BLASTX nr result

ID: Coptis21_contig00028134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028134
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic su...   125   3e-27
emb|CBI30712.3| unnamed protein product [Vitis vinifera]              124   1e-26
gb|AEN70835.1| cellulose synthase [Gossypium armourianum] gi|345...   120   9e-26
gb|AEN70822.1| cellulose synthase [Gossypium turneri]                 120   9e-26
gb|AFZ78566.1| cellulose synthase [Populus tomentosa]                 120   1e-25

>ref|XP_002269610.2| PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming]
           [Vitis vinifera]
          Length = 1360

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/93 (61%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
 Frame = -1

Query: 278 KMMSSGVPLCNSCGETVGFASNGEAFVACHECNFPLCKTCLDYEVKEGKTGCLRCGAPFP 99
           KMM SGVP C +CGE VGF SNGE FVACHECNFP+CK+CLDYE+KEG+  CLRC  P+ 
Sbjct: 377 KMMQSGVPPCTTCGEPVGFDSNGEVFVACHECNFPVCKSCLDYEIKEGRKVCLRCSTPYD 436

Query: 98  ADTLENPSMEDVDM-EAGNRTTMASHLHDSQDV 3
               E+ +M DV+  ++ N +TMA+HL+D+QDV
Sbjct: 437 ----ESSTMADVETNQSSNHSTMAAHLNDAQDV 465


>emb|CBI30712.3| unnamed protein product [Vitis vinifera]
          Length = 983

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/92 (60%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
 Frame = -1

Query: 275 MMSSGVPLCNSCGETVGFASNGEAFVACHECNFPLCKTCLDYEVKEGKTGCLRCGAPFPA 96
           MM SGVP C +CGE VGF SNGE FVACHECNFP+CK+CLDYE+KEG+  CLRC  P+  
Sbjct: 1   MMQSGVPPCTTCGEPVGFDSNGEVFVACHECNFPVCKSCLDYEIKEGRKVCLRCSTPYD- 59

Query: 95  DTLENPSMEDVDM-EAGNRTTMASHLHDSQDV 3
              E+ +M DV+  ++ N +TMA+HL+D+QDV
Sbjct: 60  ---ESSTMADVETNQSSNHSTMAAHLNDAQDV 88


>gb|AEN70835.1| cellulose synthase [Gossypium armourianum]
           gi|345104029|gb|AEN70836.1| cellulose synthase
           [Gossypium harknessii]
          Length = 974

 Score =  120 bits (302), Expect = 9e-26
 Identities = 52/91 (57%), Positives = 69/91 (75%)
 Frame = -1

Query: 275 MMSSGVPLCNSCGETVGFASNGEAFVACHECNFPLCKTCLDYEVKEGKTGCLRCGAPFPA 96
           MM SGVP+C++CGE VG   NGE FVACHECNFP+CK+C +Y++KEG+  CLRCG+P+  
Sbjct: 1   MMESGVPVCHTCGEHVGLNVNGEPFVACHECNFPICKSCFEYDLKEGRKACLRCGSPYDE 60

Query: 95  DTLENPSMEDVDMEAGNRTTMASHLHDSQDV 3
           + L     +DV+   GN++TMA+HL  SQDV
Sbjct: 61  NLL-----DDVEKATGNQSTMAAHLSKSQDV 86


>gb|AEN70822.1| cellulose synthase [Gossypium turneri]
          Length = 974

 Score =  120 bits (302), Expect = 9e-26
 Identities = 52/91 (57%), Positives = 69/91 (75%)
 Frame = -1

Query: 275 MMSSGVPLCNSCGETVGFASNGEAFVACHECNFPLCKTCLDYEVKEGKTGCLRCGAPFPA 96
           MM SGVP+C++CGE VG   NGE FVACHECNFP+CK+C +Y++KEG+  CLRCG+P+  
Sbjct: 1   MMESGVPVCHTCGEHVGLNVNGEPFVACHECNFPICKSCFEYDLKEGRKACLRCGSPYDE 60

Query: 95  DTLENPSMEDVDMEAGNRTTMASHLHDSQDV 3
           + L     +DV+   GN++TMA+HL  SQDV
Sbjct: 61  NLL-----DDVEKATGNQSTMAAHLSKSQDV 86


>gb|AFZ78566.1| cellulose synthase [Populus tomentosa]
          Length = 978

 Score =  120 bits (301), Expect = 1e-25
 Identities = 50/91 (54%), Positives = 71/91 (78%)
 Frame = -1

Query: 275 MMSSGVPLCNSCGETVGFASNGEAFVACHECNFPLCKTCLDYEVKEGKTGCLRCGAPFPA 96
           MM SG P+C++CGE VG  +NGE F ACHECN+P+CK+C ++E+KEG+  CLRCG+P+  
Sbjct: 1   MMESGAPICHTCGEQVGHDANGELFAACHECNYPMCKSCFEFEIKEGRKVCLRCGSPYDE 60

Query: 95  DTLENPSMEDVDMEAGNRTTMASHLHDSQDV 3
           + L++   +    E+GN++TMASHL+DSQDV
Sbjct: 61  NLLDDVEKK----ESGNQSTMASHLNDSQDV 87


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