BLASTX nr result

ID: Coptis21_contig00028048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028048
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55551.1| mutator-like transposase [Rosa rugosa]                  73   2e-11
gb|AAF18645.1|AC006228_16 F5J5.10 [Arabidopsis thaliana]               65   6e-09
emb|CAB78061.1| putative protein [Arabidopsis thaliana]                64   1e-08
gb|AAB81877.1| predicted transposon protein [Arabidopsis thalian...    63   3e-08
emb|CAB51203.1| putative protein [Arabidopsis thaliana]                62   5e-08

>gb|AFP55551.1| mutator-like transposase [Rosa rugosa]
          Length = 721

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/89 (43%), Positives = 53/89 (59%)
 Frame = -3

Query: 270 PERRLTFITDRHHGLVTYIPIVFPDSYHSFCLWHLKNNIKTAVSSKSSKRSYIQKLLSDC 91
           P RR+TFI+DRH GLV+  P VFP++ H FC  HL +N+     + S  +  I  L   C
Sbjct: 404 PMRRVTFISDRHVGLVSAFPRVFPNNPHGFCFRHLMSNLSDKFPAGSYLKDRIPYLFMCC 463

Query: 90  AYAATNTEFDEAMGELRLVGGDEVDKFLE 4
           AY+ T+  ++  M  LR  GGD V +FLE
Sbjct: 464 AYSRTSEMYEFNMEILRSEGGDIVAQFLE 492


>gb|AAF18645.1|AC006228_16 F5J5.10 [Arabidopsis thaliana]
          Length = 727

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/96 (36%), Positives = 51/96 (53%)
 Frame = -3

Query: 303 WFLKNLKKVVLPERRLTFITDRHHGLVTYIPIVFPDSYHSFCLWHLKNNIKTAVSSKSSK 124
           WFL+ LK V     RL FI+DRH  +   +  V+P++ H+ C+WHL  N++  V  K  K
Sbjct: 430 WFLEKLKTVYSDVPRLVFISDRHQSIKKAVKTVYPNALHAACIWHLCQNMRDRV--KIDK 487

Query: 123 RSYIQKLLSDCAYAATNTEFDEAMGELRLVGGDEVD 16
                K   DCA+A T +EF++  G    +    VD
Sbjct: 488 DGAAVK-FRDCAHAYTESEFEKEFGHFTSLWPKAVD 522


>emb|CAB78061.1| putative protein [Arabidopsis thaliana]
          Length = 960

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/85 (38%), Positives = 48/85 (56%)
 Frame = -3

Query: 303 WFLKNLKKVVLPERRLTFITDRHHGLVTYIPIVFPDSYHSFCLWHLKNNIKTAVSSKSSK 124
           WFL+NLK V      L FI+DRH  +   +  V+P++ H+ C+WHL  N++  V  K  K
Sbjct: 456 WFLENLKTVYSDVPGLVFISDRHQSIKKAVKTVYPNALHAACIWHLCQNMRDRV--KIDK 513

Query: 123 RSYIQKLLSDCAYAATNTEFDEAMG 49
                K   DCA+A T +EF++  G
Sbjct: 514 DGAAVK-FRDCAHAYTESEFEKEFG 537


>gb|AAB81877.1| predicted transposon protein [Arabidopsis thaliana]
           gi|7267503|emb|CAB77986.1| predicted transposon protein
           [Arabidopsis thaliana]
          Length = 907

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/88 (35%), Positives = 44/88 (50%)
 Frame = -3

Query: 303 WFLKNLKKVVLPERRLTFITDRHHGLVTYIPIVFPDSYHSFCLWHLKNNIKTAVSSKSSK 124
           WF   LK V+  E  L F++DRH  ++  I  VFP++ H  C+WHL  N+K  V  K+ K
Sbjct: 458 WFFNKLKTVIPDELGLVFVSDRHQSIIKSIMHVFPNARHGHCVWHLSQNVKVRV--KTEK 515

Query: 123 RSYIQKLLSDCAYAATNTEFDEAMGELR 40
                  ++ CA+  T  EF       R
Sbjct: 516 EEAAANFIA-CAHVYTQFEFTREYARFR 542


>emb|CAB51203.1| putative protein [Arabidopsis thaliana]
          Length = 735

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/85 (37%), Positives = 47/85 (55%)
 Frame = -3

Query: 303 WFLKNLKKVVLPERRLTFITDRHHGLVTYIPIVFPDSYHSFCLWHLKNNIKTAVSSKSSK 124
           WFL+ LK V      L FI+DRH  +   +  V+P++ H+ C+WHL  N++  V  K  K
Sbjct: 405 WFLEKLKTVYSDVPGLVFISDRHQSIKKVVKTVYPNALHAACIWHLCQNMRDRV--KIDK 462

Query: 123 RSYIQKLLSDCAYAATNTEFDEAMG 49
                K   DCA+A T +EF++  G
Sbjct: 463 DGAAVK-FRDCAHAYTESEFEKEFG 486


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