BLASTX nr result

ID: Coptis21_contig00028074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028074
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534299.1| hypothetical protein RCOM_0132760 [Ricinus c...   194   6e-48
ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Viti...   189   2e-46
gb|AFW86296.1| hypothetical protein ZEAMMB73_105589 [Zea mays]        187   1e-45
gb|AFW86295.1| hypothetical protein ZEAMMB73_105589 [Zea mays]        187   1e-45
emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]   186   2e-45

>ref|XP_002534299.1| hypothetical protein RCOM_0132760 [Ricinus communis]
           gi|223525548|gb|EEF28085.1| hypothetical protein
           RCOM_0132760 [Ricinus communis]
          Length = 266

 Score =  194 bits (493), Expect = 6e-48
 Identities = 91/126 (72%), Positives = 111/126 (88%)
 Frame = -1

Query: 378 NDLLEKVLPATVSDYVELVKTHLVAGPNYRFTSRQLLLLGTMLDFSDATSRKVTGAFLQE 199
           NDLLE++LPATVSDYV+LVK H+ AG NYRF SRQLLLLG MLDFSD+TSRKV   F+QE
Sbjct: 46  NDLLERILPATVSDYVDLVKAHIDAGSNYRFASRQLLLLGAMLDFSDSTSRKVASLFVQE 105

Query: 198 VLHKPLENEVDVDGNQYIIGDGIHLGGDRDWALAVSELAKKVHASAGEFEEVVSGVVKEL 19
           +LHKPL++EVD +GN+ +IGDGI++GGD++WA AVS LAKKVHA  GEFEE+V G+++EL
Sbjct: 106 LLHKPLDHEVDDEGNRVVIGDGINIGGDKEWADAVSSLAKKVHAVTGEFEEIVLGIIEEL 165

Query: 18  ARPCRE 1
           ARPCRE
Sbjct: 166 ARPCRE 171


>ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Vitis vinifera]
           gi|297745068|emb|CBI38660.3| unnamed protein product
           [Vitis vinifera]
          Length = 1036

 Score =  189 bits (480), Expect = 2e-46
 Identities = 93/126 (73%), Positives = 109/126 (86%)
 Frame = -1

Query: 378 NDLLEKVLPATVSDYVELVKTHLVAGPNYRFTSRQLLLLGTMLDFSDATSRKVTGAFLQE 199
           NDLLE+VLPA VSDYVELVK HL AG NY F SRQLLLLG MLDFSDAT+RKV   F+QE
Sbjct: 382 NDLLERVLPAMVSDYVELVKAHLDAGSNYCFASRQLLLLGAMLDFSDATNRKVASGFVQE 441

Query: 198 VLHKPLENEVDVDGNQYIIGDGIHLGGDRDWALAVSELAKKVHASAGEFEEVVSGVVKEL 19
           +L KP+E EVD DGN+ ++GDG++LGGDR+WA AVS LA+KVHA+AGEFEEV+ GVV+EL
Sbjct: 442 LLRKPIEYEVDEDGNKVVMGDGVNLGGDREWADAVSGLARKVHAAAGEFEEVLLGVVEEL 501

Query: 18  ARPCRE 1
           A+PCRE
Sbjct: 502 AQPCRE 507


>gb|AFW86296.1| hypothetical protein ZEAMMB73_105589 [Zea mays]
          Length = 1047

 Score =  187 bits (474), Expect = 1e-45
 Identities = 90/126 (71%), Positives = 107/126 (84%)
 Frame = -1

Query: 378 NDLLEKVLPATVSDYVELVKTHLVAGPNYRFTSRQLLLLGTMLDFSDATSRKVTGAFLQE 199
           NDLL+ VLP+T++DYV+LVK HL AGPNY FTSRQLLLLG ML+FSD  +RK+  +FL E
Sbjct: 389 NDLLDSVLPSTITDYVDLVKAHLSAGPNYHFTSRQLLLLGEMLEFSDTMNRKIASSFLHE 448

Query: 198 VLHKPLENEVDVDGNQYIIGDGIHLGGDRDWALAVSELAKKVHASAGEFEEVVSGVVKEL 19
           +L +PLE+EVD DGNQ  IGDG+ LGGD+DWA AV+ELAKKVH+S GEFE VVS VV+EL
Sbjct: 449 LLVRPLEHEVDDDGNQIAIGDGVSLGGDKDWAKAVAELAKKVHSSVGEFEMVVSTVVEEL 508

Query: 18  ARPCRE 1
           ARPCRE
Sbjct: 509 ARPCRE 514


>gb|AFW86295.1| hypothetical protein ZEAMMB73_105589 [Zea mays]
          Length = 1048

 Score =  187 bits (474), Expect = 1e-45
 Identities = 90/126 (71%), Positives = 107/126 (84%)
 Frame = -1

Query: 378 NDLLEKVLPATVSDYVELVKTHLVAGPNYRFTSRQLLLLGTMLDFSDATSRKVTGAFLQE 199
           NDLL+ VLP+T++DYV+LVK HL AGPNY FTSRQLLLLG ML+FSD  +RK+  +FL E
Sbjct: 389 NDLLDSVLPSTITDYVDLVKAHLSAGPNYHFTSRQLLLLGEMLEFSDTMNRKIASSFLHE 448

Query: 198 VLHKPLENEVDVDGNQYIIGDGIHLGGDRDWALAVSELAKKVHASAGEFEEVVSGVVKEL 19
           +L +PLE+EVD DGNQ  IGDG+ LGGD+DWA AV+ELAKKVH+S GEFE VVS VV+EL
Sbjct: 449 LLVRPLEHEVDDDGNQIAIGDGVSLGGDKDWAKAVAELAKKVHSSVGEFEMVVSTVVEEL 508

Query: 18  ARPCRE 1
           ARPCRE
Sbjct: 509 ARPCRE 514


>emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]
          Length = 862

 Score =  186 bits (471), Expect = 2e-45
 Identities = 91/126 (72%), Positives = 108/126 (85%)
 Frame = -1

Query: 378 NDLLEKVLPATVSDYVELVKTHLVAGPNYRFTSRQLLLLGTMLDFSDATSRKVTGAFLQE 199
           NDLL++VLPA VSDYVELVK HL AG NY F SRQLLLLG MLDFSDAT+RKV   F+QE
Sbjct: 382 NDLLDRVLPAMVSDYVELVKAHLDAGSNYCFASRQLLLLGAMLDFSDATNRKVASGFVQE 441

Query: 198 VLHKPLENEVDVDGNQYIIGDGIHLGGDRDWALAVSELAKKVHASAGEFEEVVSGVVKEL 19
           +L KP+E EVD DGN+ ++GDG++LGGDR+WA AVS LA+KVHA+ GEFEEV+ GVV+EL
Sbjct: 442 LLXKPIEYEVDEDGNKVVMGDGVNLGGDREWADAVSGLARKVHAAXGEFEEVLLGVVEEL 501

Query: 18  ARPCRE 1
           A+PCRE
Sbjct: 502 AQPCRE 507


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