BLASTX nr result

ID: Coptis21_contig00028069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028069
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880101.1| hypothetical protein ARALYDRAFT_483550 [Arab...   154   9e-36
emb|CBI18663.3| unnamed protein product [Vitis vinifera]              152   3e-35
ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242...   152   3e-35
emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]   152   3e-35
ref|XP_002523580.1| conserved hypothetical protein [Ricinus comm...   149   3e-34

>ref|XP_002880101.1| hypothetical protein ARALYDRAFT_483550 [Arabidopsis lyrata subsp.
           lyrata] gi|297325940|gb|EFH56360.1| hypothetical protein
           ARALYDRAFT_483550 [Arabidopsis lyrata subsp. lyrata]
          Length = 564

 Score =  154 bits (388), Expect = 9e-36
 Identities = 68/91 (74%), Positives = 79/91 (86%)
 Frame = -2

Query: 274 PNLNQIHALLQTYSPWVYFHPDEQYLPSSVNWFFSNGALLYKQGDEHNPIPIDPAGANLP 95
           PN +QI  L QTYSPW+YFHPDE+YLPSSVNW+F+NGALLYK+G+E  PIPI+  G+NLP
Sbjct: 254 PNGSQIGELFQTYSPWIYFHPDEEYLPSSVNWYFNNGALLYKKGEESKPIPIESNGSNLP 313

Query: 94  QGGSIDGTYWLDLPIDGNAKERVKKGDLSSS 2
           QGGS DG+YWLDLPID N KERVKKGDL S+
Sbjct: 314 QGGSNDGSYWLDLPIDKNGKERVKKGDLQST 344


>emb|CBI18663.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score =  152 bits (384), Expect = 3e-35
 Identities = 67/91 (73%), Positives = 75/91 (82%)
 Frame = -2

Query: 274 PNLNQIHALLQTYSPWVYFHPDEQYLPSSVNWFFSNGALLYKQGDEHNPIPIDPAGANLP 95
           PNL Q+ AL+Q YSPWVY HPDEQYLPSSV+WFF NGALLY+QG+E  P+ IDP G+NLP
Sbjct: 184 PNLAQVDALVQAYSPWVYLHPDEQYLPSSVSWFFQNGALLYQQGEESKPVNIDPTGSNLP 243

Query: 94  QGGSIDGTYWLDLPIDGNAKERVKKGDLSSS 2
           QGGS DG YWLDLP+D  AKE VKKGDL  S
Sbjct: 244 QGGSNDGAYWLDLPVDAKAKETVKKGDLQDS 274


>ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera]
          Length = 559

 Score =  152 bits (384), Expect = 3e-35
 Identities = 67/91 (73%), Positives = 75/91 (82%)
 Frame = -2

Query: 274 PNLNQIHALLQTYSPWVYFHPDEQYLPSSVNWFFSNGALLYKQGDEHNPIPIDPAGANLP 95
           PNL Q+ AL+Q YSPWVY HPDEQYLPSSV+WFF NGALLY+QG+E  P+ IDP G+NLP
Sbjct: 252 PNLAQVDALVQAYSPWVYLHPDEQYLPSSVSWFFQNGALLYQQGEESKPVNIDPTGSNLP 311

Query: 94  QGGSIDGTYWLDLPIDGNAKERVKKGDLSSS 2
           QGGS DG YWLDLP+D  AKE VKKGDL  S
Sbjct: 312 QGGSNDGAYWLDLPVDAKAKETVKKGDLQDS 342


>emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]
          Length = 913

 Score =  152 bits (384), Expect = 3e-35
 Identities = 67/91 (73%), Positives = 75/91 (82%)
 Frame = -2

Query: 274 PNLNQIHALLQTYSPWVYFHPDEQYLPSSVNWFFSNGALLYKQGDEHNPIPIDPAGANLP 95
           PNL Q+ AL+Q YSPWVY HPDEQYLPSSV+WFF NGALLY+QG+E  P+ IDP G+NLP
Sbjct: 221 PNLAQVDALVQAYSPWVYLHPDEQYLPSSVSWFFQNGALLYQQGEESKPVNIDPTGSNLP 280

Query: 94  QGGSIDGTYWLDLPIDGNAKERVKKGDLSSS 2
           QGGS DG YWLDLP+D  AKE VKKGDL  S
Sbjct: 281 QGGSNDGAYWLDLPVDAKAKETVKKGDLQDS 311


>ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis]
           gi|223537142|gb|EEF38775.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 551

 Score =  149 bits (375), Expect = 3e-34
 Identities = 62/91 (68%), Positives = 77/91 (84%)
 Frame = -2

Query: 274 PNLNQIHALLQTYSPWVYFHPDEQYLPSSVNWFFSNGALLYKQGDEHNPIPIDPAGANLP 95
           PN NQI A+ Q YSPW+YFHPDE+YLPSSV+W+F+NGALLYKQG+E NP+ ++  G+NLP
Sbjct: 244 PNENQIQAIFQAYSPWIYFHPDEEYLPSSVSWYFNNGALLYKQGEESNPVKVETNGSNLP 303

Query: 94  QGGSIDGTYWLDLPIDGNAKERVKKGDLSSS 2
           QGG+ DG YWLDLP+D  AK+RVKKGDL  +
Sbjct: 304 QGGANDGVYWLDLPVDEKAKDRVKKGDLQET 334


Top