BLASTX nr result
ID: Coptis21_contig00028098
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00028098
(437 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250... 193 1e-47
emb|CBI31979.3| unnamed protein product [Vitis vinifera] 193 1e-47
ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinu... 189 2e-46
ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 188 3e-46
ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 188 3e-46
>ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
Length = 1047
Score = 193 bits (491), Expect = 1e-47
Identities = 91/126 (72%), Positives = 104/126 (82%)
Frame = +1
Query: 58 HEDFDALGDVFIWXXXXXXXXXXXXMHRVGTSSASKVDALLPKALRSTVVLDVQNIACGV 237
H+DFDALGDVF+W +HRVG+SS++K+DALLPKAL STVVLDV +IACG
Sbjct: 242 HDDFDALGDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGG 301
Query: 238 RHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGEYHTCAVTL 417
+HAVLVTK+GE+FSWGEE G RLGHGVE DV PKLID L GMN+ELVACGEYH+CAVTL
Sbjct: 302 KHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTL 361
Query: 418 SGDLYT 435
SGDLYT
Sbjct: 362 SGDLYT 367
Score = 59.7 bits (143), Expect = 2e-07
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = +1
Query: 208 LDVQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVAC 387
+ V +ACG H +VT G++F++G+ + G LGHG + + P+ ++ L G VAC
Sbjct: 399 MHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVAC 458
Query: 388 GEYHTCAV 411
G +HT AV
Sbjct: 459 GVWHTAAV 466
Score = 56.6 bits (135), Expect = 2e-06
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +1
Query: 214 VQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGE 393
V+ +ACG H ++T + E+++WG+ + G+LGHG P L+D L V+ V CG
Sbjct: 572 VEEVACGSYHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGL 631
Query: 394 YHTCAVTL 417
T A++L
Sbjct: 632 NFTAAISL 639
>emb|CBI31979.3| unnamed protein product [Vitis vinifera]
Length = 429
Score = 193 bits (491), Expect = 1e-47
Identities = 91/126 (72%), Positives = 104/126 (82%)
Frame = +1
Query: 58 HEDFDALGDVFIWXXXXXXXXXXXXMHRVGTSSASKVDALLPKALRSTVVLDVQNIACGV 237
H+DFDALGDVF+W +HRVG+SS++K+DALLPKAL STVVLDV +IACG
Sbjct: 242 HDDFDALGDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGG 301
Query: 238 RHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGEYHTCAVTL 417
+HAVLVTK+GE+FSWGEE G RLGHGVE DV PKLID L GMN+ELVACGEYH+CAVTL
Sbjct: 302 KHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTL 361
Query: 418 SGDLYT 435
SGDLYT
Sbjct: 362 SGDLYT 367
>ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223533605|gb|EEF35343.1| Ran GTPase binding protein,
putative [Ricinus communis]
Length = 1100
Score = 189 bits (480), Expect = 2e-46
Identities = 90/126 (71%), Positives = 101/126 (80%)
Frame = +1
Query: 58 HEDFDALGDVFIWXXXXXXXXXXXXMHRVGTSSASKVDALLPKALRSTVVLDVQNIACGV 237
H+D DALGDVFIW HR G+ K+D+LLPKAL STVVLDVQNIACG
Sbjct: 254 HDDSDALGDVFIWGEGTGDGVLGGGAHRAGSGFGVKLDSLLPKALESTVVLDVQNIACGG 313
Query: 238 RHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGEYHTCAVTL 417
RHA LVTKQGE+FSWGEESGGRLGHGV++DV PKLID+L+ +N+ELVACGEYHTCAVTL
Sbjct: 314 RHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTL 373
Query: 418 SGDLYT 435
SGDLYT
Sbjct: 374 SGDLYT 379
Score = 62.0 bits (149), Expect = 5e-08
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = +1
Query: 214 VQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGE 393
V+ IACG H ++T + E+++WG+ + GRLGHG D P L++ L V+ +ACG
Sbjct: 581 VEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACGT 640
Query: 394 YHTCAVTL 417
T A+ L
Sbjct: 641 NFTAAICL 648
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 160 SKVDALLPKALRSTVV-LDVQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQ 336
++V +PK + + + V +I+CG H +VT G++F++G+ + G LGHG V
Sbjct: 394 NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSI 453
Query: 337 PKLIDTLTGMNVELVACGEYHTCAV 411
P+ +++L G+ ACG +HT AV
Sbjct: 454 PREVESLKGLRTVRAACGVWHTAAV 478
Score = 55.1 bits (131), Expect = 6e-06
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Frame = +1
Query: 178 LPKALRSTVVLDVQNIACGVRHAVLVTK------------QGEIFSWGEESGGRLGHGVE 321
+P+ + S L ACGV H V + G++F+WG+ GRLGHG +
Sbjct: 453 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 512
Query: 322 ADVCQPKLIDTLTGMNVELVACGEYHTCAVTLSGDLYT 435
P + L N VACG T A+T SG +YT
Sbjct: 513 EAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYT 550
>ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
sativus]
Length = 806
Score = 188 bits (478), Expect = 3e-46
Identities = 94/127 (74%), Positives = 104/127 (81%), Gaps = 2/127 (1%)
Frame = +1
Query: 61 EDFDALGDVFIWXXXXXXXXXXXXMHRVGTSSA--SKVDALLPKALRSTVVLDVQNIACG 234
EDFDALGDV+IW +++VG+ + SK+DALLPKAL STVVLDV IACG
Sbjct: 239 EDFDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACG 298
Query: 235 VRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGEYHTCAVT 414
RHAVLVT+QGEIFSWGEESGGRLGHGVEADV PK+IDTL+G NVELVACGEYHTCAVT
Sbjct: 299 GRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVT 358
Query: 415 LSGDLYT 435
LSGDLYT
Sbjct: 359 LSGDLYT 365
Score = 59.3 bits (142), Expect = 3e-07
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Frame = +1
Query: 79 GDVFIWXXXXXXXXXXXXMHRVGT-SSASKVDALLPKALRSTVV-LDVQNIACGVRHAVL 252
GD++ W H G S+V +P+ + + + V I+CG H +
Sbjct: 361 GDLYTWGDGT---------HNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAV 411
Query: 253 VTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGEYHTCA 408
VT G++F++G+ S G LGHG P+ ++TL G+ VACG +HT A
Sbjct: 412 VTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAA 463
Score = 55.8 bits (133), Expect = 3e-06
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +1
Query: 145 GTSSASKVDALLPKALRSTVVLD-VQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVE 321
G ++ + LP + + V+ +ACG H ++T + E+++WG+ G+LGHG
Sbjct: 546 GQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDN 605
Query: 322 ADVCQPKLIDTLTGMNVELVACGEYHTCAVTL 417
P ++D L V+ VACG T + +
Sbjct: 606 NHRNTPTIVDVLKDKQVKNVACGSKFTVVICI 637
>ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222790 [Cucumis sativus]
Length = 982
Score = 188 bits (478), Expect = 3e-46
Identities = 94/127 (74%), Positives = 104/127 (81%), Gaps = 2/127 (1%)
Frame = +1
Query: 61 EDFDALGDVFIWXXXXXXXXXXXXMHRVGTSSA--SKVDALLPKALRSTVVLDVQNIACG 234
EDFDALGDV+IW +++VG+ + SK+DALLPKAL STVVLDV IACG
Sbjct: 239 EDFDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACG 298
Query: 235 VRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGEYHTCAVT 414
RHAVLVT+QGEIFSWGEESGGRLGHGVEADV PK+IDTL+G NVELVACGEYHTCAVT
Sbjct: 299 GRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVT 358
Query: 415 LSGDLYT 435
LSGDLYT
Sbjct: 359 LSGDLYT 365
Score = 58.9 bits (141), Expect = 4e-07
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +1
Query: 214 VQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVEADVCQPKLIDTLTGMNVELVACGE 393
V I+CG H +VT G++F++G+ S G LGHG P+ ++TL G+ VACG
Sbjct: 399 VSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGV 458
Query: 394 YHTCA 408
+HT A
Sbjct: 459 WHTAA 463
Score = 55.8 bits (133), Expect = 3e-06
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +1
Query: 145 GTSSASKVDALLPKALRSTVVLD-VQNIACGVRHAVLVTKQGEIFSWGEESGGRLGHGVE 321
G ++ + LP + + V+ +ACG H ++T + E+++WG+ G+LGHG
Sbjct: 546 GQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDN 605
Query: 322 ADVCQPKLIDTLTGMNVELVACGEYHTCAVTL 417
P ++D L V+ VACG T + +
Sbjct: 606 NHRNTPTIVDVLKDKQVKNVACGSKFTVVICI 637