BLASTX nr result

ID: Coptis21_contig00028045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028045
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281793.1| PREDICTED: uncharacterized protein LOC100265...   295   9e-78
emb|CAN66660.1| hypothetical protein VITISV_031720 [Vitis vinifera]   277   3e-72
ref|XP_003524710.1| PREDICTED: uncharacterized protein LOC100788...   268   2e-69
ref|XP_003549687.1| PREDICTED: uncharacterized protein LOC100818...   258   2e-66
ref|XP_002514727.1| exonuclease, putative [Ricinus communis] gi|...   248   2e-63

>ref|XP_002281793.1| PREDICTED: uncharacterized protein LOC100265514 [Vitis vinifera]
          Length = 497

 Score =  295 bits (756), Expect = 9e-78
 Identities = 158/308 (51%), Positives = 206/308 (66%), Gaps = 3/308 (0%)
 Frame = +2

Query: 5    TTNSWVSPNATTRSPINRLASQGERNLNSS--SSLVMLGDDQEVSPPNGRIADKVPIPVN 178
            TTNSWVSPNA TRS  N  AS    NLN S  SS +   +    SP      + +   V 
Sbjct: 192  TTNSWVSPNAVTRSRSNGKASPVGMNLNMSTPSSSIKFENHSISSPSTHSSMEGILNLVE 251

Query: 179  CNTLKPDPFDMGPLIDQIKVEPVQSDARMEEVPPQVSPEIFSSAVTCEGCSGYAGFLDPD 358
             NT +PDPF++G L  +I+ E ++ D  +EE P   S E+ S+    + C  YAGFLDP 
Sbjct: 252  PNTNQPDPFNLGALSSEIERESLKPDYALEEKPVTESLEMLSTTTASQDCCDYAGFLDPA 311

Query: 359  EXXXXXXXXXXXXXYRG-QRIQLLHKDVLLQLHCAKLRVRFGVSTKFTDNAGRPRLNIVV 535
            E             YRG +R+Q+LH DV L LHC +LRVRFG+ST+F D AGRPRL+ VV
Sbjct: 312  EVSVASISASFVPLYRGTRRMQILHNDVKLLLHCTQLRVRFGISTRFVDPAGRPRLSFVV 371

Query: 536  DSPSGLARVLNVCDHLAQRLTVDSGSSSIWRPVVIRKNDFLNSSTVRIHLPTLSNWSCGE 715
            D    L +VL+ CD LA +L+VDSGSSS WRPVVIRK  FLN+ T+R+ +PT++N     
Sbjct: 372  DGSPSLCQVLDACDQLAYKLSVDSGSSSEWRPVVIRKTGFLNTPTIRLSIPTVTN----G 427

Query: 716  DSSVYATEMYQRDTSGTSRRLVFNKFDATQLDSLLFPGVLIDTFVSLDVYDYQQSAGIRL 895
            D ++YATE+YQ+D SGT++RL+F++FDA +LD+L  PG L+DT+ +LD YDYQQ+AGI+L
Sbjct: 428  DIAIYATEIYQKDPSGTTQRLIFSRFDAAELDTLFVPGTLVDTYFALDPYDYQQNAGIKL 487

Query: 896  VAKKLIIH 919
            VAKKLIIH
Sbjct: 488  VAKKLIIH 495


>emb|CAN66660.1| hypothetical protein VITISV_031720 [Vitis vinifera]
          Length = 535

 Score =  277 bits (709), Expect = 3e-72
 Identities = 158/346 (45%), Positives = 206/346 (59%), Gaps = 41/346 (11%)
 Frame = +2

Query: 5    TTNSWVSPNATTRSPINRLASQGERNLNSS--SSLVMLGDDQEVSPPNGRIADKVPIPVN 178
            TTNSWVSPNA TRS  N  AS    NLN S  SS +   +    SP      + +   V 
Sbjct: 192  TTNSWVSPNAVTRSRSNGKASPVGMNLNMSTPSSSIKFENHSISSPSTHSSMEGILNLVE 251

Query: 179  CNTLKPDPFDMGPLIDQIKVEPVQSDARMEEVPPQVSPEIFSSAVTCEGCSGYAGFLDPD 358
             NT +PDPF++G L  +I+ E ++ D  +EE P   S E+ S+    + C  YAGFLDP 
Sbjct: 252  PNTNRPDPFNLGALSSEIERESLKPDYALEEKPVTESLEMLSTTTASQDCCDYAGFLDPA 311

Query: 359  EXXXXXXXXXXXXXYRG-QRIQLLHKDVLLQLHCAKLRVRFGVSTKFTDNAGRPRLNIVV 535
            E             YRG +R+Q+LH DV L LHC +LRVRFG+ST+F D AGRPRL+ VV
Sbjct: 312  EVSVASISASFVPLYRGTRRMQILHNDVKLLLHCTQLRVRFGISTRFVDPAGRPRLSFVV 371

Query: 536  DSPSGLARVLNVCDHLAQRLTVDSGSSSIWRPVVIRKNDFLNSSTVRIH----------- 682
            D    L +VL+ CD LA +L+VDSGSSS WRPVVIRK  FLN+ T+R+            
Sbjct: 372  DGSPSLCQVLDACDQLAYKLSVDSGSSSEWRPVVIRKTGFLNTPTIRLRQVLILFAFYEN 431

Query: 683  ---------------------------LPTLSNWSCGEDSSVYATEMYQRDTSGTSRRLV 781
                                       +PT++N     D ++YATE+YQ+D SGT++RL+
Sbjct: 432  KQYAVGVWLLLSLLVLMCKNCKMQRKIIPTVTN----GDIAIYATEIYQKDPSGTTQRLI 487

Query: 782  FNKFDATQLDSLLFPGVLIDTFVSLDVYDYQQSAGIRLVAKKLIIH 919
            F++FDA +LD+L  PG L+DT+ +LD YDYQQ+AGI+LVAKKLIIH
Sbjct: 488  FSRFDAAELDTLFVPGTLVDTYFALDPYDYQQNAGIKLVAKKLIIH 533


>ref|XP_003524710.1| PREDICTED: uncharacterized protein LOC100788659 [Glycine max]
          Length = 501

 Score =  268 bits (685), Expect = 2e-69
 Identities = 153/319 (47%), Positives = 201/319 (63%), Gaps = 13/319 (4%)
 Frame = +2

Query: 5    TTNSWVSPNATTRSPIN-RLASQ-GERNLNSSSSLVMLGDDQE----------VSPPNGR 148
            T NSWVSPNATTRS  N +  SQ G  N+N  S L     + +          +S P G 
Sbjct: 190  TANSWVSPNATTRSRSNGKSPSQWGLLNINKDSVLSSPATESKDKNRPIISFALSSPKGN 249

Query: 149  IADKVPIPVNCNTLKPDPFDMGPLIDQIKVEPVQSDARMEEVPPQVSPEIFSSAVTCEGC 328
            +++      + N  + DPF++  L  +IK E ++SD  +EE P Q S ++ SS+   + C
Sbjct: 250  VSNIA----DPNMDQSDPFNLSTLEAEIKRESIKSDVALEEKPMQESTDLASSSSVSQPC 305

Query: 329  SGYAGFLDPDEXXXXXXXXXXXXXYRG-QRIQLLHKDVLLQLHCAKLRVRFGVSTKFTDN 505
            S     L+PD              +RG QRI+LLH+  L QLHC  L+VRFG+++KF D+
Sbjct: 306  SSSIAVLEPDGICIPSIDASLVPSFRGSQRIELLHEGFLFQLHCTDLKVRFGINSKFFDS 365

Query: 506  AGRPRLNIVVDSPSGLARVLNVCDHLAQRLTVDSGSSSIWRPVVIRKNDFLNSSTVRIHL 685
            AGRPRL+ VVD    L  VL+ CD +AQ+LTVDSGSSS WRPVVIRK  F N  TVR+H+
Sbjct: 366  AGRPRLSFVVDPSPSLCNVLDACDRVAQKLTVDSGSSSDWRPVVIRKEGFFNYPTVRLHI 425

Query: 686  PTLSNWSCGEDSSVYATEMYQRDTSGTSRRLVFNKFDATQLDSLLFPGVLIDTFVSLDVY 865
            PT    +   D ++YATE+YQR++SGT +RL+F+KFDA +L SL  PG  +D   SLD Y
Sbjct: 426  PT----AVVADIAIYATEIYQRESSGTVQRLLFSKFDAAELGSLFMPGTFVDAVFSLDPY 481

Query: 866  DYQQSAGIRLVAKKLIIHS 922
            DYQQ+AGI+LVAKKLIIHS
Sbjct: 482  DYQQNAGIKLVAKKLIIHS 500


>ref|XP_003549687.1| PREDICTED: uncharacterized protein LOC100818863 [Glycine max]
          Length = 501

 Score =  258 bits (659), Expect = 2e-66
 Identities = 144/314 (45%), Positives = 193/314 (61%), Gaps = 9/314 (2%)
 Frame = +2

Query: 5    TTNSWVSPNATTRSPINR--LASQGERNLNSSSSLVMLGDDQE------VSPPNGRIADK 160
            T NSWVSPN+ TRS  N   L+  G  N+N  S L     + +      +S     +   
Sbjct: 190  TANSWVSPNSITRSRSNEKSLSQGGLLNINKDSVLSSPATESKDKNHPIISFALSSLKGN 249

Query: 161  VPIPVNCNTLKPDPFDMGPLIDQIKVEPVQSDARMEEVPPQVSPEIFSSAVTCEGCSGYA 340
            VP   + N  + DPF++  L  +IK E ++SDA MEE   Q SP++ SS+   + CS   
Sbjct: 250  VPNIADPNIDQSDPFNLSALEAEIKRESIKSDAAMEEKTMQESPDLASSSSVSQPCSSSI 309

Query: 341  GFLDPDEXXXXXXXXXXXXXYRG-QRIQLLHKDVLLQLHCAKLRVRFGVSTKFTDNAGRP 517
              L+PD              + G QRI+LLH+     LHC  L+VRFG++++F D AGRP
Sbjct: 310  AVLEPDGICIPFIDASLVPSFLGSQRIELLHEGFPFLLHCTDLKVRFGINSRFFDRAGRP 369

Query: 518  RLNIVVDSPSGLARVLNVCDHLAQRLTVDSGSSSIWRPVVIRKNDFLNSSTVRIHLPTLS 697
            RL+ VVD    L  VL+ CD +AQ+L +DSGSSS WRPVVIRK  F N  T+R+H+PT  
Sbjct: 370  RLSFVVDPSPSLCNVLDACDRVAQKLNMDSGSSSDWRPVVIRKEGFFNYPTIRLHIPT-- 427

Query: 698  NWSCGEDSSVYATEMYQRDTSGTSRRLVFNKFDATQLDSLLFPGVLIDTFVSLDVYDYQQ 877
              +   D  +YATE+YQR++SGT +RL+F+KFDA +L SL  PG  +D F+SLD YDYQQ
Sbjct: 428  --AVVADVDIYATEIYQRESSGTVQRLLFSKFDAAELGSLFMPGTFVDAFLSLDPYDYQQ 485

Query: 878  SAGIRLVAKKLIIH 919
            +AGI+LV+KKLIIH
Sbjct: 486  NAGIKLVSKKLIIH 499


>ref|XP_002514727.1| exonuclease, putative [Ricinus communis] gi|223546331|gb|EEF47833.1|
            exonuclease, putative [Ricinus communis]
          Length = 501

 Score =  248 bits (632), Expect = 2e-63
 Identities = 144/310 (46%), Positives = 192/310 (61%), Gaps = 9/310 (2%)
 Frame = +2

Query: 14   SWVSPNATTRS------PINRLASQGERNLNSSS--SLVMLGDDQEVSPPNGRIADKVPI 169
            SWVSPNATTRS      P+ R  +  +   +SS   ++ + G + E S P   +   V  
Sbjct: 197  SWVSPNATTRSRKNGKSPLERPGTDVDAPSSSSKFENISLAGHEPERSHPIIYLLTSV-- 254

Query: 170  PVNCNTLKPDPFDMGPLIDQIKVEPVQSDARMEEVPPQVSPEIFSSAVTCEGCSGYAGFL 349
                NT + DPFDMG L +++    +Q D  MEE     S E+ S     +G S YAGFL
Sbjct: 255  --GSNTTQTDPFDMGTLSNEMTTSSLQQDVTMEEKSLTESSEMPSLVTVRDGGSAYAGFL 312

Query: 350  DPDEXXXXXXXXXXXXXYRG-QRIQLLHKDVLLQLHCAKLRVRFGVSTKFTDNAGRPRLN 526
            + ++             +RG QR+ LLH+DV+LQL C +LRVRFG+STKF D+AGRPRL+
Sbjct: 313  ETEKVSISSIRASFVPLFRGAQRMVLLHEDVILQLCCPRLRVRFGLSTKFVDSAGRPRLS 372

Query: 527  IVVDSPSGLARVLNVCDHLAQRLTVDSGSSSIWRPVVIRKNDFLNSSTVRIHLPTLSNWS 706
             VVD+P  L  +L+ CD  AQ+L+V+SGS+S WR VV RK  F+N   VR+H+PT  N  
Sbjct: 373  FVVDAPPNLCSILDTCDGSAQKLSVESGSTSDWRQVVSRKPGFVNYPIVRLHIPTAVN-- 430

Query: 707  CGEDSSVYATEMYQRDTSGTSRRLVFNKFDATQLDSLLFPGVLIDTFVSLDVYDYQQSAG 886
               D + YATE+YQRD+SG   +LVF+KF+A +L++    G  +D + SL  YDYQQSAG
Sbjct: 431  --GDVAQYATEIYQRDSSGAMEKLVFSKFEAAELETWFISGTFLDAYFSLHPYDYQQSAG 488

Query: 887  IRLVAKKLII 916
            IRLVAKKLII
Sbjct: 489  IRLVAKKLII 498


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