BLASTX nr result
ID: Coptis21_contig00028198
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00028198 (405 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3... 77 3e-18 ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3... 74 6e-18 emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera] 74 6e-18 emb|CBI26749.3| unnamed protein product [Vitis vinifera] 74 6e-18 ref|XP_003617730.1| Multidrug resistance protein ABC transporter... 75 1e-17 >ref|XP_003551345.1| PREDICTED: ABC transporter C family member 3-like [Glycine max] Length = 1490 Score = 76.6 bits (187), Expect(2) = 3e-18 Identities = 38/45 (84%), Positives = 44/45 (97%) Frame = -3 Query: 403 LVLDEATSSVNTATDNLIQITLKKHFSESTVITIAHRITSVVDSD 269 LVLDEAT+SV+TATDNLIQ TL++HFS+STVITIAHRITSV+DSD Sbjct: 1398 LVLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVLDSD 1442 Score = 40.0 bits (92), Expect(2) = 3e-18 Identities = 18/33 (54%), Positives = 27/33 (81%) Frame = -1 Query: 243 GLIVEHDTPKTLLESKSSAFSKLVDQHVRASRN 145 GLI E+DTP TLLE+KSS+F++LV ++ S++ Sbjct: 1450 GLIEEYDTPTTLLENKSSSFAQLVAEYTMRSKS 1482 >ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera] Length = 1485 Score = 74.3 bits (181), Expect(2) = 6e-18 Identities = 37/45 (82%), Positives = 43/45 (95%) Frame = -3 Query: 403 LVLDEATSSVNTATDNLIQITLKKHFSESTVITIAHRITSVVDSD 269 LVLDEAT+SV+TATDNLIQ TL++HF +STVITIAHRITSV+DSD Sbjct: 1400 LVLDEATASVDTATDNLIQQTLRQHFVDSTVITIAHRITSVLDSD 1444 Score = 41.2 bits (95), Expect(2) = 6e-18 Identities = 19/34 (55%), Positives = 27/34 (79%) Frame = -1 Query: 246 NGLIVEHDTPKTLLESKSSAFSKLVDQHVRASRN 145 +GLI EHDTP LLE+KSS+F+KLV ++ S++ Sbjct: 1451 HGLIEEHDTPARLLENKSSSFAKLVAEYTVRSKS 1484 >emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera] Length = 1458 Score = 74.3 bits (181), Expect(2) = 6e-18 Identities = 37/45 (82%), Positives = 43/45 (95%) Frame = -3 Query: 403 LVLDEATSSVNTATDNLIQITLKKHFSESTVITIAHRITSVVDSD 269 LVLDEAT+SV+TATDNLIQ TL++HF +STVITIAHRITSV+DSD Sbjct: 1373 LVLDEATASVDTATDNLIQQTLRQHFVDSTVITIAHRITSVLDSD 1417 Score = 41.2 bits (95), Expect(2) = 6e-18 Identities = 19/34 (55%), Positives = 27/34 (79%) Frame = -1 Query: 246 NGLIVEHDTPKTLLESKSSAFSKLVDQHVRASRN 145 +GLI EHDTP LLE+KSS+F+KLV ++ S++ Sbjct: 1424 HGLIEEHDTPARLLENKSSSFAKLVAEYTVRSKS 1457 >emb|CBI26749.3| unnamed protein product [Vitis vinifera] Length = 1269 Score = 74.3 bits (181), Expect(2) = 6e-18 Identities = 37/45 (82%), Positives = 43/45 (95%) Frame = -3 Query: 403 LVLDEATSSVNTATDNLIQITLKKHFSESTVITIAHRITSVVDSD 269 LVLDEAT+SV+TATDNLIQ TL++HF +STVITIAHRITSV+DSD Sbjct: 1184 LVLDEATASVDTATDNLIQQTLRQHFVDSTVITIAHRITSVLDSD 1228 Score = 41.2 bits (95), Expect(2) = 6e-18 Identities = 19/34 (55%), Positives = 27/34 (79%) Frame = -1 Query: 246 NGLIVEHDTPKTLLESKSSAFSKLVDQHVRASRN 145 +GLI EHDTP LLE+KSS+F+KLV ++ S++ Sbjct: 1235 HGLIEEHDTPARLLENKSSSFAKLVAEYTVRSKS 1268 >ref|XP_003617730.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] gi|355519065|gb|AET00689.1| Multidrug resistance protein ABC transporter family [Medicago truncatula] Length = 1521 Score = 75.5 bits (184), Expect(2) = 1e-17 Identities = 37/45 (82%), Positives = 44/45 (97%) Frame = -3 Query: 403 LVLDEATSSVNTATDNLIQITLKKHFSESTVITIAHRITSVVDSD 269 LVLDEAT+SV+TATDNLIQ TL++HF++STVITIAHRITSV+DSD Sbjct: 1435 LVLDEATASVDTATDNLIQQTLRQHFTDSTVITIAHRITSVLDSD 1479 Score = 38.9 bits (89), Expect(2) = 1e-17 Identities = 18/33 (54%), Positives = 25/33 (75%) Frame = -1 Query: 243 GLIVEHDTPKTLLESKSSAFSKLVDQHVRASRN 145 GLI E+D+P TLLE KSS+F+KLV ++ S + Sbjct: 1487 GLIEEYDSPTTLLEDKSSSFAKLVAEYTMRSNS 1519