BLASTX nr result

ID: Coptis21_contig00028051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028051
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526388.1| conserved hypothetical protein [Ricinus comm...   336   5e-90
ref|XP_002263097.1| PREDICTED: transmembrane protein 56-like [Vi...   331   2e-88
emb|CBI15782.3| unnamed protein product [Vitis vinifera]              331   2e-88
ref|XP_003553160.1| PREDICTED: LOW QUALITY PROTEIN: transmembran...   328   2e-87
ref|NP_001242160.1| uncharacterized protein LOC100780614 [Glycin...   322   7e-86

>ref|XP_002526388.1| conserved hypothetical protein [Ricinus communis]
            gi|223534250|gb|EEF35964.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 267

 Score =  336 bits (862), Expect = 5e-90
 Identities = 162/252 (64%), Positives = 196/252 (77%)
 Frame = -3

Query: 1021 VMESFTGQSVWCVLCGIFMCIMVYRLTELYSRLFLNVYAKLTEREKMEWNNRGISTVHAI 842
            +M++     +  +  GI MCI+VY+LT + S L  N Y KLT+ +K+EWNNRG ST HAI
Sbjct: 13   IMDTVNPMWLASIFSGIIMCIIVYKLTGVLSLLCFNGYGKLTKAQKIEWNNRGFSTFHAI 72

Query: 841  AVAVGSFYFLVLSDLFGEGSHNQSILERSSPQSDALFGISIGYFVSDLGMILWYFPELGG 662
             VA  SFY L+LS LF E SH++ I+ RSS  S+++ G+SIGYF++DL MILWYFP LGG
Sbjct: 73   VVASASFYLLMLSGLFDEDSHDELIINRSSDISNSVLGVSIGYFLADLAMILWYFPALGG 132

Query: 661  LEYVLHHAXXXXXXXXXXXSGQGQFYILIVLFSESTTPFVNLRWYLDVAKQKSSKLYICN 482
            LEYVLHH            SGQ Q YIL++LFSESTTPFVNLRWYLDVA QKSSKLY+ N
Sbjct: 133  LEYVLHHGLSMYSIILALLSGQAQIYILMILFSESTTPFVNLRWYLDVAGQKSSKLYVSN 192

Query: 481  GVALFLGWLVARIILFIYFFIHMYLHFDEVKMIFPLGFYSLLTVPPILSVMNVFWFWKIA 302
            GV LFLGWLVARIILFI FF HM++HFD+VK +FPLGFYSLL+VPP+L VMNV WFWKIA
Sbjct: 193  GVLLFLGWLVARIILFICFFTHMFIHFDQVKKVFPLGFYSLLSVPPVLGVMNVVWFWKIA 252

Query: 301  RGMMKTLSKAKH 266
            RG++KTLS+AK+
Sbjct: 253  RGLIKTLSRAKN 264


>ref|XP_002263097.1| PREDICTED: transmembrane protein 56-like [Vitis vinifera]
          Length = 267

 Score =  331 bits (848), Expect = 2e-88
 Identities = 161/242 (66%), Positives = 186/242 (76%)
 Frame = -3

Query: 985 VLCGIFMCIMVYRLTELYSRLFLNVYAKLTEREKMEWNNRGISTVHAIAVAVGSFYFLVL 806
           V  G+  C +VY LT L S L    Y KL+  EK+EWNNRG ST HAI VAV S Y L++
Sbjct: 26  VFFGMIFCKIVYELTGLLSNLCFKGYTKLSNTEKVEWNNRGFSTFHAIIVAVASLYLLLV 85

Query: 805 SDLFGEGSHNQSILERSSPQSDALFGISIGYFVSDLGMILWYFPELGGLEYVLHHAXXXX 626
           SDLF E S ++SI+ R+S  SD + GISIGYF+SDL MILW FP LGGLEYVLHH     
Sbjct: 86  SDLFDEDSRDESIINRASTLSDTILGISIGYFLSDLAMILWNFPALGGLEYVLHHGLSMF 145

Query: 625 XXXXXXXSGQGQFYILIVLFSESTTPFVNLRWYLDVAKQKSSKLYICNGVALFLGWLVAR 446
                  SGQGQ YIL+VLFSESTTPFVNLRW+LDVA  KSS LYICNG+ALF GWLVAR
Sbjct: 146 SIFLSLISGQGQVYILMVLFSESTTPFVNLRWHLDVAGLKSSNLYICNGIALFFGWLVAR 205

Query: 445 IILFIYFFIHMYLHFDEVKMIFPLGFYSLLTVPPILSVMNVFWFWKIARGMMKTLSKAKH 266
           I+LFI+FF HM +HFDEVK IFPLGFYSLL VPP+L++MN FWFWKIA+G++KTLSKA+H
Sbjct: 206 ILLFIFFFYHMIIHFDEVKKIFPLGFYSLLMVPPVLAMMNAFWFWKIAKGLIKTLSKARH 265

Query: 265 VQ 260
            Q
Sbjct: 266 SQ 267


>emb|CBI15782.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  331 bits (848), Expect = 2e-88
 Identities = 161/242 (66%), Positives = 186/242 (76%)
 Frame = -3

Query: 985 VLCGIFMCIMVYRLTELYSRLFLNVYAKLTEREKMEWNNRGISTVHAIAVAVGSFYFLVL 806
           V  G+  C +VY LT L S L    Y KL+  EK+EWNNRG ST HAI VAV S Y L++
Sbjct: 16  VFFGMIFCKIVYELTGLLSNLCFKGYTKLSNTEKVEWNNRGFSTFHAIIVAVASLYLLLV 75

Query: 805 SDLFGEGSHNQSILERSSPQSDALFGISIGYFVSDLGMILWYFPELGGLEYVLHHAXXXX 626
           SDLF E S ++SI+ R+S  SD + GISIGYF+SDL MILW FP LGGLEYVLHH     
Sbjct: 76  SDLFDEDSRDESIINRASTLSDTILGISIGYFLSDLAMILWNFPALGGLEYVLHHGLSMF 135

Query: 625 XXXXXXXSGQGQFYILIVLFSESTTPFVNLRWYLDVAKQKSSKLYICNGVALFLGWLVAR 446
                  SGQGQ YIL+VLFSESTTPFVNLRW+LDVA  KSS LYICNG+ALF GWLVAR
Sbjct: 136 SIFLSLISGQGQVYILMVLFSESTTPFVNLRWHLDVAGLKSSNLYICNGIALFFGWLVAR 195

Query: 445 IILFIYFFIHMYLHFDEVKMIFPLGFYSLLTVPPILSVMNVFWFWKIARGMMKTLSKAKH 266
           I+LFI+FF HM +HFDEVK IFPLGFYSLL VPP+L++MN FWFWKIA+G++KTLSKA+H
Sbjct: 196 ILLFIFFFYHMIIHFDEVKKIFPLGFYSLLMVPPVLAMMNAFWFWKIAKGLIKTLSKARH 255

Query: 265 VQ 260
            Q
Sbjct: 256 SQ 257


>ref|XP_003553160.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 56-B-like
           [Glycine max]
          Length = 280

 Score =  328 bits (840), Expect = 2e-87
 Identities = 151/240 (62%), Positives = 187/240 (77%)
 Frame = -3

Query: 985 VLCGIFMCIMVYRLTELYSRLFLNVYAKLTEREKMEWNNRGISTVHAIAVAVGSFYFLVL 806
           V  GI  C++VYRLT + S L    Y KL+  EK+EWNNRG ST HA+  +  SFY LVL
Sbjct: 32  VFTGIIFCVVVYRLTAILSSLLFKGYGKLSSAEKIEWNNRGFSTFHALFASFTSFYLLVL 91

Query: 805 SDLFGEGSHNQSILERSSPQSDALFGISIGYFVSDLGMILWYFPELGGLEYVLHHAXXXX 626
           SD+F + SH + ++ RSS  S+++ GISIGYF++DL MILW+FP LGGLEYVLHH     
Sbjct: 92  SDIFNKDSHEELVINRSSTFSNSVLGISIGYFLADLAMILWHFPALGGLEYVLHHGLSMF 151

Query: 625 XXXXXXXSGQGQFYILIVLFSESTTPFVNLRWYLDVAKQKSSKLYICNGVALFLGWLVAR 446
                   GQGQ YIL+VLFSESTTPFVNLRW+LD+A  KSSKLY+ NG+ALF GWL+AR
Sbjct: 152 SIIQSLLCGQGQIYILMVLFSESTTPFVNLRWHLDIADLKSSKLYVWNGIALFFGWLIAR 211

Query: 445 IILFIYFFIHMYLHFDEVKMIFPLGFYSLLTVPPILSVMNVFWFWKIARGMMKTLSKAKH 266
           I LF++FFIHM+ HFDEVK I+PLGFYSLL VPP+L++MN+FWFWKIA+G++KT+SKAKH
Sbjct: 212 IFLFMFFFIHMWTHFDEVKEIYPLGFYSLLVVPPVLAMMNLFWFWKIAKGLVKTISKAKH 271


>ref|NP_001242160.1| uncharacterized protein LOC100780614 [Glycine max]
           gi|255640748|gb|ACU20658.1| unknown [Glycine max]
          Length = 280

 Score =  322 bits (826), Expect = 7e-86
 Identities = 152/240 (63%), Positives = 186/240 (77%)
 Frame = -3

Query: 985 VLCGIFMCIMVYRLTELYSRLFLNVYAKLTEREKMEWNNRGISTVHAIAVAVGSFYFLVL 806
           V  GI  C++VYRLT + S L    Y KL+  +K+EWNNRG ST HA+  +  SFY LVL
Sbjct: 32  VFTGIIFCVIVYRLTAILSSLLFKGYDKLSSAQKIEWNNRGFSTFHALFASFMSFYLLVL 91

Query: 805 SDLFGEGSHNQSILERSSPQSDALFGISIGYFVSDLGMILWYFPELGGLEYVLHHAXXXX 626
           SD+F + SH + I+ RSS  S+ + GISIGYF++DL MILW+FP LGGLEYVLHH     
Sbjct: 92  SDIFNKDSHEELIINRSSTFSNLVLGISIGYFLADLAMILWHFPALGGLEYVLHHGLSMF 151

Query: 625 XXXXXXXSGQGQFYILIVLFSESTTPFVNLRWYLDVAKQKSSKLYICNGVALFLGWLVAR 446
                  SGQG  YIL+VLFSESTTPFVNLRW+LD+A  KSSKLY+ NG+ALF GWL+AR
Sbjct: 152 SIIQSLLSGQGLIYILMVLFSESTTPFVNLRWHLDIAGLKSSKLYVWNGIALFFGWLIAR 211

Query: 445 IILFIYFFIHMYLHFDEVKMIFPLGFYSLLTVPPILSVMNVFWFWKIARGMMKTLSKAKH 266
           I LF++FFIHM+ HFDEVK IFPLGFYSLL VPP+L++MN+FWFWKIA+G++KT+SKAKH
Sbjct: 212 IFLFMFFFIHMWTHFDEVKEIFPLGFYSLLVVPPMLAMMNLFWFWKIAKGLVKTISKAKH 271


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