BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028113
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   103   1e-19
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   100   8e-19
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    99   2e-18
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    99   2e-18
gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi...    90   1e-15

>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  103 bits (256), Expect = 1e-19
 Identities = 101/315 (32%), Positives = 137/315 (43%), Gaps = 26/315 (8%)
 Frame = -1

Query: 1267 KLDMANAYNRIE*NFLLDIIC*LGFSFKWVSLIT*PLSQHCIYSILLSGNPPNWFKSSRG 1088
            KLDM+ AY+R+E +FL D+I  LGF   WV+LI   +S    Y I ++G     F   RG
Sbjct: 830  KLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVST-VTYRIRVNGELSESFSPGRG 888

Query: 1087 LRQRDPLSPY*FVIATEALSRLLAKAEEQ------NLCQEYL*KSTWAYPFTLC**SHKF 926
            LRQ DPLSPY F++  E  S LL+K EE+       +CQ          P      SH  
Sbjct: 889  LRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQ--------GAPSV----SHLL 936

Query: 925  LQN*DRRI---A*SS*SQHLLCLFWTKTKLRIY----------DKSTVSFSPNTHSIYQR 785
              + D  I   A    +Q L      +T L+IY          DKS V FSPNT S+ +R
Sbjct: 937  FAD-DSLILCRANGGEAQQL------QTILQIYEECSGQVINKDKSAVMFSPNTSSLEKR 989

Query: 784  LIRSFLNVKPMQANDKYFGSPILXXXXXXXXXXXXXXXXKYCYLES*GTIPSRK------ 623
             + + LN++    N++Y G P+                           + SR       
Sbjct: 990  AVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILI 1049

Query: 622  NSVAEASPIYFMATFYLPNHTLTKLDNTCRLFDGEVQMKP-QFHLTKWNIITEPKYSGGL 446
             +VA+A P + M  F L      ++      +    Q K  + H   WN +T PK  GGL
Sbjct: 1050 KAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGL 1109

Query: 445  DFRLNRDNN*AMFAK 401
             FR     N AM AK
Sbjct: 1110 GFRDIYIFNLAMLAK 1124


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  100 bits (249), Expect = 8e-19
 Identities = 100/315 (31%), Positives = 136/315 (43%), Gaps = 26/315 (8%)
 Frame = -1

Query: 1267 KLDMANAYNRIE*NFLLDIIC*LGFSFKWVSLIT*PLSQHCIYSILLSGNPPNWFKSSRG 1088
            KLDM+ AY+R+E +FL D++  LGF   WV+LI   +S    Y I ++G     F   RG
Sbjct: 803  KLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVST-VTYRIRVNGELSESFSPERG 861

Query: 1087 LRQRDPLSPY*FVIATEALSRLLAKAEEQ------NLCQEYL*KSTWAYPFTLC**SHKF 926
            LRQ DPLSPY F++  E  S LL+K EE+       +CQ          P      SH  
Sbjct: 862  LRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQ--------GAPSV----SHLL 909

Query: 925  LQN*DRRI---A*SS*SQHLLCLFWTKTKLRIY----------DKSTVSFSPNTHSIYQR 785
              + D  I   A    +Q L      +T L+IY          DKS V FSPNT S+ + 
Sbjct: 910  FAD-DSLILCRANGGEAQQL------QTILQIYEECSGQVINKDKSAVMFSPNTSSLEKG 962

Query: 784  LIRSFLNVKPMQANDKYFGSPILXXXXXXXXXXXXXXXXKYCYLES*GTIPSRK------ 623
             + + LN++    N+KY G P+                           + SR       
Sbjct: 963  AVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILI 1022

Query: 622  NSVAEASPIYFMATFYLPNHTLTKLDNTCRLFDGEVQMKP-QFHLTKWNIITEPKYSGGL 446
             +VA+A P + M  F L      ++      +    Q K  + H   WN +T PK  GGL
Sbjct: 1023 KAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGL 1082

Query: 445  DFRLNRDNN*AMFAK 401
             FR     N AM AK
Sbjct: 1083 GFRDIYIFNLAMLAK 1097


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 99/315 (31%), Positives = 135/315 (42%), Gaps = 26/315 (8%)
 Frame = -1

Query: 1267 KLDMANAYNRIE*NFLLDIIC*LGFSFKWVSLIT*PLSQHCIYSILLSGNPPNWFKSSRG 1088
            KLDM+ AY+R+E +FL D++  LGF   WV+LI   +S    Y I ++G     F   RG
Sbjct: 775  KLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVST-VTYRIRVNGELSESFSPERG 833

Query: 1087 LRQRDPLSPY*FVIATEALSRLLAKAEEQ------NLCQEYL*KSTWAYPFTLC**SHKF 926
            LRQ DPLSPY F++  E  S LL+K EE+       +CQ          P      SH  
Sbjct: 834  LRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQ--------GAPSV----SHLL 881

Query: 925  LQN*DRRI---A*SS*SQHLLCLFWTKTKLRIY----------DKSTVSFSPNTHSIYQR 785
              + D  I   A    +Q L      +T L+IY          DKS V FSPNT S+ + 
Sbjct: 882  FAD-DSLILCRANGGEAQQL------QTILQIYEECSGQVINKDKSAVMFSPNTSSLEKG 934

Query: 784  LIRSFLNVKPMQANDKYFGSPILXXXXXXXXXXXXXXXXKYCYLES*GTIPSRK------ 623
             + + LN++    N+KY G P+                           + SR       
Sbjct: 935  AVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILI 994

Query: 622  NSVAEASPIYFMATFYLPNHTLTKLDNTCRLFDGEVQMKP-QFHLTKWNIITEPKYSGGL 446
             +VA+  P + M  F L      ++      +    Q K  + H   WN +T PK  GGL
Sbjct: 995  KAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGL 1054

Query: 445  DFRLNRDNN*AMFAK 401
             FR     N AM AK
Sbjct: 1055 GFRDIYIFNLAMLAK 1069


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 99/315 (31%), Positives = 135/315 (42%), Gaps = 26/315 (8%)
 Frame = -1

Query: 1267 KLDMANAYNRIE*NFLLDIIC*LGFSFKWVSLIT*PLSQHCIYSILLSGNPPNWFKSSRG 1088
            KLDM+ AY+R+E +FL D++  LGF   WV+LI   +S    Y I ++G     F   RG
Sbjct: 771  KLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVST-VTYRIRVNGELSESFSPERG 829

Query: 1087 LRQRDPLSPY*FVIATEALSRLLAKAEEQ------NLCQEYL*KSTWAYPFTLC**SHKF 926
            LRQ DPLSPY F++  E  S LL+K EE+       +CQ          P      SH  
Sbjct: 830  LRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQ--------GAPSV----SHLL 877

Query: 925  LQN*DRRI---A*SS*SQHLLCLFWTKTKLRIY----------DKSTVSFSPNTHSIYQR 785
              + D  I   A    +Q L      +T L+IY          DKS V FSPNT S+ + 
Sbjct: 878  FAD-DSLILCRANGGEAQQL------QTILQIYEECSGQVINKDKSAVMFSPNTSSLEKG 930

Query: 784  LIRSFLNVKPMQANDKYFGSPILXXXXXXXXXXXXXXXXKYCYLES*GTIPSRK------ 623
             + + LN++    N+KY G P+                           + SR       
Sbjct: 931  AVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILI 990

Query: 622  NSVAEASPIYFMATFYLPNHTLTKLDNTCRLFDGEVQMKP-QFHLTKWNIITEPKYSGGL 446
             +VA+  P + M  F L      ++      +    Q K  + H   WN +T PK  GGL
Sbjct: 991  KAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGL 1050

Query: 445  DFRLNRDNN*AMFAK 401
             FR     N AM AK
Sbjct: 1051 GFRDIYIFNLAMLAK 1065


>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
            gi|222630794|gb|EEE62926.1| hypothetical protein
            OsJ_17731 [Oryza sativa Japonica Group]
          Length = 893

 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 9/299 (3%)
 Frame = -1

Query: 1270 LKLDMANAYNRIE*NFLLDIIC*LGFSFKWVSLIT*PLSQHCIYSILLSGNPPNWFKSSR 1091
            LKLDM+ AY+R+E +FL  ++  LGF+  WV LI   +S    Y I ++G+  +    SR
Sbjct: 248  LKLDMSKAYDRVEWSFLEKMMVRLGFAEGWVKLIMRCVST-VTYRIKVNGDLTDQIIPSR 306

Query: 1090 GLRQRDPLSPY*FVIATEALSRLLAKAEEQ-NLCQEYL*KSTWAYPFTLC**SHKFLQN* 914
            GLRQ DP+SPY F+I  E  S LL  AEE+ +L    + +   +    L       L   
Sbjct: 307  GLRQGDPISPYLFLICAEGFSSLLYAAEERGDLSGVKVCQQAPSVSHLLFADDSLLLFKV 366

Query: 913  DRRIA*SS*SQHLLCLFWT-KTKLRIYDKSTVSFSPNTHSIYQRLIRSFLNVKPMQANDK 737
            + R A     Q++L L+ +   ++   DKS++ FS NT    ++++   L++     N+K
Sbjct: 367  NERSA--QCLQNVLNLYESCSGQIVNKDKSSIMFSKNTSQADRKMVMEILDISTEARNEK 424

Query: 736  YFGSPILXXXXXXXXXXXXXXXXKYCYLES*GTIPSRK------NSVAEASPIYFMATFY 575
            Y G P+                           + S+        +VA+A P + M+ F 
Sbjct: 425  YLGLPVYMGRSRAKTFAYLKERVWKKIQGWKEKLLSKAGKDILIKAVAQAIPTFAMSCFD 484

Query: 574  LPNHTLTKLDN-TCRLFDGEVQMKPQFHLTKWNIITEPKYSGGLDFRLNRDNN*AMFAK 401
            L      ++    CR F  + + + + H   W+++   K  GGL +R     N AM A+
Sbjct: 485  LTKTLCDEISAIICRYFWSQQETENKMHWLSWDLLCRRKKKGGLGYRDLHLFNLAMLAR 543