BLASTX nr result

ID: Coptis21_contig00028147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028147
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548210.1| PREDICTED: E3 ubiquitin-protein ligase XBAT3...   171   4e-46
ref|XP_003534009.1| PREDICTED: E3 ubiquitin-protein ligase XBAT3...   171   1e-45
ref|XP_002278915.1| PREDICTED: E3 ubiquitin-protein ligase XBAT3...   186   2e-45
ref|XP_004143630.1| PREDICTED: E3 ubiquitin-protein ligase XBAT3...   174   4e-45
ref|XP_002510819.1| ankyrin repeat-containing protein, putative ...   175   4e-42

>ref|XP_003548210.1| PREDICTED: E3 ubiquitin-protein ligase XBAT33-like [Glycine max]
          Length = 511

 Score =  171 bits (434), Expect(2) = 4e-46
 Identities = 80/103 (77%), Positives = 91/103 (88%)
 Frame = -1

Query: 392 LLDIQANVSAVTFHYGTSTDLIGAANTPLHYAACGGNLKCCQMLLARGASRRTLNCNGWL 213
           LLD+ ANVSA TFHYGTS DLIGA +TPLHYAACGGNLKCCQ+LLARGASR  LNCNGWL
Sbjct: 196 LLDLNANVSAATFHYGTSMDLIGAGSTPLHYAACGGNLKCCQILLARGASRMALNCNGWL 255

Query: 212 PIDVARI*GRHWLEPLLSPSSNSDIPTFAPSNCLSLPLVSVLN 84
           P+DVAR+ GRHWLEPLL+P+S++ I +F  SN LSLPL+SVLN
Sbjct: 256 PLDVARMWGRHWLEPLLTPTSDATISSFPSSNYLSLPLMSVLN 298



 Score = 38.5 bits (88), Expect(2) = 4e-46
 Identities = 19/28 (67%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
 Frame = -2

Query: 88  LINIARECGLQS-FTSCDESDVCVVCRE 8
           ++NIARECGLQS  TS +E DVC VC E
Sbjct: 296 VLNIARECGLQSTTTSSNEVDVCAVCLE 323


>ref|XP_003534009.1| PREDICTED: E3 ubiquitin-protein ligase XBAT33-like [Glycine max]
          Length = 511

 Score =  171 bits (434), Expect(2) = 1e-45
 Identities = 80/103 (77%), Positives = 91/103 (88%)
 Frame = -1

Query: 392 LLDIQANVSAVTFHYGTSTDLIGAANTPLHYAACGGNLKCCQMLLARGASRRTLNCNGWL 213
           LLD+ ANVSA TFHYGTS DLIGA +TPLHYAACGGNLKCCQ+LLARGASR  LNCNGWL
Sbjct: 196 LLDLSANVSAATFHYGTSMDLIGAGSTPLHYAACGGNLKCCQILLARGASRMALNCNGWL 255

Query: 212 PIDVARI*GRHWLEPLLSPSSNSDIPTFAPSNCLSLPLVSVLN 84
           P+DVAR+ GRHWLEPLL+P+S++ I +F  SN LSLPL+SVLN
Sbjct: 256 PLDVARMWGRHWLEPLLTPTSDATISSFPSSNYLSLPLMSVLN 298



 Score = 37.0 bits (84), Expect(2) = 1e-45
 Identities = 18/28 (64%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = -2

Query: 88  LINIARECGLQS-FTSCDESDVCVVCRE 8
           ++NIARECGLQS  TS +E D C VC E
Sbjct: 296 VLNIARECGLQSTTTSSNEVDACAVCLE 323


>ref|XP_002278915.1| PREDICTED: E3 ubiquitin-protein ligase XBAT33 [Vitis vinifera]
           gi|297741088|emb|CBI31819.3| unnamed protein product
           [Vitis vinifera]
          Length = 512

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/103 (84%), Positives = 95/103 (92%)
 Frame = -1

Query: 392 LLDIQANVSAVTFHYGTSTDLIGAANTPLHYAACGGNLKCCQMLLARGASRRTLNCNGWL 213
           LLDI ANVSAVTFHYGTS DLIGA +TPLHYAACGGNLKCCQ+LLARGASR TLNCNGWL
Sbjct: 197 LLDIHANVSAVTFHYGTSMDLIGAGSTPLHYAACGGNLKCCQILLARGASRLTLNCNGWL 256

Query: 212 PIDVARI*GRHWLEPLLSPSSNSDIPTFAPSNCLSLPLVSVLN 84
           P+DVAR+ GRHWLEPLL+P+S+S IP F PSNCLSLPL+SVLN
Sbjct: 257 PLDVARMWGRHWLEPLLAPNSDSIIPVFPPSNCLSLPLMSVLN 299


>ref|XP_004143630.1| PREDICTED: E3 ubiquitin-protein ligase XBAT33-like [Cucumis
           sativus] gi|449506474|ref|XP_004162759.1| PREDICTED: E3
           ubiquitin-protein ligase XBAT33-like [Cucumis sativus]
          Length = 512

 Score =  174 bits (440), Expect(2) = 4e-45
 Identities = 82/103 (79%), Positives = 91/103 (88%)
 Frame = -1

Query: 392 LLDIQANVSAVTFHYGTSTDLIGAANTPLHYAACGGNLKCCQMLLARGASRRTLNCNGWL 213
           LLD+ ANVSAVTFHYGTS DLIGA +TPLHYAACGGNLKCCQ+LLARGASR TLNCNGWL
Sbjct: 197 LLDLHANVSAVTFHYGTSMDLIGAGSTPLHYAACGGNLKCCQILLARGASRMTLNCNGWL 256

Query: 212 PIDVARI*GRHWLEPLLSPSSNSDIPTFAPSNCLSLPLVSVLN 84
           P+DVAR+ GRHWLEPLL P+S+S +P F  SN LSLPL+S LN
Sbjct: 257 PLDVARMWGRHWLEPLLVPNSDSILPRFPTSNHLSLPLLSALN 299



 Score = 32.7 bits (73), Expect(2) = 4e-45
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -2

Query: 85  INIARECGLQSF-TSCDESDVCVVCRE 8
           +NIARECG +S   + D+ D C VC E
Sbjct: 298 LNIARECGFKSMGATSDDGDTCAVCLE 324


>ref|XP_002510819.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223549934|gb|EEF51421.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 513

 Score =  175 bits (443), Expect = 4e-42
 Identities = 82/103 (79%), Positives = 92/103 (89%)
 Frame = -1

Query: 392 LLDIQANVSAVTFHYGTSTDLIGAANTPLHYAACGGNLKCCQMLLARGASRRTLNCNGWL 213
           LLDI ANVSAVTFHYGT+ DLIGA +TPLHYAACGGNLKCCQ+L+ARGASR TLNCNGWL
Sbjct: 197 LLDIHANVSAVTFHYGTTMDLIGAGSTPLHYAACGGNLKCCQILIARGASRMTLNCNGWL 256

Query: 212 PIDVARI*GRHWLEPLLSPSSNSDIPTFAPSNCLSLPLVSVLN 84
           P+DVAR+ GRHWLEPLL+P S+S +P F  SN LSLPL+SVLN
Sbjct: 257 PVDVARMWGRHWLEPLLAPYSDSVVPRFPHSNFLSLPLLSVLN 299


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