BLASTX nr result

ID: Coptis21_contig00028190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028190
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267644.2| PREDICTED: uncharacterized protein LOC100253...   161   6e-38
emb|CBI37231.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_002320616.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_002521162.1| conserved hypothetical protein [Ricinus comm...   155   3e-36
gb|AFK45296.1| unknown [Lotus japonicus]                              155   4e-36

>ref|XP_002267644.2| PREDICTED: uncharacterized protein LOC100253269 [Vitis vinifera]
          Length = 328

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/105 (71%), Positives = 81/105 (77%)
 Frame = -2

Query: 419 VPFATDGNLPKFXXXXXXXXXXXXXXXKRLWQLVPVNASEWSRWLDEQKKLANVSPESPV 240
           VPF TDG LP F               KRLWQLVPV  SEWS+WLDEQKKLA VSPESPV
Sbjct: 223 VPFVTDGKLPSFEYEESEEMKDITTKRKRLWQLVPVYVSEWSKWLDEQKKLAGVSPESPV 282

Query: 239 YISLRLDGRVRGSGLGYPPWNALVAQLPPVKGMWSGLFDGFDGRV 105
           Y+SLR+DGRVRGSG+GYPPWNA VAQLPP+KGMW+GL DG DGRV
Sbjct: 283 YLSLRMDGRVRGSGVGYPPWNAFVAQLPPIKGMWTGLLDGMDGRV 327


>emb|CBI37231.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/105 (71%), Positives = 81/105 (77%)
 Frame = -2

Query: 419 VPFATDGNLPKFXXXXXXXXXXXXXXXKRLWQLVPVNASEWSRWLDEQKKLANVSPESPV 240
           VPF TDG LP F               KRLWQLVPV  SEWS+WLDEQKKLA VSPESPV
Sbjct: 241 VPFVTDGKLPSFEYEESEEMKDITTKRKRLWQLVPVYVSEWSKWLDEQKKLAGVSPESPV 300

Query: 239 YISLRLDGRVRGSGLGYPPWNALVAQLPPVKGMWSGLFDGFDGRV 105
           Y+SLR+DGRVRGSG+GYPPWNA VAQLPP+KGMW+GL DG DGRV
Sbjct: 301 YLSLRMDGRVRGSGVGYPPWNAFVAQLPPIKGMWTGLLDGMDGRV 345


>ref|XP_002320616.1| predicted protein [Populus trichocarpa] gi|222861389|gb|EEE98931.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  158 bits (399), Expect = 5e-37
 Identities = 74/105 (70%), Positives = 80/105 (76%)
 Frame = -2

Query: 419 VPFATDGNLPKFXXXXXXXXXXXXXXXKRLWQLVPVNASEWSRWLDEQKKLANVSPESPV 240
           VPFA++GNLP F               KRLWQL P+  SEWS WLDEQKKLA VSPESPV
Sbjct: 196 VPFASNGNLPSFEFDEGEEMKELTTKRKRLWQLAPIYVSEWSNWLDEQKKLAGVSPESPV 255

Query: 239 YISLRLDGRVRGSGLGYPPWNALVAQLPPVKGMWSGLFDGFDGRV 105
           Y+SLR+DGRVRGSG+GYPPWNA VAQLPP KGMWSGL DG DGRV
Sbjct: 256 YLSLRMDGRVRGSGVGYPPWNAFVAQLPPSKGMWSGLLDGMDGRV 300


>ref|XP_002521162.1| conserved hypothetical protein [Ricinus communis]
           gi|223539731|gb|EEF41313.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 331

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/105 (70%), Positives = 78/105 (74%)
 Frame = -2

Query: 419 VPFATDGNLPKFXXXXXXXXXXXXXXXKRLWQLVPVNASEWSRWLDEQKKLANVSPESPV 240
           VPFATDGN P F               KRLWQL P   SEWS+WLDEQK +A VSPESPV
Sbjct: 226 VPFATDGNFPNFEFEESEEMKEITSKRKRLWQLNPTFVSEWSKWLDEQKNMAGVSPESPV 285

Query: 239 YISLRLDGRVRGSGLGYPPWNALVAQLPPVKGMWSGLFDGFDGRV 105
           Y+SLRLDGRVRGSG+GYPPWNA VAQLP VKGMWSGL DG DGRV
Sbjct: 286 YLSLRLDGRVRGSGVGYPPWNAFVAQLPQVKGMWSGLLDGMDGRV 330


>gb|AFK45296.1| unknown [Lotus japonicus]
          Length = 334

 Score =  155 bits (391), Expect = 4e-36
 Identities = 74/105 (70%), Positives = 78/105 (74%)
 Frame = -2

Query: 419 VPFATDGNLPKFXXXXXXXXXXXXXXXKRLWQLVPVNASEWSRWLDEQKKLANVSPESPV 240
           VPF TDGN P                 KRLWQL PV  +EWS WLDEQKKLA VS ESPV
Sbjct: 230 VPFVTDGNSPDLEFEETEEMKQLATRRKRLWQLTPVYITEWSNWLDEQKKLAGVSSESPV 289

Query: 239 YISLRLDGRVRGSGLGYPPWNALVAQLPPVKGMWSGLFDGFDGRV 105
           Y+SLRLDGRVRGSG+GYPPWNA VAQLPPVKGMW+GL DGFDGRV
Sbjct: 290 YLSLRLDGRVRGSGVGYPPWNAFVAQLPPVKGMWTGLLDGFDGRV 334


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