BLASTX nr result

ID: Coptis21_contig00028198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028198
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3...    77   3e-18
ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...    74   6e-18
emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]    74   6e-18
emb|CBI26749.3| unnamed protein product [Vitis vinifera]               74   6e-18
ref|XP_003617730.1| Multidrug resistance protein ABC transporter...    75   1e-17

>ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1490

 Score = 76.6 bits (187), Expect(2) = 3e-18
 Identities = 38/45 (84%), Positives = 44/45 (97%)
 Frame = -3

Query: 403  LVLDEATSSVNTATDNLIQITLKKHFSESTVITIAHRITSVVDSD 269
            LVLDEAT+SV+TATDNLIQ TL++HFS+STVITIAHRITSV+DSD
Sbjct: 1398 LVLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVLDSD 1442



 Score = 40.0 bits (92), Expect(2) = 3e-18
 Identities = 18/33 (54%), Positives = 27/33 (81%)
 Frame = -1

Query: 243  GLIVEHDTPKTLLESKSSAFSKLVDQHVRASRN 145
            GLI E+DTP TLLE+KSS+F++LV ++   S++
Sbjct: 1450 GLIEEYDTPTTLLENKSSSFAQLVAEYTMRSKS 1482


>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score = 74.3 bits (181), Expect(2) = 6e-18
 Identities = 37/45 (82%), Positives = 43/45 (95%)
 Frame = -3

Query: 403  LVLDEATSSVNTATDNLIQITLKKHFSESTVITIAHRITSVVDSD 269
            LVLDEAT+SV+TATDNLIQ TL++HF +STVITIAHRITSV+DSD
Sbjct: 1400 LVLDEATASVDTATDNLIQQTLRQHFVDSTVITIAHRITSVLDSD 1444



 Score = 41.2 bits (95), Expect(2) = 6e-18
 Identities = 19/34 (55%), Positives = 27/34 (79%)
 Frame = -1

Query: 246  NGLIVEHDTPKTLLESKSSAFSKLVDQHVRASRN 145
            +GLI EHDTP  LLE+KSS+F+KLV ++   S++
Sbjct: 1451 HGLIEEHDTPARLLENKSSSFAKLVAEYTVRSKS 1484


>emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]
          Length = 1458

 Score = 74.3 bits (181), Expect(2) = 6e-18
 Identities = 37/45 (82%), Positives = 43/45 (95%)
 Frame = -3

Query: 403  LVLDEATSSVNTATDNLIQITLKKHFSESTVITIAHRITSVVDSD 269
            LVLDEAT+SV+TATDNLIQ TL++HF +STVITIAHRITSV+DSD
Sbjct: 1373 LVLDEATASVDTATDNLIQQTLRQHFVDSTVITIAHRITSVLDSD 1417



 Score = 41.2 bits (95), Expect(2) = 6e-18
 Identities = 19/34 (55%), Positives = 27/34 (79%)
 Frame = -1

Query: 246  NGLIVEHDTPKTLLESKSSAFSKLVDQHVRASRN 145
            +GLI EHDTP  LLE+KSS+F+KLV ++   S++
Sbjct: 1424 HGLIEEHDTPARLLENKSSSFAKLVAEYTVRSKS 1457


>emb|CBI26749.3| unnamed protein product [Vitis vinifera]
          Length = 1269

 Score = 74.3 bits (181), Expect(2) = 6e-18
 Identities = 37/45 (82%), Positives = 43/45 (95%)
 Frame = -3

Query: 403  LVLDEATSSVNTATDNLIQITLKKHFSESTVITIAHRITSVVDSD 269
            LVLDEAT+SV+TATDNLIQ TL++HF +STVITIAHRITSV+DSD
Sbjct: 1184 LVLDEATASVDTATDNLIQQTLRQHFVDSTVITIAHRITSVLDSD 1228



 Score = 41.2 bits (95), Expect(2) = 6e-18
 Identities = 19/34 (55%), Positives = 27/34 (79%)
 Frame = -1

Query: 246  NGLIVEHDTPKTLLESKSSAFSKLVDQHVRASRN 145
            +GLI EHDTP  LLE+KSS+F+KLV ++   S++
Sbjct: 1235 HGLIEEHDTPARLLENKSSSFAKLVAEYTVRSKS 1268


>ref|XP_003617730.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355519065|gb|AET00689.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1521

 Score = 75.5 bits (184), Expect(2) = 1e-17
 Identities = 37/45 (82%), Positives = 44/45 (97%)
 Frame = -3

Query: 403  LVLDEATSSVNTATDNLIQITLKKHFSESTVITIAHRITSVVDSD 269
            LVLDEAT+SV+TATDNLIQ TL++HF++STVITIAHRITSV+DSD
Sbjct: 1435 LVLDEATASVDTATDNLIQQTLRQHFTDSTVITIAHRITSVLDSD 1479



 Score = 38.9 bits (89), Expect(2) = 1e-17
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = -1

Query: 243  GLIVEHDTPKTLLESKSSAFSKLVDQHVRASRN 145
            GLI E+D+P TLLE KSS+F+KLV ++   S +
Sbjct: 1487 GLIEEYDSPTTLLEDKSSSFAKLVAEYTMRSNS 1519


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