BLASTX nr result
ID: Coptis21_contig00028009
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00028009 (1345 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285659.1| PREDICTED: E3 ubiquitin-protein ligase SINAT... 60 1e-06 emb|CAN66717.1| hypothetical protein VITISV_039358 [Vitis vinifera] 60 2e-06 ref|XP_002280243.1| PREDICTED: E3 ubiquitin-protein ligase SINAT... 57 8e-06 >ref|XP_002285659.1| PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Vitis vinifera] gi|297746416|emb|CBI16472.3| unnamed protein product [Vitis vinifera] Length = 308 Score = 60.5 bits (145), Expect = 1e-06 Identities = 29/55 (52%), Positives = 36/55 (65%) Frame = -1 Query: 166 MAPGGRICKEVLESLTTVTDYDTVTAKADVKSSASARVTLTSGGKLGISSTNGVH 2 MAPGG ICKEV ES + DYD TA +++SS + T GGK G+ ST+GVH Sbjct: 1 MAPGGGICKEVCESRSAFADYDVTTANLELRSSPFRKATTGVGGKHGMPSTSGVH 55 >emb|CAN66717.1| hypothetical protein VITISV_039358 [Vitis vinifera] Length = 308 Score = 59.7 bits (143), Expect = 2e-06 Identities = 29/55 (52%), Positives = 35/55 (63%) Frame = -1 Query: 166 MAPGGRICKEVLESLTTVTDYDTVTAKADVKSSASARVTLTSGGKLGISSTNGVH 2 MAPGG ICKEV ES + DYD TA +++SS + T GGK G ST+GVH Sbjct: 1 MAPGGGICKEVCESRSAFADYDVTTANLELRSSPFRKATTGVGGKHGXPSTSGVH 55 >ref|XP_002280243.1| PREDICTED: E3 ubiquitin-protein ligase SINAT2 isoform 1 [Vitis vinifera] gi|4584257|emb|CAB40578.1| SINA2p [Vitis vinifera] gi|297739816|emb|CBI29998.3| unnamed protein product [Vitis vinifera] Length = 315 Score = 57.4 bits (137), Expect = 8e-06 Identities = 32/55 (58%), Positives = 35/55 (63%) Frame = -1 Query: 166 MAPGGRICKEVLESLTTVTDYDTVTAKADVKSSASARVTLTSGGKLGISSTNGVH 2 MAPGG KEVLES +TVTDYD KAD + A+ T GK GISS NGVH Sbjct: 1 MAPGGSTYKEVLESHSTVTDYDIAMTKADT-NLTPAKTTAGLSGKKGISSPNGVH 54