BLASTX nr result

ID: Coptis21_contig00028042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028042
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515102.1| arv1, putative [Ricinus communis] gi|2235455...   111   7e-23
ref|XP_002268438.1| PREDICTED: protein arv1 homolog [Vitis vinif...   110   9e-23
ref|XP_002320240.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_003624961.1| ARV1 [Medicago truncatula] gi|355499976|gb|A...   108   3e-22
ref|XP_002874972.1| hypothetical protein ARALYDRAFT_490425 [Arab...   106   2e-21

>ref|XP_002515102.1| arv1, putative [Ricinus communis] gi|223545582|gb|EEF47086.1| arv1,
           putative [Ricinus communis]
          Length = 187

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/90 (56%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
 Frame = +1

Query: 133 VFKCVHCGYKVNSLFIQYSPGNIRLMKCENCKEVADEYIECEXXXXXXXXXXQKQKAYSH 312
           +++CV CG+ V SL++QYSPGNIRLMKCENCK VADEYIECE           K KAY H
Sbjct: 1   MYRCVECGFGVKSLYVQYSPGNIRLMKCENCKAVADEYIECEFMIMLIDLILHKPKAYRH 60

Query: 313 LLFN--TRDNVDFEGIVWKLGFICLLLDAY 396
           LL+N   ++ V+ EG++WK     LLLDAY
Sbjct: 61  LLYNVLNQETVNLEGLIWKSAISFLLLDAY 90


>ref|XP_002268438.1| PREDICTED: protein arv1 homolog [Vitis vinifera]
           gi|296089029|emb|CBI38732.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/91 (56%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
 Frame = +1

Query: 130 MVFKCVHCGYKVNSLFIQYSPGNIRLMKCENCKEVADEYIECEXXXXXXXXXXQKQKAYS 309
           M  +C+HCG+ + +LF+QYSPGNIRLMKCENCK VADEYIECE           K KAY 
Sbjct: 1   MELRCIHCGFPIKTLFLQYSPGNIRLMKCENCKAVADEYIECESMIVLIDLILHKPKAYR 60

Query: 310 HLLFN--TRDNVDFEGIVWKLGFICLLLDAY 396
           HLLFN      ++F+G++WK     LLLDAY
Sbjct: 61  HLLFNLLNPQTLNFQGLLWKSALGFLLLDAY 91


>ref|XP_002320240.1| predicted protein [Populus trichocarpa] gi|222861013|gb|EEE98555.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
 Frame = +1

Query: 139 KCVHCGYKVNSLFIQYSPGNIRLMKCENCKEVADEYIECEXXXXXXXXXXQKQKAYSHLL 318
           +CV CG+ + +LF+QYSPGNIRLM+CENCK VADEYIECE           K KAY HLL
Sbjct: 4   RCVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLL 63

Query: 319 FN--TRDNVDFEGIVWKLGFICLLLDAY 396
           FN   +  V+FEG +WK  F  LLLDAY
Sbjct: 64  FNVINQHTVNFEGSLWKSIFAFLLLDAY 91


>ref|XP_003624961.1| ARV1 [Medicago truncatula] gi|355499976|gb|AES81179.1| ARV1
           [Medicago truncatula]
          Length = 293

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
 Frame = +1

Query: 130 MVFKCVHCGYKVNSLFIQYSPGNIRLMKCENCKEVADEYIECEXXXXXXXXXXQKQKAYS 309
           M ++C+ CG+ +N+L+ QYSPGNIRLMKCENCK VADEYIECE           K KAY 
Sbjct: 1   MGYRCIQCGFTINTLYFQYSPGNIRLMKCENCKAVADEYIECEIMIIVIDIILHKPKAYR 60

Query: 310 HLLFN--TRDNVDFEGIVWKLGFICLLLDA 393
           HLL+N   ++ + F+G++WKL  I LL DA
Sbjct: 61  HLLYNVINQEAMKFQGLLWKLAVIFLLFDA 90


>ref|XP_002874972.1| hypothetical protein ARALYDRAFT_490425 [Arabidopsis lyrata subsp.
           lyrata] gi|297320809|gb|EFH51231.1| hypothetical protein
           ARALYDRAFT_490425 [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
 Frame = +1

Query: 142 CVHCGYKVNSLFIQYSPGNIRLMKCENCKEVADEYIECEXXXXXXXXXXQKQKAYSHLLF 321
           CV CG+KV SLFIQYSPGN RLMKCENC EVADEY+ECE           K KAY HLL+
Sbjct: 8   CVECGHKVKSLFIQYSPGNFRLMKCENCNEVADEYVECELLIIFIDLILHKTKAYRHLLY 67

Query: 322 N--TRDNVDFEGIVWKLGFICLLLDAY 396
           N   +++V+ + ++WKL    LLLD Y
Sbjct: 68  NVFNQESVNIQHLLWKLVLAYLLLDTY 94


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