BLASTX nr result
ID: Coptis21_contig00028224
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00028224
(1436 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281453.1| PREDICTED: uncharacterized protein LOC100252... 189 2e-45
ref|XP_002516555.1| conserved hypothetical protein [Ricinus comm... 186 1e-44
ref|XP_004136217.1| PREDICTED: U-box domain-containing protein 2... 176 1e-41
ref|NP_196716.1| ARM repeat-containing protein-like protein [Ara... 169 2e-39
ref|XP_002873519.1| hypothetical protein ARALYDRAFT_487992 [Arab... 166 1e-38
>ref|XP_002281453.1| PREDICTED: uncharacterized protein LOC100252675 [Vitis vinifera]
Length = 344
Score = 189 bits (479), Expect = 2e-45
Identities = 120/262 (45%), Positives = 147/262 (56%), Gaps = 15/262 (5%)
Frame = +3
Query: 504 FTQWRFPIPESPSLHCLPQQPESTSNM-------------PKPPIPSMT-LTELFHVAEI 641
FTQWRFP+P S LH QP S S+ P PP+ ++ L ELFHVAE+
Sbjct: 91 FTQWRFPLPNSLILH--HHQPPSQSHPSHTQISPQTDHPPPSPPLIAVANLEELFHVAEL 148
Query: 642 QLSADSYNSRLSSVHLLERSLVPNLPANGPENPTCPLPVMKGLVGLVKDIAGAKPATKVL 821
QLS S +L+++ LLERSLVP A G CP VM+G+VG +KD AGA+PATKVL
Sbjct: 149 QLSTGSDVEKLAALQLLERSLVP---AAGGGEEACPAAVMRGVVGCLKDRAGARPATKVL 205
Query: 822 LALCLFEPNRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTVPEGAAEVRDHALG 1001
LALCL E NRH CTV EGAAE+R HAL
Sbjct: 206 LALCLAEGNRHVAVEAGAVAEVVEAMSEMEGAVAERALAALELMCTVAEGAAELRAHALS 265
Query: 1002 VPMMVQMMGKMNGRGKESAISVLSVIFSGGPGSRXXXXXXXXXXXXXXXXMQGECSVRGR 1181
VPMM+ MM M GRGKE AIS+L+VI+ G+ +QG+CS RG+
Sbjct: 266 VPMMISMMESMAGRGKECAISILAVIYI---GAGDQAPPSEEVARAVALALQGDCSARGK 322
Query: 1182 RKGAQLLKCL-ENGRLDLSEVG 1244
RKGAQLL+ L ENGRL+L++ G
Sbjct: 323 RKGAQLLRALQENGRLELTQEG 344
>ref|XP_002516555.1| conserved hypothetical protein [Ricinus communis]
gi|223544375|gb|EEF45896.1| conserved hypothetical
protein [Ricinus communis]
Length = 373
Score = 186 bits (473), Expect = 1e-44
Identities = 115/252 (45%), Positives = 144/252 (57%), Gaps = 15/252 (5%)
Frame = +3
Query: 504 FTQWRFPIPESPSLH--CLPQ-QPESTSNMPKPPIPSMTLTELFHVAEIQLSADSYNSRL 674
FTQW+FP+ SP LH PQ +P+ST +P PPI S L E+FH AE+QLS S + +L
Sbjct: 92 FTQWKFPLVTSP-LHPESDPQTKPDSTIPLP-PPINSTKLQEVFHAAELQLSGGSEHEKL 149
Query: 675 SSVHLLERSLVPNLPANGPENPTCPLPVMKGLVGLVKDIAGAKPATKVLLALCLFEPNRH 854
+S+HLLERSLVPN P++ CP +M+ LV +K+ AGAKPATK+LLALCL E NRH
Sbjct: 150 ASLHLLERSLVPNPPSHS----VCPPQLMRALVANLKNKAGAKPATKILLALCLAEANRH 205
Query: 855 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTVPEGAAEVRDHALGVPMMVQMMGKM 1034
CTV EGAAE+R HAL VP+MV MMGK+
Sbjct: 206 VAVEAGAVGTIIEVVMELEAPAAERALAALELTCTVEEGAAELRTHALAVPVMVAMMGKV 265
Query: 1035 NGRGKESAISVLSVIFSGGPGS------------RXXXXXXXXXXXXXXXXMQGECSVRG 1178
+GRGKE AIS L+V++ GG G + +QG+C+ RG
Sbjct: 266 SGRGKEYAISALAVVYGGGGGEGGGGLVAVDEEVQVQHAPPEEVARAVVLALQGDCTARG 325
Query: 1179 RRKGAQLLKCLE 1214
RRKG QLLK LE
Sbjct: 326 RRKGHQLLKALE 337
>ref|XP_004136217.1| PREDICTED: U-box domain-containing protein 26-like [Cucumis sativus]
gi|449534015|ref|XP_004173965.1| PREDICTED: U-box
domain-containing protein 26-like [Cucumis sativus]
Length = 324
Score = 176 bits (446), Expect = 1e-41
Identities = 124/330 (37%), Positives = 152/330 (46%), Gaps = 10/330 (3%)
Frame = +3
Query: 270 MKTHNAKIKNPPRPLFSCGIFSYCTQTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 449
M+TH K+K LFSCG F +CT++V
Sbjct: 1 MRTHQPKLKTQ---LFSCGFFRHCTRSVLSPTASHSPALPSLPSASDQPPPPPSRRPPLP 57
Query: 450 XXXXXXXXXXXXXXXXXXFTQWRFPIPESPSLHCLPQ--QPESTSNMPKP-----PIPSM 608
FTQWRFP+P SP P P ST ++P P PI +
Sbjct: 58 DSESSSSSASQS------FTQWRFPLPHSPIFTQQPSISDPPSTFSIPPPDPLPPPISAS 111
Query: 609 TLTELFHVAEIQLSADSYNSRLSSVHLLERSLVPNLPANGPENPTCPLPVMKGLVGLVKD 788
L E+ VAE+QLS+ S + RL+++ LLERSLVPN + C +M+GL+
Sbjct: 112 ALKEILQVAELQLSSASDSDRLAALQLLERSLVPNPSLDSD----CTPELMRGLIESFNI 167
Query: 789 IAGAKPATKVLLALCLFEPNRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTVPE 968
G+KPATK+LLALCL E NRH CTV E
Sbjct: 168 KTGSKPATKILLALCLAEGNRHVAVEAGAVGAVIESLPEMEDAAAERALASLELMCTVAE 227
Query: 969 GAAEVRDHALGVPMMVQMMGKMNGRGKESAISVLSVIFSGGPGSR---XXXXXXXXXXXX 1139
GAAEVR HAL VP MV MMG+M RGKESAISVL VIF G S
Sbjct: 228 GAAEVRSHALSVPAMVTMMGRMAARGKESAISVLGVIFDSGVSSEAKSGVTAPPEEVARA 287
Query: 1140 XXXXMQGECSVRGRRKGAQLLKCLENGRLD 1229
+QG+ SVRGRRKGA+LLK L+ + D
Sbjct: 288 VVLALQGDSSVRGRRKGARLLKTLQEQQAD 317
>ref|NP_196716.1| ARM repeat-containing protein-like protein [Arabidopsis thaliana]
gi|7573412|emb|CAB87715.1| putative protein [Arabidopsis
thaliana] gi|27754693|gb|AAO22790.1| unknown protein
[Arabidopsis thaliana] gi|28394025|gb|AAO42420.1| unknown
protein [Arabidopsis thaliana]
gi|332004311|gb|AED91694.1| ARM repeat-containing
protein-like protein [Arabidopsis thaliana]
Length = 314
Score = 169 bits (427), Expect = 2e-39
Identities = 118/327 (36%), Positives = 154/327 (47%), Gaps = 12/327 (3%)
Frame = +3
Query: 300 PPRPLFSCGIFSYCTQTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 479
PPRPLFSCG F CTQ+V
Sbjct: 13 PPRPLFSCGFFRRCTQSVLSPTSPHQQQPRRKATTTSSSSSSSSTSTSQS---------- 62
Query: 480 XXXXXXXXFTQWRFP--IPESPSLHCLPQQPESTSNMPKPPIP-SMTLTELFHVAEIQLS 650
FTQWRFP + ++PS P P P PP+P + TL E F +AE+ L+
Sbjct: 63 --------FTQWRFPHHLDQTPSTAPPPPHPPP----PPPPLPVTTTLQETFQIAELHLT 110
Query: 651 ADSYNSRLSSVHLLERSLVPNLPANGPENPTCPLPVMKGLVGLVKD---IAGAKPATKVL 821
+ S + +L ++ LLER +VP+ P++ PTCP +M+GLV ++ I AK TK+L
Sbjct: 111 SVSESDKLLALQLLERVVVPDPPSD----PTCPPGLMRGLVSCLRSNNKIVTAKYVTKIL 166
Query: 822 LALCLFEPNRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTVPEGAAEVRDHALG 1001
LALCL E NRH CT EGAAEVR HA+
Sbjct: 167 LALCLAEGNRHVAVEAGAARAVVETAAGLEISAVERALAALELMCTTAEGAAEVRAHAMT 226
Query: 1002 VPMMVQMMGKMNGRGKESAISVLSVIF-----SGGPGSRXXXXXXXXXXXXXXXXMQGEC 1166
VP MV +M ++ GRG+E AIS+LSV++ G G ++GEC
Sbjct: 227 VPAMVAVMARLAGRGREYAISILSVVYGKGGEGGDSGEEIAVAPAEEVARAVALALEGEC 286
Query: 1167 SVRGRRKGAQLLKCLEN-GRLDLSEVG 1244
+ RG+RKGAQLLK LE GRLDLS+ G
Sbjct: 287 TARGKRKGAQLLKTLEEYGRLDLSQNG 313
>ref|XP_002873519.1| hypothetical protein ARALYDRAFT_487992 [Arabidopsis lyrata subsp.
lyrata] gi|297319356|gb|EFH49778.1| hypothetical protein
ARALYDRAFT_487992 [Arabidopsis lyrata subsp. lyrata]
Length = 313
Score = 166 bits (421), Expect = 1e-38
Identities = 116/325 (35%), Positives = 150/325 (46%), Gaps = 10/325 (3%)
Frame = +3
Query: 300 PPRPLFSCGIFSYCTQTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 479
PPRPLFSCG F CTQ+V
Sbjct: 13 PPRPLFSCGFFRRCTQSVLSPTSPHQQQPRRKPTTTSSSSSSSSTSTSQS---------- 62
Query: 480 XXXXXXXXFTQWRFPIPESPSLHCLPQQPESTSNMPKPPIP-SMTLTELFHVAEIQLSAD 656
FTQWRFP P+ P P P PP+P + TL E F +AE+ L++
Sbjct: 63 --------FTQWRFPHHLDPTPSTAPPPPPPP---PPPPLPVTTTLQETFQIAELHLTSV 111
Query: 657 SYNSRLSSVHLLERSLVPNLPANGPENPTCPLPVMKGLVGLVKD---IAGAKPATKVLLA 827
S + +L ++ LLER +VP+ P++ PTCP +M+ LV ++ I AK TK+LLA
Sbjct: 112 SESDKLLALQLLERVVVPDPPSD----PTCPPGLMRCLVSCLRSNNKIVTAKYVTKILLA 167
Query: 828 LCLFEPNRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTVPEGAAEVRDHALGVP 1007
LCL E NRH CT EGAAEVR HA+ VP
Sbjct: 168 LCLAEGNRHVAVEAGAARAVIETAAGLEISAVERALAALELMCTTAEGAAEVRGHAMTVP 227
Query: 1008 MMVQMMGKMNGRGKESAISVLSVIF-----SGGPGSRXXXXXXXXXXXXXXXXMQGECSV 1172
MV +M ++ GRG+E AIS+LS+++ G G ++GEC+
Sbjct: 228 AMVAVMARLAGRGREYAISILSIVYGKAGGGGDSGEEIAVAPAEEVARAVALALEGECTA 287
Query: 1173 RGRRKGAQLLKCLEN-GRLDLSEVG 1244
RGRRKGAQLLK LE GRLDLS+ G
Sbjct: 288 RGRRKGAQLLKTLEEYGRLDLSQNG 312