BLASTX nr result

ID: Coptis21_contig00028148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028148
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD25641.1| En/Spm-like transposon protein [Arabidopsis thali...    65   8e-09
gb|AAC97238.1| En/Spm-like transposon protein [Arabidopsis thali...    60   2e-07

>gb|AAD25641.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 531

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = -1

Query: 215 RFIKDVLLDYYTFRIPIFNCYWANVRNGVKVEDGLTLVNLHQGQ-RLQKEPFITLS 51
           R +  +LLDY  F IPIF C WAN+ NGVK EDG TLVNL+Q Q    ++P+I  S
Sbjct: 74  RVVDIILLDYNVFYIPIFRCQWANIGNGVKEEDGFTLVNLNQSQVSFARDPYILAS 129


>gb|AAC97238.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 781

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/51 (58%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
 Frame = -1

Query: 200 VLLDYYTFRIPIFNCYWANVRNGVKVEDGLTLVNLHQGQ-RLQKEPFITLS 51
           +LLDY  F +PIF C WA   NGVKVEDG TLVNL+  Q    K+PFI  S
Sbjct: 26  ILLDYNVFYVPIFRCQWAVRGNGVKVEDGFTLVNLNHSQVSFLKDPFILAS 76


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