BLASTX nr result
ID: Coptis21_contig00028109
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00028109 (337 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuc... 94 1e-17 ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotei... 94 1e-17 gb|ADN34103.1| hypothetical protein [Cucumis melo subsp. melo] 93 2e-17 ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycin... 93 3e-17 ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783... 92 3e-17 >ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein B''-like [Cucumis sativus] Length = 262 Score = 94.0 bits (232), Expect = 1e-17 Identities = 46/71 (64%), Positives = 51/71 (71%) Frame = +3 Query: 123 HPPYDPNYLLXXXXXXXXXXXXXNEQQNINTLFVSGIPDDIKPREIHNLFRRRLGFDFCQ 302 H PYDP YL +E+ NINTLF+SG+PDD+K REIHNLFRRR GFD CQ Sbjct: 3 HLPYDPYYLYNQPDPTY------SERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQ 56 Query: 303 LKYTGRGNQVV 335 LKYTGRGNQVV Sbjct: 57 LKYTGRGNQVV 67 >ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis sativus] Length = 262 Score = 94.0 bits (232), Expect = 1e-17 Identities = 46/71 (64%), Positives = 51/71 (71%) Frame = +3 Query: 123 HPPYDPNYLLXXXXXXXXXXXXXNEQQNINTLFVSGIPDDIKPREIHNLFRRRLGFDFCQ 302 H PYDP YL +E+ NINTLF+SG+PDD+K REIHNLFRRR GFD CQ Sbjct: 3 HLPYDPYYLYNQPDPTY------SERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQ 56 Query: 303 LKYTGRGNQVV 335 LKYTGRGNQVV Sbjct: 57 LKYTGRGNQVV 67 >gb|ADN34103.1| hypothetical protein [Cucumis melo subsp. melo] Length = 113 Score = 93.2 bits (230), Expect = 2e-17 Identities = 45/71 (63%), Positives = 51/71 (71%) Frame = +3 Query: 123 HPPYDPNYLLXXXXXXXXXXXXXNEQQNINTLFVSGIPDDIKPREIHNLFRRRLGFDFCQ 302 H PYDP YL +++ NINTLF+SG+PDD+K REIHNLFRRR GFD CQ Sbjct: 3 HHPYDPYYLYNQPDPTY------SDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQ 56 Query: 303 LKYTGRGNQVV 335 LKYTGRGNQVV Sbjct: 57 LKYTGRGNQVV 67 >ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycine max] gi|255636681|gb|ACU18677.1| unknown [Glycine max] Length = 265 Score = 92.8 bits (229), Expect = 3e-17 Identities = 46/71 (64%), Positives = 50/71 (70%) Frame = +3 Query: 123 HPPYDPNYLLXXXXXXXXXXXXXNEQQNINTLFVSGIPDDIKPREIHNLFRRRLGFDFCQ 302 HPP DP YL +E+ NINTLFVSG+PDD+K REIHNLFRRR GFD CQ Sbjct: 3 HPPLDPYYLYQQQ----------DERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQ 52 Query: 303 LKYTGRGNQVV 335 LKYTGR NQVV Sbjct: 53 LKYTGRANQVV 63 >ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783764 [Glycine max] Length = 264 Score = 92.4 bits (228), Expect = 3e-17 Identities = 46/70 (65%), Positives = 50/70 (71%) Frame = +3 Query: 126 PPYDPNYLLXXXXXXXXXXXXXNEQQNINTLFVSGIPDDIKPREIHNLFRRRLGFDFCQL 305 PP+DP YL +EQ NINTLFVSG+PDD+K REIHNLFRRR GFD CQL Sbjct: 4 PPFDPFYLYQH-----------DEQSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL 52 Query: 306 KYTGRGNQVV 335 KYTGR NQVV Sbjct: 53 KYTGRANQVV 62