BLASTX nr result

ID: Coptis21_contig00028170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028170
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68956.1| hypothetical protein VITISV_014193 [Vitis vinifera]    86   3e-15
ref|XP_002264384.1| PREDICTED: cadmium-induced protein AS8 [Viti...    82   4e-14
ref|XP_002326763.1| predicted protein [Populus trichocarpa] gi|1...    79   3e-13
ref|NP_193642.1| cadmium-induced protein AS8 [Arabidopsis thalia...    79   4e-13
ref|XP_002519865.1| Cadmium-induced protein AS8, putative [Ricin...    76   3e-12

>emb|CAN68956.1| hypothetical protein VITISV_014193 [Vitis vinifera]
          Length = 877

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/90 (51%), Positives = 49/90 (54%)
 Frame = +2

Query: 44  GNTVLMIIKGLFRRYERWNPVHPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 223
           G  +LMIIKGLFRRYERWNPVHPTS                                   
Sbjct: 651 GILILMIIKGLFRRYERWNPVHPTSGAFWGMGIGIGCGVGWGPGFGPEVIGYVGAGCGVG 710

Query: 224 FSVGITFAGVGIGLPTNFLIEMPYNAIVAT 313
           FSVGIT AGVGIGLP N LIE+PYNA +AT
Sbjct: 711 FSVGITLAGVGIGLPANCLIEVPYNAFIAT 740


>ref|XP_002264384.1| PREDICTED: cadmium-induced protein AS8 [Vitis vinifera]
           gi|296085130|emb|CBI28625.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 44/85 (51%), Positives = 46/85 (54%)
 Frame = +2

Query: 59  MIIKGLFRRYERWNPVHPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSVGI 238
           MIIKGLFRRYERWNPVHPTS                                   FSVGI
Sbjct: 1   MIIKGLFRRYERWNPVHPTSGAFWGMGIGIGCGVGWGPGFGPEVIGYVGAGCGVGFSVGI 60

Query: 239 TFAGVGIGLPTNFLIEMPYNAIVAT 313
           T AGVGIGLP N LIE+PYNA +AT
Sbjct: 61  TLAGVGIGLPANCLIEVPYNAFIAT 85


>ref|XP_002326763.1| predicted protein [Populus trichocarpa] gi|118487666|gb|ABK95658.1|
           unknown [Populus trichocarpa]
           gi|222834085|gb|EEE72562.1| predicted protein [Populus
           trichocarpa]
          Length = 176

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/85 (49%), Positives = 45/85 (52%)
 Frame = +2

Query: 59  MIIKGLFRRYERWNPVHPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSVGI 238
           MIIKGL RRYERWNPVHPTS                                   FSVGI
Sbjct: 1   MIIKGLCRRYERWNPVHPTSGAFWGMGIGIGCGVGWGPGFGPEAIGYVGAGCGVGFSVGI 60

Query: 239 TFAGVGIGLPTNFLIEMPYNAIVAT 313
           TF G GIGLP N+L ++PYNAIVAT
Sbjct: 61  TFVGFGIGLPANYLFQVPYNAIVAT 85


>ref|NP_193642.1| cadmium-induced protein AS8 [Arabidopsis thaliana]
           gi|1168863|sp|P42735.1|CDI8_ARATH RecName:
           Full=Cadmium-induced protein AS8
           gi|534902|emb|CAA85363.1| cadmium induced protein
           [Arabidopsis thaliana] gi|2832634|emb|CAA16763.1|
           cadmium-induced protein [Arabidopsis thaliana]
           gi|7268702|emb|CAB78909.1| cadmium-induced protein
           [Arabidopsis thaliana] gi|18176472|gb|AAL60050.1|
           AT4g19070/F13C5_230 [Arabidopsis thaliana]
           gi|22655438|gb|AAM98311.1| At4g19070/F13C5_230
           [Arabidopsis thaliana] gi|332658736|gb|AEE84136.1|
           cadmium-induced protein AS8 [Arabidopsis thaliana]
          Length = 171

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/87 (47%), Positives = 46/87 (52%)
 Frame = +2

Query: 53  VLMIIKGLFRRYERWNPVHPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSV 232
           VLMIIKG+FRRYE+WNPVHPT                                    FSV
Sbjct: 2   VLMIIKGIFRRYEKWNPVHPTYGAFWGMGIGIGCGVGWGPGFGPEVIGYVGAGCGVGFSV 61

Query: 233 GITFAGVGIGLPTNFLIEMPYNAIVAT 313
           GIT AG+GIGLPTNFL+  PYN + AT
Sbjct: 62  GITLAGLGIGLPTNFLLAAPYNTVEAT 88


>ref|XP_002519865.1| Cadmium-induced protein AS8, putative [Ricinus communis]
           gi|223540911|gb|EEF42469.1| Cadmium-induced protein AS8,
           putative [Ricinus communis]
          Length = 184

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/85 (48%), Positives = 44/85 (51%)
 Frame = +2

Query: 59  MIIKGLFRRYERWNPVHPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSVGI 238
           MIIKGLFRRYERWNPVHPT                                    FSVGI
Sbjct: 1   MIIKGLFRRYERWNPVHPTFGAFWGMGVGFGCGVGWGPGFGPEVVGYVGAGCGVGFSVGI 60

Query: 239 TFAGVGIGLPTNFLIEMPYNAIVAT 313
           T  G+GIGLP N + E+PYNAIVAT
Sbjct: 61  TLFGLGIGLPANNIFEVPYNAIVAT 85


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