BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028035
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20033.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containi...   134   8e-30
emb|CBI25159.3| unnamed protein product [Vitis vinifera]              128   4e-28
ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28
ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25

>emb|CBI20033.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  136 bits (342), Expect = 2e-30
 Identities = 65/120 (54%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
 Frame = +2

Query: 140 KMSSRKIFKPITKSLQRPTKNSIITKPPEDYPA-PLPIVSLSLTTQDQLFQFLKTHLKPP 316
           KM+  K+ + + K L  P++ +  T  P    + P+P +SL+ T+  QL QFLK HL P 
Sbjct: 31  KMAMNKLRQTLPKPLHPPSQFTPPTASPNLISSTPIPTLSLANTSHHQLHQFLKAHLTPS 90

Query: 317 FNSQHLLHFLTKKLHYHPKFTQFDLHIFQWASKVESFRHDHSTYEWMIRTLAVTDRFNDL 496
           F  Q LL FL  KLHYHPKF+ FDLHIF WA+ ++SFRHDHSTYEWM++TLA+TDRF+DL
Sbjct: 91  FTPQDLLIFLKNKLHYHPKFSHFDLHIFTWAATIDSFRHDHSTYEWMVKTLAITDRFDDL 150


>ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Vitis vinifera]
          Length = 480

 Score =  134 bits (337), Expect = 8e-30
 Identities = 64/119 (53%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
 Frame = +2

Query: 143 MSSRKIFKPITKSLQRPTKNSIITKPPEDYPA-PLPIVSLSLTTQDQLFQFLKTHLKPPF 319
           M+  K+ + + K L  P++ +  T  P    + P+P +SL+ T+  QL QFLK HL P F
Sbjct: 1   MAMNKLRQTLPKPLHPPSQFTPPTASPNLISSTPIPTLSLANTSHHQLHQFLKAHLTPSF 60

Query: 320 NSQHLLHFLTKKLHYHPKFTQFDLHIFQWASKVESFRHDHSTYEWMIRTLAVTDRFNDL 496
             Q LL FL  KLHYHPKF+ FDLHIF WA+ ++SFRHDHSTYEWM++TLA+TDRF+DL
Sbjct: 61  TPQDLLIFLKNKLHYHPKFSHFDLHIFTWAATIDSFRHDHSTYEWMVKTLAITDRFDDL 119


>emb|CBI25159.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/112 (55%), Positives = 75/112 (66%), Gaps = 5/112 (4%)
 Frame = +2

Query: 176 KSLQRPTKNSIITKPPEDYP-----APLPIVSLSLTTQDQLFQFLKTHLKPPFNSQHLLH 340
           K+L +P        PP   P      P+P +SL+ T+  QL QFLK HL P F  Q LL 
Sbjct: 116 KTLPKPLHPLSQFTPPTASPNLIPSTPIPTLSLANTSHHQLHQFLKAHLTPSFTPQDLLI 175

Query: 341 FLTKKLHYHPKFTQFDLHIFQWASKVESFRHDHSTYEWMIRTLAVTDRFNDL 496
           FL  KLHYHPKF  FDLHIF WA+ ++SFRHD STYEWM++TLA+TDRF+DL
Sbjct: 176 FLKNKLHYHPKFAHFDLHIFTWAATIDSFRHDQSTYEWMVKTLAITDRFDDL 227


>ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Vitis vinifera]
          Length = 588

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/112 (55%), Positives = 75/112 (66%), Gaps = 5/112 (4%)
 Frame = +2

Query: 176 KSLQRPTKNSIITKPPEDYP-----APLPIVSLSLTTQDQLFQFLKTHLKPPFNSQHLLH 340
           K+L +P        PP   P      P+P +SL+ T+  QL QFLK HL P F  Q LL 
Sbjct: 116 KTLPKPLHPLSQFTPPTASPNLIPSTPIPTLSLANTSHHQLHQFLKAHLTPSFTPQDLLI 175

Query: 341 FLTKKLHYHPKFTQFDLHIFQWASKVESFRHDHSTYEWMIRTLAVTDRFNDL 496
           FL  KLHYHPKF  FDLHIF WA+ ++SFRHD STYEWM++TLA+TDRF+DL
Sbjct: 176 FLKNKLHYHPKFAHFDLHIFTWAATIDSFRHDQSTYEWMVKTLAITDRFDDL 227


>ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36240-like [Cucumis sativus]
           gi|449487417|ref|XP_004157616.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g36240-like [Cucumis sativus]
          Length = 486

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/122 (50%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
 Frame = +2

Query: 155 KIFKPITKSLQRPTK-------NSIITKPPEDYPAPLPIVSLSLTTQ-DQLFQFLKTHLK 310
           K   PI + LQ P         N+I+   P+   APL  +S S     +QL  FLK+HL 
Sbjct: 2   KKLPPILRKLQTPQPTPPSPLPNAILPPSPQTPVAPLLNLSFSSPHHYNQLLHFLKSHLT 61

Query: 311 PPFNSQHLLHFLTKKLHYHPKFTQFDLHIFQWASKVESFRHDHSTYEWMIRTLAVTDRFN 490
            PF    LLHFL  KLH+HPKFT +D H+F WAS ++SFRHDHST+ WM RTLA TDRF 
Sbjct: 62  FPFTPNSLLHFLKSKLHFHPKFTHYDFHVFNWASTIDSFRHDHSTFAWMARTLATTDRFF 121

Query: 491 DL 496
           +L
Sbjct: 122 EL 123