BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028210
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591598.1| hypothetical protein MTR_1g089420, partial [...    63   2e-08
ref|XP_003590736.1| hypothetical protein MTR_1g073220 [Medicago ...    62   4e-08
ref|NP_189728.1| uncharacterized protein [Arabidopsis thaliana] ...    62   5e-08
dbj|BAA97081.1| Ta11 non-LTR retroelement protein-like [Arabidop...    62   5e-08
emb|CCA66008.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   1e-07

>ref|XP_003591598.1| hypothetical protein MTR_1g089420, partial [Medicago truncatula]
           gi|355480646|gb|AES61849.1| hypothetical protein
           MTR_1g089420, partial [Medicago truncatula]
          Length = 151

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
 Frame = +1

Query: 34  DLSQLEKNKWERTIFGKLLTPKPNNLDSNHILDQLYMQ-WQPKSAIKISCVATKTFLFEF 210
           D+     + +  ++ GKL T  P N     I  Q+  Q W+ K+ +++  +    FLF F
Sbjct: 22  DIESFGDDIFANSLVGKLWTENPFN---GRIFKQVITQAWRLKNHVEVQDLNKNLFLFRF 78

Query: 211 TDVEDMNFVLKQGPWLINGDIVSVKKWQEDVPLKRMGFHLVTFWVQIHGLPLERVTSSVG 390
           T   D + VLK GPW  + +IV +K    D     +  H   FW +I+ LPL+  + ++ 
Sbjct: 79  TTKRDADTVLKTGPWSFDRNIVVLKHLPGDEQPSDLEMHSSEFWARIYDLPLKLRSDAMA 138

Query: 391 YELGPKIG 414
            +LG  +G
Sbjct: 139 KKLGDVLG 146


>ref|XP_003590736.1| hypothetical protein MTR_1g073220 [Medicago truncatula]
           gi|355479784|gb|AES60987.1| hypothetical protein
           MTR_1g073220 [Medicago truncatula]
          Length = 361

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/137 (24%), Positives = 61/137 (44%)
 Frame = +1

Query: 4   ESDSPTEFKHDLSQLEKNKWERTIFGKLLTPKPNNLDSNHILDQLYMQWQPKSAIKISCV 183
           E+DS   +     Q    + + +I GK+++ K   +  N I + L   W      ++  +
Sbjct: 63  ETDSFIYYDDSDIQERLEECQNSILGKIVSEKA--IHRNSIQNALSNIWCNPKGFRVEHI 120

Query: 184 ATKTFLFEFTDVEDMNFVLKQGPWLINGDIVSVKKWQEDVPLKRMGFHLVTFWVQIHGLP 363
             K F F   + ED   +++  PW      + V  W+ D+  + + F     WVQ+ GLP
Sbjct: 121 GDKLFHFFMDEQEDTKRIIRGNPWFFRNSWLIVHPWRRDIDARSLEFRHAPIWVQLRGLP 180

Query: 364 LERVTSSVGYELGPKIG 414
            +  T  +G ++G  IG
Sbjct: 181 TQCRTKQMGIKIGSSIG 197


>ref|NP_189728.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332644154|gb|AEE77675.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 336

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/114 (28%), Positives = 58/114 (50%)
 Frame = +1

Query: 73  IFGKLLTPKPNNLDSNHILDQLYMQWQPKSAIKISCVATKTFLFEFTDVEDMNFVLKQGP 252
           +FG+ + P+  NL S  I+  +   W     +    +  + F F FT  E +  VL++GP
Sbjct: 134 LFGRPVMPRRQNLRS--IVASMPRIWGQSGLVHGRIMEGRQFHFIFTLEESLETVLRRGP 191

Query: 253 WLINGDIVSVKKWQEDVPLKRMGFHLVTFWVQIHGLPLERVTSSVGYELGPKIG 414
           W  N  ++ +++W+  +PL    F  + FWVQI G+P + +   V   +G  +G
Sbjct: 192 WAFNDWMILLQRWEPQIPL----FPFIPFWVQIRGIPFQFLNRGVVEHIGRALG 241


>dbj|BAA97081.1| Ta11 non-LTR retroelement protein-like [Arabidopsis thaliana]
          Length = 241

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/114 (28%), Positives = 58/114 (50%)
 Frame = +1

Query: 73  IFGKLLTPKPNNLDSNHILDQLYMQWQPKSAIKISCVATKTFLFEFTDVEDMNFVLKQGP 252
           +FG+ + P+  NL S  I+  +   W     +    +  + F F FT  E +  VL++GP
Sbjct: 39  LFGRPVMPRRQNLRS--IVASMPRIWGQSGLVHGRIMEGRQFHFIFTLEESLETVLRRGP 96

Query: 253 WLINGDIVSVKKWQEDVPLKRMGFHLVTFWVQIHGLPLERVTSSVGYELGPKIG 414
           W  N  ++ +++W+  +PL    F  + FWVQI G+P + +   V   +G  +G
Sbjct: 97  WAFNDWMILLQRWEPQIPL----FPFIPFWVQIRGIPFQFLNRGVVEHIGRALG 146


>emb|CCA66008.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 678

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/121 (27%), Positives = 61/121 (50%)
 Frame = +1

Query: 52  KNKWERTIFGKLLTPKPNNLDSNHILDQLYMQWQPKSAIKISCVATKTFLFEFTDVEDMN 231
           ++ W  ++  KL   +   L  + ++ +L  +W  K  I ++ V    ++  F ++ED +
Sbjct: 133 RHPWRNSLIIKLFDRR---LSYDILVRRLKYKWNLKGDIALTDVGHAYYVVRFNNMEDYD 189

Query: 232 FVLKQGPWLINGDIVSVKKWQEDVPLKRMGFHLVTFWVQIHGLPLERVTSSVGYELGPKI 411
           FVL QGPWLI    ++++KW  +    +     +T WV+I  L +E       + +G KI
Sbjct: 190 FVLTQGPWLIGDSYLTIRKWVPNFVSDQEPIKKLTAWVRIPHLSVEYFDKQFLHSIGSKI 249

Query: 412 G 414
           G
Sbjct: 250 G 250