BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028183
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06
ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...    55   5e-06
emb|CBI33242.3| unnamed protein product [Vitis vinifera]               55   5e-06
ref|XP_002329818.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Glycine max]
          Length = 486

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
 Frame = -3

Query: 277 KRYYTSKEAY-LLYNKLSTL-NENHSVEPILNHWILTQGNSLKQRDIFVSIDYLRHFRKY 104
           + YYTS+     LY+K+S L N N SV P+L+ W+  +GN L+  ++   I  LR   ++
Sbjct: 11  RSYYTSRSKKPSLYSKISPLGNPNTSVVPVLDDWVF-KGNKLRVAELQRIIRDLRKRSRF 69

Query: 103 EHALQLLEWTEKRGLLRLSNREYAKCIDLVRK 8
             ALQ+ EW   +G+   S  EYA  +DL+ K
Sbjct: 70  SQALQISEWMHNKGVCIFSPTEYAVHLDLIGK 101


>ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|222848105|gb|EEE85652.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = -3

Query: 277 KRYYTSK-EAYLLYNKLSTLNENHSVEPILNHWILTQGNSLKQRDIFVSIDYLRHFRKYE 101
           + YYT+K     LY+K+S L    S+EP L+ W+ + GN ++  ++   I  LR  +++ 
Sbjct: 20  RSYYTNKANKATLYSKISPLGSTPSLEPELDSWVRS-GNKVRVAELQRIIHDLRKRKRFS 78

Query: 100 HALQLLEWTEKRGLLRLSNREYAKCIDLV 14
           HALQ+ EW  K+ +   S  E+A  +DL+
Sbjct: 79  HALQVSEWMHKKDICIFSPSEHAVQLDLI 107


>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
 Frame = -3

Query: 277 KRYYTSKEAYL-LYNKLSTLNE-NHSVEPILNHWILTQGNSLKQRDIFVSIDYLRHFRKY 104
           + YYTS+   + LYNK+S L + N SV P L++W+   GN +   ++   I  LR  +++
Sbjct: 29  RTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWV-QNGNKVWVAELQRIIHDLRKRKRF 87

Query: 103 EHALQLLEWTEKRGLLRLSNREYAKCIDLVRKSR 2
             AL++ EW  K+G+   S  E+A  +DL+ + R
Sbjct: 88  SQALEISEWMSKKGICAFSPTEHAVQLDLIGRVR 121


>emb|CBI33242.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
 Frame = -3

Query: 277 KRYYTSKEAYL-LYNKLSTLNE-NHSVEPILNHWILTQGNSLKQRDIFVSIDYLRHFRKY 104
           + YYTS+   + LYNK+S L + N SV P L++W+   GN +   ++   I  LR  +++
Sbjct: 29  RTYYTSRYGKISLYNKISPLGDPNTSVVPELDNWV-QNGNKVWVAELQRIIHDLRKRKRF 87

Query: 103 EHALQLLEWTEKRGLLRLSNREYAKCIDLVRKSR 2
             AL++ EW  K+G+   S  E+A  +DL+ + R
Sbjct: 88  SQALEISEWMSKKGICAFSPTEHAVQLDLIGRVR 121


>ref|XP_002329818.1| predicted protein [Populus trichocarpa] gi|222870880|gb|EEF08011.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = -3

Query: 277 KRYYTSK-EAYLLYNKLSTLNENHSVEPILNHWILTQGNSLKQRDIFVSIDYLRHFRKYE 101
           + YYT+K     LY+KLS L    S+EP L+ WI   G  +K  ++   I   R  +++ 
Sbjct: 20  RSYYTNKTNKATLYSKLSPLGSTPSLEPELDSWI-QNGKKVKVAELQRIIHDFRMRKRFT 78

Query: 100 HALQLLEWTEKRGLLRLSNREYAKCIDLV 14
           HALQ+ EW  K+G+   S  ++A  +DL+
Sbjct: 79  HALQVSEWMNKKGICIFSPSQHAVQLDLI 107