BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028062
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         100   1e-19
ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...    95   5e-18
gb|AAC13900.1|AAC13900 T1F9.10 [Arabidopsis thaliana]                  94   9e-18
ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cu...    93   2e-17

>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/55 (87%), Positives = 50/55 (90%)
 Frame = +3

Query: 3   LEWRWKCKPSSDNKKTTTEILDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLVQ 167
           LEWRWKC+PS D KKTTT ILDFLMDANIRLSEEVVRKTQSFE+LK EAEKCL Q
Sbjct: 104 LEWRWKCQPSPDTKKTTTLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQ 158


>ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|222864766|gb|EEF01897.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/55 (87%), Positives = 50/55 (90%)
 Frame = +3

Query: 3   LEWRWKCKPSSDNKKTTTEILDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLVQ 167
           LEWRWKC+PS D KKTTT ILDFLMDANIRLSEEVVRKTQSFE+LK EAEKCL Q
Sbjct: 104 LEWRWKCQPSPDTKKTTTLILDFLMDANIRLSEEVVRKTQSFEQLKGEAEKCLAQ 158


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/55 (80%), Positives = 48/55 (87%)
 Frame = +3

Query: 3   LEWRWKCKPSSDNKKTTTEILDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLVQ 167
           LEWRWKC+PS DNK TT  ILDFLMDANIRLSEEVV+KT SFE+LK EA+KCL Q
Sbjct: 111 LEWRWKCQPSPDNKMTTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQ 165


>gb|AAC13900.1|AAC13900 T1F9.10 [Arabidopsis thaliana]
          Length = 222

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/55 (78%), Positives = 48/55 (87%)
 Frame = +3

Query: 3   LEWRWKCKPSSDNKKTTTEILDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLVQ 167
           LEWRWKCKPS D+KK T  ILDFLM+ANIRLSEEVV KT+SFEK+K EAE+CL Q
Sbjct: 81  LEWRWKCKPSDDSKKITVRILDFLMEANIRLSEEVVNKTRSFEKMKSEAERCLAQ 135


>ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus]
           gi|449478860|ref|XP_004155437.1| PREDICTED: DNA repair
           protein XRCC4-like [Cucumis sativus]
          Length = 233

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/55 (78%), Positives = 48/55 (87%)
 Frame = +3

Query: 3   LEWRWKCKPSSDNKKTTTEILDFLMDANIRLSEEVVRKTQSFEKLKVEAEKCLVQ 167
           LEWRWKC+P+SDNK TT  IL+FLMDANIRLSEEVVRK QS E+LK E+EKCL Q
Sbjct: 110 LEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQ 164