BLASTX nr result

ID: Coptis21_contig00028109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028109
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuc...    94   1e-17
ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotei...    94   1e-17
gb|ADN34103.1| hypothetical protein [Cucumis melo subsp. melo]         93   2e-17
ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycin...    93   3e-17
ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783...    92   3e-17

>ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
           B''-like [Cucumis sativus]
          Length = 262

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/71 (64%), Positives = 51/71 (71%)
 Frame = +3

Query: 123 HPPYDPNYLLXXXXXXXXXXXXXNEQQNINTLFVSGIPDDIKPREIHNLFRRRLGFDFCQ 302
           H PYDP YL              +E+ NINTLF+SG+PDD+K REIHNLFRRR GFD CQ
Sbjct: 3   HLPYDPYYLYNQPDPTY------SERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQ 56

Query: 303 LKYTGRGNQVV 335
           LKYTGRGNQVV
Sbjct: 57  LKYTGRGNQVV 67


>ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
           sativus]
          Length = 262

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/71 (64%), Positives = 51/71 (71%)
 Frame = +3

Query: 123 HPPYDPNYLLXXXXXXXXXXXXXNEQQNINTLFVSGIPDDIKPREIHNLFRRRLGFDFCQ 302
           H PYDP YL              +E+ NINTLF+SG+PDD+K REIHNLFRRR GFD CQ
Sbjct: 3   HLPYDPYYLYNQPDPTY------SERSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQ 56

Query: 303 LKYTGRGNQVV 335
           LKYTGRGNQVV
Sbjct: 57  LKYTGRGNQVV 67


>gb|ADN34103.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 113

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/71 (63%), Positives = 51/71 (71%)
 Frame = +3

Query: 123 HPPYDPNYLLXXXXXXXXXXXXXNEQQNINTLFVSGIPDDIKPREIHNLFRRRLGFDFCQ 302
           H PYDP YL              +++ NINTLF+SG+PDD+K REIHNLFRRR GFD CQ
Sbjct: 3   HHPYDPYYLYNQPDPTY------SDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQ 56

Query: 303 LKYTGRGNQVV 335
           LKYTGRGNQVV
Sbjct: 57  LKYTGRGNQVV 67


>ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycine max]
           gi|255636681|gb|ACU18677.1| unknown [Glycine max]
          Length = 265

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/71 (64%), Positives = 50/71 (70%)
 Frame = +3

Query: 123 HPPYDPNYLLXXXXXXXXXXXXXNEQQNINTLFVSGIPDDIKPREIHNLFRRRLGFDFCQ 302
           HPP DP YL              +E+ NINTLFVSG+PDD+K REIHNLFRRR GFD CQ
Sbjct: 3   HPPLDPYYLYQQQ----------DERSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQ 52

Query: 303 LKYTGRGNQVV 335
           LKYTGR NQVV
Sbjct: 53  LKYTGRANQVV 63


>ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783764 [Glycine max]
          Length = 264

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/70 (65%), Positives = 50/70 (71%)
 Frame = +3

Query: 126 PPYDPNYLLXXXXXXXXXXXXXNEQQNINTLFVSGIPDDIKPREIHNLFRRRLGFDFCQL 305
           PP+DP YL              +EQ NINTLFVSG+PDD+K REIHNLFRRR GFD CQL
Sbjct: 4   PPFDPFYLYQH-----------DEQSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL 52

Query: 306 KYTGRGNQVV 335
           KYTGR NQVV
Sbjct: 53  KYTGRANQVV 62


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