BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027996
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat...    83   2e-14
emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]    83   2e-14
ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...    83   3e-14
ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14
emb|CBI34098.3| unnamed protein product [Vitis vinifera]               82   3e-14

>ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/99 (38%), Positives = 64/99 (64%)
 Frame = +2

Query: 2   TAKNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDI 181
           ++K L+P+ RTY  MING C+R ++ EA  LF+EM+  G +P+  TYN++ QGL+   + 
Sbjct: 480 SSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEA 539

Query: 182 PKAVRFLKEMVKKGFSVTAETMSKVTDLLVLAKGDPNYK 298
            +A++ L+EM+ +GFS    T + + ++L   K D + K
Sbjct: 540 LRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVK 578



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
 Frame = +2

Query: 11  NLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPKA 190
           N QPD   Y ++I+  CK R ++EA +LF +M  +GI+P+ FTY S+I  L    +    
Sbjct: 204 NCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHV 263

Query: 191 VRFLKEMVKKG-------FSVTAETMSK---------VTDLLVLAKGDPNYKCVDASQVL 322
              L +M+          FS   + + K         V D++++   +PN    +A  + 
Sbjct: 264 TTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA-LMD 322

Query: 323 AA*LRGKLVEAVELLEKIVDNGYPFN 400
              L+ ++ EAV++ + +V NGY  N
Sbjct: 323 GHCLQSEMDEAVKVFDTMVHNGYAPN 348


>emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/99 (38%), Positives = 64/99 (64%)
 Frame = +2

Query: 2   TAKNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDI 181
           ++K L+P+ RTY  MING C+R ++ EA  LF+EM+  G +P+  TYN++ QGL+   + 
Sbjct: 479 SSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEA 538

Query: 182 PKAVRFLKEMVKKGFSVTAETMSKVTDLLVLAKGDPNYK 298
            +A++ L+EM+ +GFS    T + + ++L   K D + K
Sbjct: 539 LRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVK 577



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
 Frame = +2

Query: 11  NLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPKA 190
           N QPD   Y ++I+  CK R ++EA +LF +M  +GI+P+ FTY S+I  L    +    
Sbjct: 202 NCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHV 261

Query: 191 VRFLKEMVKKG-------FSVTAETMSK---------VTDLLVLAKGDPNYKCVDASQVL 322
              L +M+          FS   + + K         V D++++   +PN    +A  + 
Sbjct: 262 TTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA-LMD 320

Query: 323 AA*LRGKLVEAVELLEKIVDNGYPFN 400
              L+ ++ EAV++ + +V NGY  N
Sbjct: 321 GHCLQSEMDEAVKVFDTMVHNGYAPN 346



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/68 (39%), Positives = 41/68 (60%)
 Frame = +2

Query: 20  PDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPKAVRF 199
           P+  +YNT+ING+CK + + +A  LF EM +K + PN  TYN+++ GL     +  A+  
Sbjct: 345 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIAL 404

Query: 200 LKEMVKKG 223
             EMV  G
Sbjct: 405 FHEMVAHG 412



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/66 (40%), Positives = 37/66 (56%)
 Frame = +2

Query: 14  LQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPKAV 193
           LQPDT T+ T+I G C    I +A  LF +M  +G  PN  TY ++I GL    +   A+
Sbjct: 133 LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAI 192

Query: 194 RFLKEM 211
           R L+ M
Sbjct: 193 RLLRSM 198


>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 35/89 (39%), Positives = 59/89 (66%)
 Frame = +2

Query: 2   TAKNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDI 181
           ++K L PD RTY  MING C++ +++EA  LF EM+E G +PN  TYN + +G +  N+ 
Sbjct: 466 SSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNET 525

Query: 182 PKAVRFLKEMVKKGFSVTAETMSKVTDLL 268
            +A++  +EM+ +GFS+   T + + ++L
Sbjct: 526 LRAIQLFQEMLSRGFSIDVSTTTLLVEML 554



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/87 (35%), Positives = 49/87 (56%)
 Frame = +2

Query: 8   KNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPK 187
           +N +P    Y+T+I+  CK R ++EA  LF +M  KGI+PN FTY+S+I GL +     +
Sbjct: 188 RNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKE 247

Query: 188 AVRFLKEMVKKGFSVTAETMSKVTDLL 268
           A+R    M+ +       T + + D L
Sbjct: 248 AIRLFYAMIHRKIMPDQLTFNTLVDAL 274



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/84 (35%), Positives = 43/84 (51%)
 Frame = +2

Query: 17  QPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPKAVR 196
           QP T T+ T+I G C    I EA  LF +M  +G  P+  TY ++I GL    +   A+R
Sbjct: 121 QPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIR 180

Query: 197 FLKEMVKKGFSVTAETMSKVTDLL 268
           FL+ M ++    T    S + D L
Sbjct: 181 FLRSMEQRNCRPTVVVYSTIIDSL 204



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/72 (37%), Positives = 42/72 (58%)
 Frame = +2

Query: 8   KNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPK 187
           K   P   +Y T+ING+CK +++ +A  LF EM ++G+ P+  TYN++I GL     +  
Sbjct: 328 KGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRD 387

Query: 188 AVRFLKEMVKKG 223
           A+    EMV  G
Sbjct: 388 AIALFHEMVVYG 399



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/83 (33%), Positives = 46/83 (55%)
 Frame = +2

Query: 11  NLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPKA 190
           NL PD   Y+ +++G C+   +  A+DLF ++  KG+ P+  TY  MI GL  +  + +A
Sbjct: 434 NLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEA 493

Query: 191 VRFLKEMVKKGFSVTAETMSKVT 259
            +   EM + G S  A T + +T
Sbjct: 494 SKLFGEMDENGCSPNACTYNLIT 516


>ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 35/76 (46%), Positives = 53/76 (69%)
 Frame = +2

Query: 8   KNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPK 187
           K L+PD+ TY+TMI+G+CK   ++EA  LF EM  KG+ P+ F YN+++ G   E D+ K
Sbjct: 623 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 682

Query: 188 AVRFLKEMVKKGFSVT 235
           A+   +EM++KGF+ T
Sbjct: 683 AMNLFREMLQKGFATT 698



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/85 (41%), Positives = 51/85 (60%)
 Frame = +2

Query: 8   KNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPK 187
           K L PD  TY+++I+GFCK+  + +A +L  EM  KGIAPN F YN+++ GL    DI +
Sbjct: 553 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 612

Query: 188 AVRFLKEMVKKGFSVTAETMSKVTD 262
           A +    M +KG    + T S + D
Sbjct: 613 ARKLFDGMPEKGLEPDSVTYSTMID 637



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/75 (36%), Positives = 43/75 (57%)
 Frame = +2

Query: 5   AKNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIP 184
           A  + PD +T +  I+G  K   + EA  +F E++EKG+ P+ FTY+S+I G   + ++ 
Sbjct: 517 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 576

Query: 185 KAVRFLKEMVKKGFS 229
           KA     EM  KG +
Sbjct: 577 KAFELHDEMCLKGIA 591


>emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 35/76 (46%), Positives = 53/76 (69%)
 Frame = +2

Query: 8   KNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPK 187
           K L+PD+ TY+TMI+G+CK   ++EA  LF EM  KG+ P+ F YN+++ G   E D+ K
Sbjct: 424 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 483

Query: 188 AVRFLKEMVKKGFSVT 235
           A+   +EM++KGF+ T
Sbjct: 484 AMNLFREMLQKGFATT 499



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/85 (41%), Positives = 51/85 (60%)
 Frame = +2

Query: 8   KNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPK 187
           K L PD  TY+++I+GFCK+  + +A +L  EM  KGIAPN F YN+++ GL    DI +
Sbjct: 354 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 413

Query: 188 AVRFLKEMVKKGFSVTAETMSKVTD 262
           A +    M +KG    + T S + D
Sbjct: 414 ARKLFDGMPEKGLEPDSVTYSTMID 438



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/75 (36%), Positives = 43/75 (57%)
 Frame = +2

Query: 5   AKNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIP 184
           A  + PD +T +  I+G  K   + EA  +F E++EKG+ P+ FTY+S+I G   + ++ 
Sbjct: 318 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 377

Query: 185 KAVRFLKEMVKKGFS 229
           KA     EM  KG +
Sbjct: 378 KAFELHDEMCLKGIA 392