BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028211
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22720.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   119   3e-25
emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]   119   3e-25
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              112   4e-23
emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera]   110   1e-22

>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/89 (68%), Positives = 72/89 (80%)
 Frame = -3

Query: 310 THYVVIFENILHRLRFAKFSSIVSEQLDKESEELLEGLLQHGRLTLEQIILRALSKRNEG 131
           T Y+ +F NILHR+RFAKF +IVSE+LDKE EE+LEGLLQHGRLTLEQI+ RA S ++EG
Sbjct: 83  TQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQHGRLTLEQILDRAKSNQSEG 142

Query: 130 DCAIQDVLREKISKLVSEHFVERCPPSEP 44
           +  +QD LRE   KLV  HFVERCP SEP
Sbjct: 143 EPVVQDALRESFLKLVRAHFVERCPASEP 171


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
           vinifera]
          Length = 511

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/89 (67%), Positives = 70/89 (78%)
 Frame = -3

Query: 310 THYVVIFENILHRLRFAKFSSIVSEQLDKESEELLEGLLQHGRLTLEQIILRALSKRNEG 131
           T Y+ +F NILHR+RFAKF +IVSE+LDKE EE+LEGLLQHGRLTLEQI+ RA  K N+ 
Sbjct: 78  TQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQHGRLTLEQILDRA--KSNQR 135

Query: 130 DCAIQDVLREKISKLVSEHFVERCPPSEP 44
           +  +QD LRE   KLV  HFVERCP SEP
Sbjct: 136 EPVVQDALRESFLKLVRAHFVERCPASEP 164


>emb|CAN62168.1| hypothetical protein VITISV_005985 [Vitis vinifera]
          Length = 721

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/89 (67%), Positives = 70/89 (78%)
 Frame = -3

Query: 310 THYVVIFENILHRLRFAKFSSIVSEQLDKESEELLEGLLQHGRLTLEQIILRALSKRNEG 131
           T Y+ +F NILHR+RFAKF +IVSE+LDKE EE+LEGLLQHGRLTLEQI+ RA  K N+ 
Sbjct: 83  TQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQHGRLTLEQILDRA--KSNQR 140

Query: 130 DCAIQDVLREKISKLVSEHFVERCPPSEP 44
           +  +QD LRE   KLV  HFVERCP SEP
Sbjct: 141 EPVVQDALRESFLKLVRAHFVERCPASEP 169


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/114 (47%), Positives = 79/114 (69%), Gaps = 4/114 (3%)
 Frame = -3

Query: 331 QGGMPKG----THYVVIFENILHRLRFAKFSSIVSEQLDKESEELLEGLLQHGRLTLEQI 164
           +GG  +G    T Y+++F+NILHR+RF K  +IVS++LDKE EEL E  L+HG LTL+QI
Sbjct: 72  EGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAFLKHGWLTLQQI 131

Query: 163 ILRALSKRNEGDCAIQDVLREKISKLVSEHFVERCPPSEPSVRLQDGDNSTRKR 2
           + R  S +NEG+C +QD LR   +KLV+ H+VERCP  +P +   D + +  ++
Sbjct: 132 LDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLVPPDEEKTPARK 185


>emb|CAN75989.1| hypothetical protein VITISV_012194 [Vitis vinifera]
          Length = 549

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/114 (46%), Positives = 79/114 (69%), Gaps = 4/114 (3%)
 Frame = -3

Query: 331 QGGMPKG----THYVVIFENILHRLRFAKFSSIVSEQLDKESEELLEGLLQHGRLTLEQI 164
           +GG  +G    T Y+++F+NILHR+RF K  +IVS++LDKE E+L E  L+HG LTL+QI
Sbjct: 72  EGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEKLFEAFLKHGWLTLQQI 131

Query: 163 ILRALSKRNEGDCAIQDVLREKISKLVSEHFVERCPPSEPSVRLQDGDNSTRKR 2
           + R  S +NEG+C +QD LR   +KLV+ H+VERCP  +P +   D + +  ++
Sbjct: 132 LDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLVPPDEEKTPARK 185