BLASTX nr result

ID: Coptis21_contig00028219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028219
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285381.1| PREDICTED: ABC transporter G family member 1...    77   6e-22
emb|CAN66605.1| hypothetical protein VITISV_017552 [Vitis vinifera]    77   6e-22
emb|CBI20207.3| unnamed protein product [Vitis vinifera]               76   1e-21
ref|XP_002524270.1| ATP-binding cassette transporter, putative [...    77   2e-19
ref|XP_002317467.1| white-brown-complex ABC transporter family [...    71   2e-16

>ref|XP_002285381.1| PREDICTED: ABC transporter G family member 10 [Vitis vinifera]
          Length = 613

 Score = 77.0 bits (188), Expect(2) = 6e-22
 Identities = 44/79 (55%), Positives = 51/79 (64%), Gaps = 10/79 (12%)
 Frame = -2

Query: 366 QTLGLSSGDAHQNHFVRIRK----------SRFIEEKRLFYPNSRFEEVLILGRRFCNNI 217
           + L +   +A  NH     K          S + EEK  FY NSRFEEVLILG+RFC+ I
Sbjct: 288 ENLAVQPSEAPNNHLALDEKGSKEKKDACASLYREEKPPFYSNSRFEEVLILGQRFCSII 347

Query: 216 FRTKQLFAARMIQALVAGL 160
           FRTKQLFAAR+IQALVAGL
Sbjct: 348 FRTKQLFAARIIQALVAGL 366



 Score = 52.0 bits (123), Expect(2) = 6e-22
 Identities = 30/53 (56%), Positives = 33/53 (62%)
 Frame = -1

Query: 160 VLGTIFMNTNNNDHGKVTLQXXXXXXXXXXXXXXXXXTEGLPIFLQERRILMR 2
           VLGT+F+NTNN D GK+ LQ                 TEGLPIFLQERRILMR
Sbjct: 367 VLGTVFINTNN-DQGKMALQARIGFFAFTLTFLLSSTTEGLPIFLQERRILMR 418


>emb|CAN66605.1| hypothetical protein VITISV_017552 [Vitis vinifera]
          Length = 613

 Score = 77.0 bits (188), Expect(2) = 6e-22
 Identities = 44/79 (55%), Positives = 51/79 (64%), Gaps = 10/79 (12%)
 Frame = -2

Query: 366 QTLGLSSGDAHQNHFVRIRK----------SRFIEEKRLFYPNSRFEEVLILGRRFCNNI 217
           + L +   +A  NH     K          S + EEK  FY NSRFEEVLILG+RFC+ I
Sbjct: 288 ENLAVQPSEAPNNHLALDEKGSEEKKDACASLYREEKPPFYSNSRFEEVLILGQRFCSII 347

Query: 216 FRTKQLFAARMIQALVAGL 160
           FRTKQLFAAR+IQALVAGL
Sbjct: 348 FRTKQLFAARIIQALVAGL 366



 Score = 52.0 bits (123), Expect(2) = 6e-22
 Identities = 30/53 (56%), Positives = 33/53 (62%)
 Frame = -1

Query: 160 VLGTIFMNTNNNDHGKVTLQXXXXXXXXXXXXXXXXXTEGLPIFLQERRILMR 2
           VLGT+F+NTNN D GK+ LQ                 TEGLPIFLQERRILMR
Sbjct: 367 VLGTVFINTNN-DQGKMALQARIGFFAFTLTFLLSSTTEGLPIFLQERRILMR 418


>emb|CBI20207.3| unnamed protein product [Vitis vinifera]
          Length = 537

 Score = 75.9 bits (185), Expect(2) = 1e-21
 Identities = 39/49 (79%), Positives = 43/49 (87%)
 Frame = -2

Query: 306 SRFIEEKRLFYPNSRFEEVLILGRRFCNNIFRTKQLFAARMIQALVAGL 160
           S + EEK  FY NSRFEEVLILG+RFC+ IFRTKQLFAAR+IQALVAGL
Sbjct: 257 SLYREEKPPFYSNSRFEEVLILGQRFCSIIFRTKQLFAARIIQALVAGL 305



 Score = 52.0 bits (123), Expect(2) = 1e-21
 Identities = 30/53 (56%), Positives = 33/53 (62%)
 Frame = -1

Query: 160 VLGTIFMNTNNNDHGKVTLQXXXXXXXXXXXXXXXXXTEGLPIFLQERRILMR 2
           VLGT+F+NTNN D GK+ LQ                 TEGLPIFLQERRILMR
Sbjct: 306 VLGTVFINTNN-DQGKMALQARIGFFAFTLTFLLSSTTEGLPIFLQERRILMR 357


>ref|XP_002524270.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223536461|gb|EEF38109.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 456

 Score = 77.0 bits (188), Expect(2) = 2e-19
 Identities = 39/57 (68%), Positives = 46/57 (80%)
 Frame = -2

Query: 330 NHFVRIRKSRFIEEKRLFYPNSRFEEVLILGRRFCNNIFRTKQLFAARMIQALVAGL 160
           N  ++I  S+F +EK   YPNS  EEVLILG+RFC+NIFRTKQLFA R+IQALVAGL
Sbjct: 173 NSMMKIASSKFHKEKLHSYPNSVSEEVLILGQRFCSNIFRTKQLFATRVIQALVAGL 229



 Score = 43.1 bits (100), Expect(2) = 2e-19
 Identities = 27/53 (50%), Positives = 28/53 (52%)
 Frame = -1

Query: 160 VLGTIFMNTNNNDHGKVTLQXXXXXXXXXXXXXXXXXTEGLPIFLQERRILMR 2
           VLGTIF+N  N   G   LQ                 TEGLPIFLQERRILMR
Sbjct: 230 VLGTIFLNVGNKT-GHAALQTLIGFFAFSLTFLLSSTTEGLPIFLQERRILMR 281


>ref|XP_002317467.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222860532|gb|EEE98079.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 598

 Score = 70.9 bits (172), Expect(2) = 2e-16
 Identities = 37/56 (66%), Positives = 42/56 (75%)
 Frame = -2

Query: 327 HFVRIRKSRFIEEKRLFYPNSRFEEVLILGRRFCNNIFRTKQLFAARMIQALVAGL 160
           H +R       +EK L YPNS   EVLILG+RFC+NIFRTKQLFA R+IQALVAGL
Sbjct: 312 HTMRTPNFNNHQEKPLCYPNSILGEVLILGQRFCSNIFRTKQLFATRVIQALVAGL 367



 Score = 39.3 bits (90), Expect(2) = 2e-16
 Identities = 24/53 (45%), Positives = 28/53 (52%)
 Frame = -1

Query: 160 VLGTIFMNTNNNDHGKVTLQXXXXXXXXXXXXXXXXXTEGLPIFLQERRILMR 2
           +LGTI++N      G+V LQ                 TEGLPIFLQERRIL R
Sbjct: 368 ILGTIYLNVGKKT-GQVALQTRIGFFVFSLTFLLSSTTEGLPIFLQERRILTR 419


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