BLASTX nr result
ID: Coptis21_contig00028042
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00028042 (457 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515102.1| arv1, putative [Ricinus communis] gi|2235455... 111 7e-23 ref|XP_002268438.1| PREDICTED: protein arv1 homolog [Vitis vinif... 110 9e-23 ref|XP_002320240.1| predicted protein [Populus trichocarpa] gi|2... 109 2e-22 ref|XP_003624961.1| ARV1 [Medicago truncatula] gi|355499976|gb|A... 108 3e-22 ref|XP_002874972.1| hypothetical protein ARALYDRAFT_490425 [Arab... 106 2e-21 >ref|XP_002515102.1| arv1, putative [Ricinus communis] gi|223545582|gb|EEF47086.1| arv1, putative [Ricinus communis] Length = 187 Score = 111 bits (277), Expect = 7e-23 Identities = 51/90 (56%), Positives = 63/90 (70%), Gaps = 2/90 (2%) Frame = +1 Query: 133 VFKCVHCGYKVNSLFIQYSPGNIRLMKCENCKEVADEYIECEXXXXXXXXXXQKQKAYSH 312 +++CV CG+ V SL++QYSPGNIRLMKCENCK VADEYIECE K KAY H Sbjct: 1 MYRCVECGFGVKSLYVQYSPGNIRLMKCENCKAVADEYIECEFMIMLIDLILHKPKAYRH 60 Query: 313 LLFN--TRDNVDFEGIVWKLGFICLLLDAY 396 LL+N ++ V+ EG++WK LLLDAY Sbjct: 61 LLYNVLNQETVNLEGLIWKSAISFLLLDAY 90 >ref|XP_002268438.1| PREDICTED: protein arv1 homolog [Vitis vinifera] gi|296089029|emb|CBI38732.3| unnamed protein product [Vitis vinifera] Length = 248 Score = 110 bits (276), Expect = 9e-23 Identities = 51/91 (56%), Positives = 62/91 (68%), Gaps = 2/91 (2%) Frame = +1 Query: 130 MVFKCVHCGYKVNSLFIQYSPGNIRLMKCENCKEVADEYIECEXXXXXXXXXXQKQKAYS 309 M +C+HCG+ + +LF+QYSPGNIRLMKCENCK VADEYIECE K KAY Sbjct: 1 MELRCIHCGFPIKTLFLQYSPGNIRLMKCENCKAVADEYIECESMIVLIDLILHKPKAYR 60 Query: 310 HLLFN--TRDNVDFEGIVWKLGFICLLLDAY 396 HLLFN ++F+G++WK LLLDAY Sbjct: 61 HLLFNLLNPQTLNFQGLLWKSALGFLLLDAY 91 >ref|XP_002320240.1| predicted protein [Populus trichocarpa] gi|222861013|gb|EEE98555.1| predicted protein [Populus trichocarpa] Length = 232 Score = 109 bits (273), Expect = 2e-22 Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 2/88 (2%) Frame = +1 Query: 139 KCVHCGYKVNSLFIQYSPGNIRLMKCENCKEVADEYIECEXXXXXXXXXXQKQKAYSHLL 318 +CV CG+ + +LF+QYSPGNIRLM+CENCK VADEYIECE K KAY HLL Sbjct: 4 RCVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLL 63 Query: 319 FN--TRDNVDFEGIVWKLGFICLLLDAY 396 FN + V+FEG +WK F LLLDAY Sbjct: 64 FNVINQHTVNFEGSLWKSIFAFLLLDAY 91 >ref|XP_003624961.1| ARV1 [Medicago truncatula] gi|355499976|gb|AES81179.1| ARV1 [Medicago truncatula] Length = 293 Score = 108 bits (271), Expect = 3e-22 Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 2/90 (2%) Frame = +1 Query: 130 MVFKCVHCGYKVNSLFIQYSPGNIRLMKCENCKEVADEYIECEXXXXXXXXXXQKQKAYS 309 M ++C+ CG+ +N+L+ QYSPGNIRLMKCENCK VADEYIECE K KAY Sbjct: 1 MGYRCIQCGFTINTLYFQYSPGNIRLMKCENCKAVADEYIECEIMIIVIDIILHKPKAYR 60 Query: 310 HLLFN--TRDNVDFEGIVWKLGFICLLLDA 393 HLL+N ++ + F+G++WKL I LL DA Sbjct: 61 HLLYNVINQEAMKFQGLLWKLAVIFLLFDA 90 >ref|XP_002874972.1| hypothetical protein ARALYDRAFT_490425 [Arabidopsis lyrata subsp. lyrata] gi|297320809|gb|EFH51231.1| hypothetical protein ARALYDRAFT_490425 [Arabidopsis lyrata subsp. lyrata] Length = 228 Score = 106 bits (265), Expect = 2e-21 Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 2/87 (2%) Frame = +1 Query: 142 CVHCGYKVNSLFIQYSPGNIRLMKCENCKEVADEYIECEXXXXXXXXXXQKQKAYSHLLF 321 CV CG+KV SLFIQYSPGN RLMKCENC EVADEY+ECE K KAY HLL+ Sbjct: 8 CVECGHKVKSLFIQYSPGNFRLMKCENCNEVADEYVECELLIIFIDLILHKTKAYRHLLY 67 Query: 322 N--TRDNVDFEGIVWKLGFICLLLDAY 396 N +++V+ + ++WKL LLLD Y Sbjct: 68 NVFNQESVNIQHLLWKLVLAYLLLDTY 94