BLASTX nr result

ID: Coptis21_contig00028106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028106
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277177.2| PREDICTED: LOW QUALITY PROTEIN: endoglucanas...   337   7e-91
emb|CBI27137.3| unnamed protein product [Vitis vinifera]              337   7e-91
gb|AFK45497.1| unknown [Lotus japonicus]                              324   8e-87
ref|XP_002527135.1| endo-1,4-beta-glucanase, putative [Ricinus c...   321   6e-86
ref|XP_002310080.1| glycosyl hydrolase family 9 [Populus trichoc...   317   7e-85

>ref|XP_002277177.2| PREDICTED: LOW QUALITY PROTEIN: endoglucanase 5-like [Vitis
           vinifera]
          Length = 611

 Score =  337 bits (865), Expect = 7e-91
 Identities = 157/194 (80%), Positives = 175/194 (90%)
 Frame = -2

Query: 582 SIPSAQQFYASTSGYSDELLWAAAWLYRATGEEYYLQYVVDNAVSLGGTGWAVREFSWDN 403
           SI  A+Q+Y S SGYSDELLWAAAWL+RATG+EYYL+YVVDNAVS+GGTGWAV+EFSWDN
Sbjct: 223 SIQCARQYYTS-SGYSDELLWAAAWLFRATGDEYYLKYVVDNAVSMGGTGWAVKEFSWDN 281

Query: 402 KYAGVQILLAKVLMEGNGGPYTSTLKQYQAKADYFVCACLQKNNGYNVPMTPGGLLYFHE 223
           KYAGVQILL+KVLMEG GG Y STLK+YQAKAD+F CACLQKN+GYNVP+TPGGL+Y HE
Sbjct: 282 KYAGVQILLSKVLMEGRGGAYASTLKKYQAKADFFACACLQKNDGYNVPLTPGGLVYLHE 341

Query: 222 WNNLQYVSSAAFLLTVYSDYLSTGNTEVKCPDAQVKPQDLLNFAQSQADYILGKNPKSMS 43
           WNN+QY SSAAFLL VYSDYLS  N  +KCPDAQV+P +LLNFA+SQADYILGKNPKSMS
Sbjct: 342 WNNMQYASSAAFLLAVYSDYLSAENAVLKCPDAQVQPYELLNFAKSQADYILGKNPKSMS 401

Query: 42  YLVGYGANYPVHVH 1
           YLVGYG  YPVH H
Sbjct: 402 YLVGYGQKYPVHAH 415


>emb|CBI27137.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  337 bits (865), Expect = 7e-91
 Identities = 157/194 (80%), Positives = 175/194 (90%)
 Frame = -2

Query: 582 SIPSAQQFYASTSGYSDELLWAAAWLYRATGEEYYLQYVVDNAVSLGGTGWAVREFSWDN 403
           SI  A+Q+Y S SGYSDELLWAAAWL+RATG+EYYL+YVVDNAVS+GGTGWAV+EFSWDN
Sbjct: 223 SIQCARQYYTS-SGYSDELLWAAAWLFRATGDEYYLKYVVDNAVSMGGTGWAVKEFSWDN 281

Query: 402 KYAGVQILLAKVLMEGNGGPYTSTLKQYQAKADYFVCACLQKNNGYNVPMTPGGLLYFHE 223
           KYAGVQILL+KVLMEG GG Y STLK+YQAKAD+F CACLQKN+GYNVP+TPGGL+Y HE
Sbjct: 282 KYAGVQILLSKVLMEGRGGAYASTLKKYQAKADFFACACLQKNDGYNVPLTPGGLVYLHE 341

Query: 222 WNNLQYVSSAAFLLTVYSDYLSTGNTEVKCPDAQVKPQDLLNFAQSQADYILGKNPKSMS 43
           WNN+QY SSAAFLL VYSDYLS  N  +KCPDAQV+P +LLNFA+SQADYILGKNPKSMS
Sbjct: 342 WNNMQYASSAAFLLAVYSDYLSAENAVLKCPDAQVQPYELLNFAKSQADYILGKNPKSMS 401

Query: 42  YLVGYGANYPVHVH 1
           YLVGYG  YPVH H
Sbjct: 402 YLVGYGQKYPVHAH 415


>gb|AFK45497.1| unknown [Lotus japonicus]
          Length = 644

 Score =  324 bits (830), Expect = 8e-87
 Identities = 150/194 (77%), Positives = 171/194 (88%)
 Frame = -2

Query: 582 SIPSAQQFYASTSGYSDELLWAAAWLYRATGEEYYLQYVVDNAVSLGGTGWAVREFSWDN 403
           SIPSAQQFYAS SGYSDEL WAAAWLY+ATG+EYYL+YVVDNAV +GGTGWAV+EFSWDN
Sbjct: 237 SIPSAQQFYAS-SGYSDELSWAAAWLYQATGDEYYLKYVVDNAVYMGGTGWAVKEFSWDN 295

Query: 402 KYAGVQILLAKVLMEGNGGPYTSTLKQYQAKADYFVCACLQKNNGYNVPMTPGGLLYFHE 223
           KYAGVQILL+KVL+EG  G Y STLKQYQAKADYF CA LQKN GYNV  TPGGL+Y H+
Sbjct: 296 KYAGVQILLSKVLLEGKAGSYVSTLKQYQAKADYFACAYLQKNEGYNVQKTPGGLVYVHD 355

Query: 222 WNNLQYVSSAAFLLTVYSDYLSTGNTEVKCPDAQVKPQDLLNFAQSQADYILGKNPKSMS 43
           WNNLQY SSAAFLL VYS+YL+   +++ CP+ Q++PQ+LL+FA+SQADYILGKNPK MS
Sbjct: 356 WNNLQYASSAAFLLAVYSNYLNAAKSQLNCPEGQIQPQELLSFAKSQADYILGKNPKEMS 415

Query: 42  YLVGYGANYPVHVH 1
           YL+GYG NYP HVH
Sbjct: 416 YLIGYGPNYPSHVH 429


>ref|XP_002527135.1| endo-1,4-beta-glucanase, putative [Ricinus communis]
           gi|223533495|gb|EEF35237.1| endo-1,4-beta-glucanase,
           putative [Ricinus communis]
          Length = 620

 Score =  321 bits (822), Expect = 6e-86
 Identities = 146/194 (75%), Positives = 171/194 (88%)
 Frame = -2

Query: 582 SIPSAQQFYASTSGYSDELLWAAAWLYRATGEEYYLQYVVDNAVSLGGTGWAVREFSWDN 403
           SI +A++FY S SGYSDELLWAAAWLYRAT +EYYL+Y VDNAV +GGTGWAV+EFSWDN
Sbjct: 222 SIKNAKEFYTS-SGYSDELLWAAAWLYRATDDEYYLKYAVDNAVYMGGTGWAVKEFSWDN 280

Query: 402 KYAGVQILLAKVLMEGNGGPYTSTLKQYQAKADYFVCACLQKNNGYNVPMTPGGLLYFHE 223
           KYAGVQILL+K+L+EG GG YTSTLKQY AKADYF CACL+KN+GYN+ MTPGGL+Y  E
Sbjct: 281 KYAGVQILLSKILLEGRGGTYTSTLKQYHAKADYFACACLRKNDGYNIQMTPGGLMYVRE 340

Query: 222 WNNLQYVSSAAFLLTVYSDYLSTGNTEVKCPDAQVKPQDLLNFAQSQADYILGKNPKSMS 43
           WNNLQY S+AAFLL VYSDYLS  + ++ CP+  ++PQ+L+NFAQSQADYILGKNPKSMS
Sbjct: 341 WNNLQYASAAAFLLAVYSDYLSYAHAKLSCPEGLIQPQELVNFAQSQADYILGKNPKSMS 400

Query: 42  YLVGYGANYPVHVH 1
           Y+VGYG  YP+HVH
Sbjct: 401 YIVGYGPQYPLHVH 414


>ref|XP_002310080.1| glycosyl hydrolase family 9 [Populus trichocarpa]
           gi|222852983|gb|EEE90530.1| glycosyl hydrolase family 9
           [Populus trichocarpa] gi|347466591|gb|AEO97208.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|347466645|gb|AEO97235.1| endo-1,4-beta-glucanase
           [Populus trichocarpa]
          Length = 611

 Score =  317 bits (813), Expect = 7e-85
 Identities = 147/194 (75%), Positives = 169/194 (87%)
 Frame = -2

Query: 582 SIPSAQQFYASTSGYSDELLWAAAWLYRATGEEYYLQYVVDNAVSLGGTGWAVREFSWDN 403
           SI +A+QFY S SGYSDELLWAAAWLYRAT +EY+L+YVVDNAV +GGTGWAV+EFSWDN
Sbjct: 221 SIQNAKQFYTS-SGYSDELLWAAAWLYRATDDEYFLKYVVDNAVYMGGTGWAVKEFSWDN 279

Query: 402 KYAGVQILLAKVLMEGNGGPYTSTLKQYQAKADYFVCACLQKNNGYNVPMTPGGLLYFHE 223
           KYAGVQILL+++L+EG GG YTSTLKQYQAKA+YF CACLQKN+GYN+  TPGGL+Y  E
Sbjct: 280 KYAGVQILLSQILLEGRGGAYTSTLKQYQAKANYFACACLQKNDGYNIHKTPGGLMYVRE 339

Query: 222 WNNLQYVSSAAFLLTVYSDYLSTGNTEVKCPDAQVKPQDLLNFAQSQADYILGKNPKSMS 43
           WNNLQY SSAAFLL VYSD LS  N ++ CP+ Q+ PQ LL+FA+SQADY LGKNPKSMS
Sbjct: 340 WNNLQYASSAAFLLAVYSDSLSAANAKLTCPEGQIPPQALLDFARSQADYFLGKNPKSMS 399

Query: 42  YLVGYGANYPVHVH 1
           YLVGYG  YP+HVH
Sbjct: 400 YLVGYGQQYPIHVH 413


Top