BLASTX nr result
ID: Coptis21_contig00027996
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00027996 (405 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat... 83 2e-14 emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera] 83 2e-14 ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat... 83 3e-14 ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi... 82 3e-14 emb|CBI34098.3| unnamed protein product [Vitis vinifera] 82 3e-14 >ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Vitis vinifera] Length = 586 Score = 83.2 bits (204), Expect = 2e-14 Identities = 38/99 (38%), Positives = 64/99 (64%) Frame = +2 Query: 2 TAKNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDI 181 ++K L+P+ RTY MING C+R ++ EA LF+EM+ G +P+ TYN++ QGL+ + Sbjct: 480 SSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEA 539 Query: 182 PKAVRFLKEMVKKGFSVTAETMSKVTDLLVLAKGDPNYK 298 +A++ L+EM+ +GFS T + + ++L K D + K Sbjct: 540 LRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVK 578 Score = 62.0 bits (149), Expect = 5e-08 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 16/146 (10%) Frame = +2 Query: 11 NLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPKA 190 N QPD Y ++I+ CK R ++EA +LF +M +GI+P+ FTY S+I L + Sbjct: 204 NCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHV 263 Query: 191 VRFLKEMVKKG-------FSVTAETMSK---------VTDLLVLAKGDPNYKCVDASQVL 322 L +M+ FS + + K V D++++ +PN +A + Sbjct: 264 TTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA-LMD 322 Query: 323 AA*LRGKLVEAVELLEKIVDNGYPFN 400 L+ ++ EAV++ + +V NGY N Sbjct: 323 GHCLQSEMDEAVKVFDTMVHNGYAPN 348 >emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera] Length = 585 Score = 83.2 bits (204), Expect = 2e-14 Identities = 38/99 (38%), Positives = 64/99 (64%) Frame = +2 Query: 2 TAKNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDI 181 ++K L+P+ RTY MING C+R ++ EA LF+EM+ G +P+ TYN++ QGL+ + Sbjct: 479 SSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEA 538 Query: 182 PKAVRFLKEMVKKGFSVTAETMSKVTDLLVLAKGDPNYK 298 +A++ L+EM+ +GFS T + + ++L K D + K Sbjct: 539 LRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVK 577 Score = 62.0 bits (149), Expect = 5e-08 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 16/146 (10%) Frame = +2 Query: 11 NLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPKA 190 N QPD Y ++I+ CK R ++EA +LF +M +GI+P+ FTY S+I L + Sbjct: 202 NCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHV 261 Query: 191 VRFLKEMVKKG-------FSVTAETMSK---------VTDLLVLAKGDPNYKCVDASQVL 322 L +M+ FS + + K V D++++ +PN +A + Sbjct: 262 TTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA-LMD 320 Query: 323 AA*LRGKLVEAVELLEKIVDNGYPFN 400 L+ ++ EAV++ + +V NGY N Sbjct: 321 GHCLQSEMDEAVKVFDTMVHNGYAPN 346 Score = 57.0 bits (136), Expect = 2e-06 Identities = 27/68 (39%), Positives = 41/68 (60%) Frame = +2 Query: 20 PDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPKAVRF 199 P+ +YNT+ING+CK + + +A LF EM +K + PN TYN+++ GL + A+ Sbjct: 345 PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIAL 404 Query: 200 LKEMVKKG 223 EMV G Sbjct: 405 FHEMVAHG 412 Score = 54.7 bits (130), Expect = 8e-06 Identities = 27/66 (40%), Positives = 37/66 (56%) Frame = +2 Query: 14 LQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPKAV 193 LQPDT T+ T+I G C I +A LF +M +G PN TY ++I GL + A+ Sbjct: 133 LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAI 192 Query: 194 RFLKEM 211 R L+ M Sbjct: 193 RLLRSM 198 >ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial-like [Vitis vinifera] Length = 572 Score = 82.8 bits (203), Expect = 3e-14 Identities = 35/89 (39%), Positives = 59/89 (66%) Frame = +2 Query: 2 TAKNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDI 181 ++K L PD RTY MING C++ +++EA LF EM+E G +PN TYN + +G + N+ Sbjct: 466 SSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNET 525 Query: 182 PKAVRFLKEMVKKGFSVTAETMSKVTDLL 268 +A++ +EM+ +GFS+ T + + ++L Sbjct: 526 LRAIQLFQEMLSRGFSIDVSTTTLLVEML 554 Score = 63.9 bits (154), Expect = 1e-08 Identities = 31/87 (35%), Positives = 49/87 (56%) Frame = +2 Query: 8 KNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPK 187 +N +P Y+T+I+ CK R ++EA LF +M KGI+PN FTY+S+I GL + + Sbjct: 188 RNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKE 247 Query: 188 AVRFLKEMVKKGFSVTAETMSKVTDLL 268 A+R M+ + T + + D L Sbjct: 248 AIRLFYAMIHRKIMPDQLTFNTLVDAL 274 Score = 58.5 bits (140), Expect = 5e-07 Identities = 30/84 (35%), Positives = 43/84 (51%) Frame = +2 Query: 17 QPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPKAVR 196 QP T T+ T+I G C I EA LF +M +G P+ TY ++I GL + A+R Sbjct: 121 QPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIR 180 Query: 197 FLKEMVKKGFSVTAETMSKVTDLL 268 FL+ M ++ T S + D L Sbjct: 181 FLRSMEQRNCRPTVVVYSTIIDSL 204 Score = 58.2 bits (139), Expect = 7e-07 Identities = 27/72 (37%), Positives = 42/72 (58%) Frame = +2 Query: 8 KNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPK 187 K P +Y T+ING+CK +++ +A LF EM ++G+ P+ TYN++I GL + Sbjct: 328 KGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRD 387 Query: 188 AVRFLKEMVKKG 223 A+ EMV G Sbjct: 388 AIALFHEMVVYG 399 Score = 55.8 bits (133), Expect = 3e-06 Identities = 28/83 (33%), Positives = 46/83 (55%) Frame = +2 Query: 11 NLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPKA 190 NL PD Y+ +++G C+ + A+DLF ++ KG+ P+ TY MI GL + + +A Sbjct: 434 NLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEA 493 Query: 191 VRFLKEMVKKGFSVTAETMSKVT 259 + EM + G S A T + +T Sbjct: 494 SKLFGEMDENGCSPNACTYNLIT 516 >ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990, mitochondrial-like [Vitis vinifera] Length = 935 Score = 82.4 bits (202), Expect = 3e-14 Identities = 35/76 (46%), Positives = 53/76 (69%) Frame = +2 Query: 8 KNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPK 187 K L+PD+ TY+TMI+G+CK ++EA LF EM KG+ P+ F YN+++ G E D+ K Sbjct: 623 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 682 Query: 188 AVRFLKEMVKKGFSVT 235 A+ +EM++KGF+ T Sbjct: 683 AMNLFREMLQKGFATT 698 Score = 68.6 bits (166), Expect = 5e-10 Identities = 35/85 (41%), Positives = 51/85 (60%) Frame = +2 Query: 8 KNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPK 187 K L PD TY+++I+GFCK+ + +A +L EM KGIAPN F YN+++ GL DI + Sbjct: 553 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 612 Query: 188 AVRFLKEMVKKGFSVTAETMSKVTD 262 A + M +KG + T S + D Sbjct: 613 ARKLFDGMPEKGLEPDSVTYSTMID 637 Score = 57.8 bits (138), Expect = 9e-07 Identities = 27/75 (36%), Positives = 43/75 (57%) Frame = +2 Query: 5 AKNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIP 184 A + PD +T + I+G K + EA +F E++EKG+ P+ FTY+S+I G + ++ Sbjct: 517 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 576 Query: 185 KAVRFLKEMVKKGFS 229 KA EM KG + Sbjct: 577 KAFELHDEMCLKGIA 591 >emb|CBI34098.3| unnamed protein product [Vitis vinifera] Length = 718 Score = 82.4 bits (202), Expect = 3e-14 Identities = 35/76 (46%), Positives = 53/76 (69%) Frame = +2 Query: 8 KNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPK 187 K L+PD+ TY+TMI+G+CK ++EA LF EM KG+ P+ F YN+++ G E D+ K Sbjct: 424 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 483 Query: 188 AVRFLKEMVKKGFSVT 235 A+ +EM++KGF+ T Sbjct: 484 AMNLFREMLQKGFATT 499 Score = 68.6 bits (166), Expect = 5e-10 Identities = 35/85 (41%), Positives = 51/85 (60%) Frame = +2 Query: 8 KNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIPK 187 K L PD TY+++I+GFCK+ + +A +L EM KGIAPN F YN+++ GL DI + Sbjct: 354 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 413 Query: 188 AVRFLKEMVKKGFSVTAETMSKVTD 262 A + M +KG + T S + D Sbjct: 414 ARKLFDGMPEKGLEPDSVTYSTMID 438 Score = 57.8 bits (138), Expect = 9e-07 Identities = 27/75 (36%), Positives = 43/75 (57%) Frame = +2 Query: 5 AKNLQPDTRTYNTMINGFCKRRMISEAQDLFVEMEEKGIAPNEFTYNSMIQGLIVENDIP 184 A + PD +T + I+G K + EA +F E++EKG+ P+ FTY+S+I G + ++ Sbjct: 318 ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 377 Query: 185 KAVRFLKEMVKKGFS 229 KA EM KG + Sbjct: 378 KAFELHDEMCLKGIA 392