BLASTX nr result

ID: Coptis21_contig00028142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028142
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_002517413.1| amino acid permease, putative [Ricinus commu...   121   5e-26
gb|AFK43271.1| unknown [Lotus japonicus]                              120   1e-25
ref|XP_003554136.1| PREDICTED: probable peptide/nitrate transpor...   120   2e-25

>ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|222874578|gb|EEF11709.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  130 bits (326), Expect = 1e-28
 Identities = 67/89 (75%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   VTQRMGIGMFLSVIAMIFAAVVETKRLEISRRTEVVLLPAGT-VPLSIFWLLPQYILLGF 179
           VTQRMGIGM LS+IAM+ AA+VETKRLEISR+ EV+     T VPLSIFWLLPQYILLG 
Sbjct: 375 VTQRMGIGMVLSIIAMVIAALVETKRLEISRKMEVLDPKLETEVPLSIFWLLPQYILLGI 434

Query: 180 SDVFTVVGMQEFFYTEAPSRMKTMGMALH 266
           SD+FTVVGMQEFFY+E P RM+TMG+AL+
Sbjct: 435 SDIFTVVGMQEFFYSEVPVRMRTMGIALY 463


>ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|222847991|gb|EEE85538.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  125 bits (315), Expect = 3e-27
 Identities = 65/89 (73%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   VTQRMGIGMFLSVIAMIFAAVVETKRLEISRRTEVVLLPAGT-VPLSIFWLLPQYILLGF 179
           VT+RMGIGM LS+IAM  AA+VETKRLEI ++ EVV     T VPLSIFWLLPQYILLG 
Sbjct: 375 VTERMGIGMVLSIIAMAIAALVETKRLEIGQKMEVVDQKMETEVPLSIFWLLPQYILLGI 434

Query: 180 SDVFTVVGMQEFFYTEAPSRMKTMGMALH 266
           SD+FTVVGMQEFFY+E P RM+TMG+AL+
Sbjct: 435 SDIFTVVGMQEFFYSEVPVRMRTMGIALY 463


>ref|XP_002517413.1| amino acid permease, putative [Ricinus communis]
           gi|223543424|gb|EEF44955.1| amino acid permease,
           putative [Ricinus communis]
          Length = 536

 Score =  121 bits (304), Expect = 5e-26
 Identities = 64/88 (72%), Positives = 71/88 (80%)
 Frame = +3

Query: 3   VTQRMGIGMFLSVIAMIFAAVVETKRLEISRRTEVVLLPAGTVPLSIFWLLPQYILLGFS 182
           V QRMGIGM LS+IAMI AAVVE KR+ ISR     +  + TVPLSIFWLLPQYILLG S
Sbjct: 376 VMQRMGIGMVLSIIAMIIAAVVERKRIMISRE----MPHSETVPLSIFWLLPQYILLGIS 431

Query: 183 DVFTVVGMQEFFYTEAPSRMKTMGMALH 266
           D+FTVVGMQEFFY E P RMKTMG+AL+
Sbjct: 432 DIFTVVGMQEFFYNEVPVRMKTMGIALY 459


>gb|AFK43271.1| unknown [Lotus japonicus]
          Length = 371

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/88 (67%), Positives = 70/88 (79%)
 Frame = +3

Query: 3   VTQRMGIGMFLSVIAMIFAAVVETKRLEISRRTEVVLLPAGTVPLSIFWLLPQYILLGFS 182
           V QRMGIGM LS+IAM+ AA+VE +RL+I R   +  L + TVPLSIFWLLPQYILLG S
Sbjct: 209 VMQRMGIGMVLSIIAMVIAALVEMRRLDIGREMRIAGLQSETVPLSIFWLLPQYILLGIS 268

Query: 183 DVFTVVGMQEFFYTEAPSRMKTMGMALH 266
           D+ TVVGMQEFFY E P  M+TMG+AL+
Sbjct: 269 DISTVVGMQEFFYGEVPKTMRTMGIALY 296


>ref|XP_003554136.1| PREDICTED: probable peptide/nitrate transporter At5g14940-like
           [Glycine max]
          Length = 540

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/88 (68%), Positives = 70/88 (79%)
 Frame = +3

Query: 3   VTQRMGIGMFLSVIAMIFAAVVETKRLEISRRTEVVLLPAGTVPLSIFWLLPQYILLGFS 182
           V QRMGIGM LS+IAMI AA+VE +RL+I R+       + TVPLSIFWLLPQYILLG S
Sbjct: 378 VMQRMGIGMVLSIIAMIIAALVEMRRLDIGRQMRSAGSQSETVPLSIFWLLPQYILLGIS 437

Query: 183 DVFTVVGMQEFFYTEAPSRMKTMGMALH 266
           D+FTVVGMQEFFY E P  M+TMG+AL+
Sbjct: 438 DIFTVVGMQEFFYGEVPRNMRTMGIALY 465


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