BLASTX nr result

ID: Coptis21_contig00027978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027978
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526985.1| Nuclease S1 precursor, putative [Ricinus com...   103   1e-20
ref|XP_002315936.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_002282886.1| PREDICTED: nuclease S1 isoform 2 [Vitis vini...    96   3e-18
ref|XP_002282829.1| PREDICTED: nuclease S1 isoform 1 [Vitis vini...    96   3e-18
ref|XP_002455258.1| hypothetical protein SORBIDRAFT_03g007340 [S...    92   4e-17

>ref|XP_002526985.1| Nuclease S1 precursor, putative [Ricinus communis]
           gi|223533620|gb|EEF35357.1| Nuclease S1 precursor,
           putative [Ricinus communis]
          Length = 291

 Score =  103 bits (257), Expect = 1e-20
 Identities = 44/61 (72%), Positives = 51/61 (83%)
 Frame = -1

Query: 185 PIIHGWGEDGHLTVCRIAQPLLSDAAKAAVQDLLPAYADNDLGSVCSWADHMKFRYHWSS 6
           P+IH WG DGH   C+IAQ  LSDAA  AV++LLP YA+NDLGS+CSWADH+KFRYHWSS
Sbjct: 21  PVIHCWGTDGHFITCKIAQSRLSDAAADAVKELLPEYANNDLGSICSWADHVKFRYHWSS 80

Query: 5   A 3
           A
Sbjct: 81  A 81


>ref|XP_002315936.1| predicted protein [Populus trichocarpa] gi|222864976|gb|EEF02107.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 43/60 (71%), Positives = 51/60 (85%)
 Frame = -1

Query: 185 PIIHGWGEDGHLTVCRIAQPLLSDAAKAAVQDLLPAYADNDLGSVCSWADHMKFRYHWSS 6
           P+I+GWG DGHLTVCRIAQ  LS+AA  AV+ LLP YA +DLGSVCSWAD ++FRYHWS+
Sbjct: 19  PVINGWGIDGHLTVCRIAQSRLSEAAADAVKQLLPEYAGSDLGSVCSWADEVRFRYHWSA 78


>ref|XP_002282886.1| PREDICTED: nuclease S1 isoform 2 [Vitis vinifera]
          Length = 293

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 41/59 (69%), Positives = 48/59 (81%)
 Frame = -1

Query: 182 IIHGWGEDGHLTVCRIAQPLLSDAAKAAVQDLLPAYADNDLGSVCSWADHMKFRYHWSS 6
           + HGWG DGH T+CRIAQ  LSD A  AV++LLPA AD+DL S+CSWAD +KFRYHWSS
Sbjct: 20  VSHGWGTDGHFTICRIAQSRLSDVAADAVKELLPASADDDLASLCSWADRVKFRYHWSS 78


>ref|XP_002282829.1| PREDICTED: nuclease S1 isoform 1 [Vitis vinifera]
           gi|297737807|emb|CBI27008.3| unnamed protein product
           [Vitis vinifera]
          Length = 285

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 41/59 (69%), Positives = 48/59 (81%)
 Frame = -1

Query: 182 IIHGWGEDGHLTVCRIAQPLLSDAAKAAVQDLLPAYADNDLGSVCSWADHMKFRYHWSS 6
           + HGWG DGH T+CRIAQ  LSD A  AV++LLPA AD+DL S+CSWAD +KFRYHWSS
Sbjct: 20  VSHGWGTDGHFTICRIAQSRLSDVAADAVKELLPASADDDLASLCSWADRVKFRYHWSS 78


>ref|XP_002455258.1| hypothetical protein SORBIDRAFT_03g007340 [Sorghum bicolor]
           gi|241927233|gb|EES00378.1| hypothetical protein
           SORBIDRAFT_03g007340 [Sorghum bicolor]
          Length = 288

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/57 (71%), Positives = 47/57 (82%)
 Frame = -1

Query: 176 HGWGEDGHLTVCRIAQPLLSDAAKAAVQDLLPAYADNDLGSVCSWADHMKFRYHWSS 6
           H WG DGHLTVC+IAQ  LSDAA AAV+DLLP+YA N+L S+CSWAD +K RY WSS
Sbjct: 23  HAWGVDGHLTVCQIAQGRLSDAAAAAVKDLLPSYAGNNLSSLCSWADDVKLRYRWSS 79


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