN QLQEDELLAM++I+G+N
Sbjct: 118 NEEVVEASDFTHDVDDVGSRLEK-LVVGVEEPELSEDRLRINAQLQEDELLAMQSIYGDN 176

Query: 232 LSILREEGGLRVFEIYIHIETPDELTISAKLLSSNGNAKLGMKSSSSLVTAECSNEFVYH 53
           + IL  + GL+ F+I++HIE   ELT++AKL SS+G              ++ S++F Y 
Sbjct: 177 VFILDRQQGLQSFQIHVHIEALGELTVTAKLNSSSGRT----------TESDGSDDFSYS 226

Query: 52  FKVEHLPPIILTCLLPK 2
           F V++LPPI+LTCLLPK
Sbjct: 227 FNVQYLPPIVLTCLLPK 243


>gb|EAZ31831.1| hypothetical protein OsJ_15991 [Oryza sativa Japonica Group]
          Length = 594

 Score =  110 bits (274), Expect = 3e-22
 Identities = 52/123 (42%), Positives = 83/123 (67%)
 Frame = -2

Query: 373 DDDVASRLEEQLRVSEQEPDLSEEHLRINDQLQEDELLAMEAIFGENLSILREEGGLRVF 194
           +++   +L+E +    +E +L+EE    NDQ QEDE+ A+EAIFG+N+ I  ++GG R F
Sbjct: 87  EEEAVRKLQELVGFGGEEVELTEEEAAANDQRQEDEIFALEAIFGDNVVIFNKKGGQRSF 146

Query: 193 EIYIHIETPDELTISAKLLSSNGNAKLGMKSSSSLVTAECSNEFVYHFKVEHLPPIILTC 14
           +++++IE PD + +SA+L   +G+ K G    +     + S++ VY F+VEHLPPI+LTC
Sbjct: 147 QVHVYIEIPDGIDVSARLGYGSGSLKYGAGHDT-----DASDDLVYKFRVEHLPPILLTC 201

Query: 13  LLP 5
           LLP
Sbjct: 202 LLP 204


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