BLASTX nr result
ID: Coptis21_contig00028211
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00028211 (357 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI22720.3| unnamed protein product [Vitis vinifera] 126 2e-27 ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s... 119 3e-25 emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera] 119 3e-25 emb|CBI26210.3| unnamed protein product [Vitis vinifera] 112 4e-23 emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera] 110 1e-22 >emb|CBI22720.3| unnamed protein product [Vitis vinifera] Length = 524 Score = 126 bits (316), Expect = 2e-27 Identities = 61/89 (68%), Positives = 72/89 (80%) Frame = -3 Query: 310 THYVVIFENILHRLRFAKFSSIVSEQLDKESEELLEGLLQHGRLTLEQIILRALSKRNEG 131 T Y+ +F NILHR+RFAKF +IVSE+LDKE EE+LEGLLQHGRLTLEQI+ RA S ++EG Sbjct: 83 TQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQHGRLTLEQILDRAKSNQSEG 142 Query: 130 DCAIQDVLREKISKLVSEHFVERCPPSEP 44 + +QD LRE KLV HFVERCP SEP Sbjct: 143 EPVVQDALRESFLKLVRAHFVERCPASEP 171 >ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis vinifera] Length = 511 Score = 119 bits (298), Expect = 3e-25 Identities = 60/89 (67%), Positives = 70/89 (78%) Frame = -3 Query: 310 THYVVIFENILHRLRFAKFSSIVSEQLDKESEELLEGLLQHGRLTLEQIILRALSKRNEG 131 T Y+ +F NILHR+RFAKF +IVSE+LDKE EE+LEGLLQHGRLTLEQI+ RA K N+ Sbjct: 78 TQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQHGRLTLEQILDRA--KSNQR 135 Query: 130 DCAIQDVLREKISKLVSEHFVERCPPSEP 44 + +QD LRE KLV HFVERCP SEP Sbjct: 136 EPVVQDALRESFLKLVRAHFVERCPASEP 164 >emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera] Length = 721 Score = 119 bits (298), Expect = 3e-25 Identities = 60/89 (67%), Positives = 70/89 (78%) Frame = -3 Query: 310 THYVVIFENILHRLRFAKFSSIVSEQLDKESEELLEGLLQHGRLTLEQIILRALSKRNEG 131 T Y+ +F NILHR+RFAKF +IVSE+LDKE EE+LEGLLQHGRLTLEQI+ RA K N+ Sbjct: 83 TQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQHGRLTLEQILDRA--KSNQR 140 Query: 130 DCAIQDVLREKISKLVSEHFVERCPPSEP 44 + +QD LRE KLV HFVERCP SEP Sbjct: 141 EPVVQDALRESFLKLVRAHFVERCPASEP 169 >emb|CBI26210.3| unnamed protein product [Vitis vinifera] Length = 517 Score = 112 bits (279), Expect = 4e-23 Identities = 54/114 (47%), Positives = 79/114 (69%), Gaps = 4/114 (3%) Frame = -3 Query: 331 QGGMPKG----THYVVIFENILHRLRFAKFSSIVSEQLDKESEELLEGLLQHGRLTLEQI 164 +GG +G T Y+++F+NILHR+RF K +IVS++LDKE EEL E L+HG LTL+QI Sbjct: 72 EGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAFLKHGWLTLQQI 131 Query: 163 ILRALSKRNEGDCAIQDVLREKISKLVSEHFVERCPPSEPSVRLQDGDNSTRKR 2 + R S +NEG+C +QD LR +KLV+ H+VERCP +P + D + + ++ Sbjct: 132 LDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLVPPDEEKTPARK 185 >emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera] Length = 549 Score = 110 bits (275), Expect = 1e-22 Identities = 53/114 (46%), Positives = 79/114 (69%), Gaps = 4/114 (3%) Frame = -3 Query: 331 QGGMPKG----THYVVIFENILHRLRFAKFSSIVSEQLDKESEELLEGLLQHGRLTLEQI 164 +GG +G T Y+++F+NILHR+RF K +IVS++LDKE E+L E L+HG LTL+QI Sbjct: 72 EGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEKLFEAFLKHGWLTLQQI 131 Query: 163 ILRALSKRNEGDCAIQDVLREKISKLVSEHFVERCPPSEPSVRLQDGDNSTRKR 2 + R S +NEG+C +QD LR +KLV+ H+VERCP +P + D + + ++ Sbjct: 132 LDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLVPPDEEKTPARK 185