BLASTX nr result

ID: Coptis21_contig00028002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00028002
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285305.1| PREDICTED: umecyanin [Vitis vinifera] gi|297...    67   2e-09
emb|CAN60010.1| hypothetical protein VITISV_018635 [Vitis vinifera]    67   2e-09
emb|CBI36327.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_002266874.1| PREDICTED: cucumber peeling cupredoxin-like ...    64   1e-08
ref|XP_002265643.1| PREDICTED: blue copper protein-like [Vitis v...    64   1e-08

>ref|XP_002285305.1| PREDICTED: umecyanin [Vitis vinifera] gi|297738973|emb|CBI28218.3|
           unnamed protein product [Vitis vinifera]
          Length = 153

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = -2

Query: 228 MASHMGVIGCXXXXXXXXXXXXXXXXV-VLGNSGWSLPTNGDGTYSTWAAGQDFRVGDTL 52
           MA+ + +IGC                  V GN  WS+PT G+  Y+TWA+G+DF++GDT+
Sbjct: 1   MAARVEIIGCLIVVAVLLQGAAAADTHHVGGNISWSIPTEGESAYTTWASGEDFKLGDTI 60

Query: 51  VFNFPTGLHAVAEVTK 4
           VFN+ TG H VA V+K
Sbjct: 61  VFNW-TGTHTVARVSK 75


>emb|CAN60010.1| hypothetical protein VITISV_018635 [Vitis vinifera]
          Length = 153

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = -2

Query: 228 MASHMGVIGCXXXXXXXXXXXXXXXXV-VLGNSGWSLPTNGDGTYSTWAAGQDFRVGDTL 52
           MA+ + +IGC                  V GN  WS+PT G+  Y+TWA+G+DF++GDT+
Sbjct: 1   MAARVEIIGCLIVVAVLLQGAAAADTHHVGGNISWSIPTEGESAYTTWASGEDFKLGDTI 60

Query: 51  VFNFPTGLHAVAEVTK 4
           VFN+ TG H VA V+K
Sbjct: 61  VFNW-TGTHTVARVSK 75


>emb|CBI36327.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/45 (57%), Positives = 36/45 (80%)
 Frame = -2

Query: 138 NSGWSLPTNGDGTYSTWAAGQDFRVGDTLVFNFPTGLHAVAEVTK 4
           N+GW++P  G  TY++WA+G+ F VGDTLVFNF T +H VAE++K
Sbjct: 32  NTGWTVPQGGAATYTSWASGKQFVVGDTLVFNFATNVHDVAELSK 76



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/45 (57%), Positives = 36/45 (80%)
 Frame = -2

Query: 138 NSGWSLPTNGDGTYSTWAAGQDFRVGDTLVFNFPTGLHAVAEVTK 4
           N+GW++P  G  TY++WA+G+ F VGDTLVFNF T +H VAE++K
Sbjct: 181 NTGWTVPQGGAATYTSWASGRQFVVGDTLVFNFATNVHDVAELSK 225



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
 Frame = -2

Query: 147 VLGNS-GWSLPTNGDGTYSTWAAGQDFRVGDTLVFNFPTGLHAVAEVTK 4
           V+G+S GW++P NG   Y++WA+ + F VGD LVFNF T  H V E++K
Sbjct: 388 VVGDSLGWTVPPNGAAAYTSWASNKQFMVGDILVFNFATNEHDVVELSK 436


>ref|XP_002266874.1| PREDICTED: cucumber peeling cupredoxin-like [Vitis vinifera]
          Length = 174

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/45 (57%), Positives = 36/45 (80%)
 Frame = -2

Query: 138 NSGWSLPTNGDGTYSTWAAGQDFRVGDTLVFNFPTGLHAVAEVTK 4
           N+GW++P  G  TY++WA+G+ F VGDTLVFNF T +H VAE++K
Sbjct: 32  NTGWTVPQGGAATYTSWASGKQFVVGDTLVFNFATNVHDVAELSK 76


>ref|XP_002265643.1| PREDICTED: blue copper protein-like [Vitis vinifera]
          Length = 212

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/45 (57%), Positives = 36/45 (80%)
 Frame = -2

Query: 138 NSGWSLPTNGDGTYSTWAAGQDFRVGDTLVFNFPTGLHAVAEVTK 4
           N+GW++P  G  TY++WA+G+ F VGDTLVFNF T +H VAE++K
Sbjct: 32  NTGWTVPQGGAATYTSWASGRQFVVGDTLVFNFATNVHDVAELSK 76


Top