BLASTX nr result

ID: Coptis21_contig00028056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028056
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002338933.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002327274.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002325969.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002334327.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|XP_002327275.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21

>ref|XP_002338933.1| predicted protein [Populus trichocarpa] gi|222873955|gb|EEF11086.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/68 (77%), Positives = 58/68 (85%)
 Frame = -2

Query: 204 VVEGVVDYKGHVVSDRSKYGGWKSASFVIGVEIAERFAYYGISSNLITYLTGPLHQSTAT 25
           +V+G VDYK      RS  GGW+SASF+IGVE+AERFAYYGISSNLITYLTGPL QSTAT
Sbjct: 14  IVDGSVDYKSRPAY-RSNSGGWRSASFIIGVEVAERFAYYGISSNLITYLTGPLGQSTAT 72

Query: 24  AAENVNVW 1
           AAENVNVW
Sbjct: 73  AAENVNVW 80


>ref|XP_002327274.1| predicted protein [Populus trichocarpa] gi|222835644|gb|EEE74079.1|
           predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/68 (77%), Positives = 58/68 (85%)
 Frame = -2

Query: 204 VVEGVVDYKGHVVSDRSKYGGWKSASFVIGVEIAERFAYYGISSNLITYLTGPLHQSTAT 25
           +V+G VDYK      RS  GGW+SASF+IGVE+AERFAYYGISSNLITYLTGPL QSTAT
Sbjct: 558 IVDGSVDYKSRPAY-RSNSGGWRSASFIIGVEVAERFAYYGISSNLITYLTGPLGQSTAT 616

Query: 24  AAENVNVW 1
           AAENVNVW
Sbjct: 617 AAENVNVW 624



 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 52/78 (66%), Positives = 56/78 (71%)
 Frame = -2

Query: 234 PLLGDTNSNVVVEGVVDYKGHVVSDRSKYGGWKSASFVIGVEIAERFAYYGISSNLITYL 55
           PLL DT     VE  VDYKG  V  R   GGWKS  F+I VE+AER AYYGI+ NLITYL
Sbjct: 6   PLLLDTP----VEDSVDYKGRPVY-RFNSGGWKSTLFIIVVEVAERSAYYGIAGNLITYL 60

Query: 54  TGPLHQSTATAAENVNVW 1
           TGPL QST TAAEN+NVW
Sbjct: 61  TGPLGQSTVTAAENMNVW 78


>ref|XP_002325969.1| predicted protein [Populus trichocarpa] gi|222862844|gb|EEF00351.1|
           predicted protein [Populus trichocarpa]
          Length = 1098

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = -2

Query: 204 VVEGVVDYKGHVVSDRSKYGGWKSASFVIGVEIAERFAYYGISSNLITYLTGPLHQSTAT 25
           +V+G VD+KG  V  RS  GGW+SA F+IGVE+AERFAYYGISSNLITYLTGPL QSTAT
Sbjct: 551 IVDGSVDHKGRPVY-RSNSGGWRSAGFIIGVEVAERFAYYGISSNLITYLTGPLGQSTAT 609

Query: 24  AAENVNVW 1
           AAENVN+W
Sbjct: 610 AAENVNLW 617



 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/67 (76%), Positives = 56/67 (83%)
 Frame = -2

Query: 201 VEGVVDYKGHVVSDRSKYGGWKSASFVIGVEIAERFAYYGISSNLITYLTGPLHQSTATA 22
           V G VDYKG+ V  RS  GGW+SASF+I VE+AERFAYYGISSNLITYLTGPL QSTA+A
Sbjct: 13  VNGSVDYKGNPVH-RSGSGGWRSASFIIAVEVAERFAYYGISSNLITYLTGPLGQSTASA 71

Query: 21  AENVNVW 1
           A NVN W
Sbjct: 72  AVNVNTW 78


>ref|XP_002334327.1| predicted protein [Populus trichocarpa] gi|222871062|gb|EEF08193.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/78 (70%), Positives = 62/78 (79%)
 Frame = -2

Query: 234 PLLGDTNSNVVVEGVVDYKGHVVSDRSKYGGWKSASFVIGVEIAERFAYYGISSNLITYL 55
           PLL DT     V+  VDYKG+ V  R   GGW+SA+F+IGVE+AERFAYYGISSNLITYL
Sbjct: 17  PLLNDT-----VDDCVDYKGNPVC-RYNSGGWRSAAFIIGVEVAERFAYYGISSNLITYL 70

Query: 54  TGPLHQSTATAAENVNVW 1
           TGPL QST TAA+NVNVW
Sbjct: 71  TGPLGQSTVTAAKNVNVW 88


>ref|XP_002327275.1| predicted protein [Populus trichocarpa] gi|222835645|gb|EEE74080.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  105 bits (263), Expect = 3e-21
 Identities = 55/78 (70%), Positives = 62/78 (79%)
 Frame = -2

Query: 234 PLLGDTNSNVVVEGVVDYKGHVVSDRSKYGGWKSASFVIGVEIAERFAYYGISSNLITYL 55
           PLL DT     V+  VDYKG+ V  R   GGW+SA+F+IGVE+AERFAYYGISSNLITYL
Sbjct: 17  PLLNDT-----VDDCVDYKGNPVC-RYNSGGWRSAAFIIGVEVAERFAYYGISSNLITYL 70

Query: 54  TGPLHQSTATAAENVNVW 1
           TGPL QST TAA+NVNVW
Sbjct: 71  TGPLGQSTVTAAKNVNVW 88


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