BLASTX nr result

ID: Coptis21_contig00028191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028191
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|1...   410   e-112
ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 ho...   405   e-111
ref|XP_002322204.1| predicted protein [Populus trichocarpa] gi|2...   404   e-111
ref|XP_002511315.1| thyroid hormone receptor interactor, putativ...   399   e-109
ref|XP_003522403.1| PREDICTED: pachytene checkpoint protein 2 ho...   389   e-106

>ref|XP_002318075.1| predicted protein [Populus trichocarpa] gi|118485393|gb|ABK94553.1|
           unknown [Populus trichocarpa]
           gi|222858748|gb|EEE96295.1| predicted protein [Populus
           trichocarpa]
          Length = 465

 Score =  410 bits (1054), Expect = e-112
 Identities = 203/237 (85%), Positives = 215/237 (90%)
 Frame = +1

Query: 1   VSVPHDDTFLLENVQRICICDTDEWVENHDILLFWQVKPAVHVFQLXXXXXXXXXXXXXQ 180
           + VP DD FL ENVQRIC+CDTDEWV NHDILLFWQVKP VHVFQL             Q
Sbjct: 86  IPVPFDDQFLFENVQRICVCDTDEWVTNHDILLFWQVKPVVHVFQLSEEGPCEELGGDGQ 145

Query: 181 LSTFSGWILPAKEFDGMWESLIYEPGLKQRLLRYAASALLFTDKGVDPFLVTWNRIILLH 360
           LS+F+ WILPAKEFDGMWESLIYE GLKQRLLRYAASAL FT+KGVDPFLV+WNR+ILLH
Sbjct: 146 LSSFNEWILPAKEFDGMWESLIYEFGLKQRLLRYAASALFFTEKGVDPFLVSWNRLILLH 205

Query: 361 GPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQE 540
           GPPGTGKTSLCKALAQKLSIRF+SRYPQCQL+EVNAHSLFSKWFSESGKLVAKLFQKIQE
Sbjct: 206 GPPGTGKTSLCKALAQKLSIRFNSRYPQCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQE 265

Query: 541 MVEEENSLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 711
           M+EEEN+LVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLK+SPNVII
Sbjct: 266 MIEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKTSPNVII 322


>ref|XP_002280358.1| PREDICTED: pachytene checkpoint protein 2 homolog [Vitis vinifera]
           gi|297733699|emb|CBI14946.3| unnamed protein product
           [Vitis vinifera]
          Length = 455

 Score =  405 bits (1042), Expect = e-111
 Identities = 203/237 (85%), Positives = 215/237 (90%)
 Frame = +1

Query: 1   VSVPHDDTFLLENVQRICICDTDEWVENHDILLFWQVKPAVHVFQLXXXXXXXXXXXXXQ 180
           V V  DD FL+ENVQRICIC+TDEWVE HD+LLFWQVKP VHVFQL             Q
Sbjct: 76  VPVSLDDPFLVENVQRICICETDEWVEKHDVLLFWQVKPVVHVFQLSEEGPCEESSGDGQ 135

Query: 181 LSTFSGWILPAKEFDGMWESLIYEPGLKQRLLRYAASALLFTDKGVDPFLVTWNRIILLH 360
           LS F+ WILPAKEFDG+WESLIYEPGLKQRLLRYAASALLFT+KGV+PFLV+WNRIILLH
Sbjct: 136 LSIFNEWILPAKEFDGLWESLIYEPGLKQRLLRYAASALLFTEKGVNPFLVSWNRIILLH 195

Query: 361 GPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQE 540
           GPPGTGKTSLCKALAQKLSIRF++RYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQE
Sbjct: 196 GPPGTGKTSLCKALAQKLSIRFNTRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQE 255

Query: 541 MVEEENSLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 711
           MVEEE +LVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQ+DKLKSSPNVII
Sbjct: 256 MVEEETNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSSPNVII 312


>ref|XP_002322204.1| predicted protein [Populus trichocarpa] gi|222869200|gb|EEF06331.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  404 bits (1039), Expect = e-111
 Identities = 201/237 (84%), Positives = 214/237 (90%)
 Frame = +1

Query: 1   VSVPHDDTFLLENVQRICICDTDEWVENHDILLFWQVKPAVHVFQLXXXXXXXXXXXXXQ 180
           + VP DD FL ENVQRI +CDTDEWV NHDILLFWQVKP VHVFQL             Q
Sbjct: 37  IPVPIDDQFLFENVQRISVCDTDEWVNNHDILLFWQVKPVVHVFQLSEEGPCEELSGDGQ 96

Query: 181 LSTFSGWILPAKEFDGMWESLIYEPGLKQRLLRYAASALLFTDKGVDPFLVTWNRIILLH 360
           LS+F+ WILPA EFDGMWESLIYE GLKQRLLRYAASALLFT+KGV+PFLV+WNR+ILLH
Sbjct: 97  LSSFNEWILPAMEFDGMWESLIYESGLKQRLLRYAASALLFTEKGVNPFLVSWNRLILLH 156

Query: 361 GPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQE 540
           GPPGTGKTSLCKALAQKLSIRF+SRYPQCQL+EVNAHSLFSKWFSESGKLVAKLFQKIQE
Sbjct: 157 GPPGTGKTSLCKALAQKLSIRFNSRYPQCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQE 216

Query: 541 MVEEENSLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 711
           M+EEEN+LVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLK+SPNVII
Sbjct: 217 MIEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKASPNVII 273


>ref|XP_002511315.1| thyroid hormone receptor interactor, putative [Ricinus communis]
           gi|223550430|gb|EEF51917.1| thyroid hormone receptor
           interactor, putative [Ricinus communis]
          Length = 460

 Score =  399 bits (1024), Expect = e-109
 Identities = 198/237 (83%), Positives = 214/237 (90%)
 Frame = +1

Query: 1   VSVPHDDTFLLENVQRICICDTDEWVENHDILLFWQVKPAVHVFQLXXXXXXXXXXXXXQ 180
           + VP DD +L +NVQRICICD++EW +NH+ILLFWQVKP VHVFQL             +
Sbjct: 82  IPVPVDDPYLSDNVQRICICDSEEWAKNHEILLFWQVKPIVHVFQLSEEGPCEELSGDGE 141

Query: 181 LSTFSGWILPAKEFDGMWESLIYEPGLKQRLLRYAASALLFTDKGVDPFLVTWNRIILLH 360
           LS+F+ WILPAKEFDGMWESLIYE GLKQRLLRYAASALLFT+K VDPFLV+WNRI+LLH
Sbjct: 142 LSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKRVDPFLVSWNRIVLLH 201

Query: 361 GPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQE 540
           GPPGTGKTSLCKALAQKLSIRF+SRYPQCQLVEVNAHSLFSKWFSESGKLVA+LFQKIQE
Sbjct: 202 GPPGTGKTSLCKALAQKLSIRFNSRYPQCQLVEVNAHSLFSKWFSESGKLVARLFQKIQE 261

Query: 541 MVEEENSLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 711
           MVEEEN+LVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLK SPNVII
Sbjct: 262 MVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKCSPNVII 318


>ref|XP_003522403.1| PREDICTED: pachytene checkpoint protein 2 homolog [Glycine max]
          Length = 448

 Score =  389 bits (1000), Expect = e-106
 Identities = 199/239 (83%), Positives = 212/239 (88%), Gaps = 2/239 (0%)
 Frame = +1

Query: 1   VSVPHDDTFLLENVQRICIC--DTDEWVENHDILLFWQVKPAVHVFQLXXXXXXXXXXXX 174
           + VP DD FL +NVQRIC+C  DTDE + N ++LLFWQVKP VHVFQL            
Sbjct: 68  IPVPLDDAFLADNVQRICVCGCDTDEGMHNDNVLLFWQVKPVVHVFQLSEEGPCEDISSD 127

Query: 175 XQLSTFSGWILPAKEFDGMWESLIYEPGLKQRLLRYAASALLFTDKGVDPFLVTWNRIIL 354
            Q S+F+ WILPAKEFDGMWESLIYE GLKQRLLRYAASALLFT+KGVDPFLV+WNRIIL
Sbjct: 128 GQSSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKGVDPFLVSWNRIIL 187

Query: 355 LHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLFSKWFSESGKLVAKLFQKI 534
           LHGPPGTGKTSLCKALAQKLSIRF+SRYPQ QLVEVNAHSLFSKWFSESGKLVAKLFQKI
Sbjct: 188 LHGPPGTGKTSLCKALAQKLSIRFNSRYPQAQLVEVNAHSLFSKWFSESGKLVAKLFQKI 247

Query: 535 QEMVEEENSLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 711
           QEMVEEE++LVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII
Sbjct: 248 QEMVEEESNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVII 306


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