BLASTX nr result
ID: Coptis21_contig00027978
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00027978 (338 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002526985.1| Nuclease S1 precursor, putative [Ricinus com... 103 1e-20 ref|XP_002315936.1| predicted protein [Populus trichocarpa] gi|2... 99 5e-19 ref|XP_002282886.1| PREDICTED: nuclease S1 isoform 2 [Vitis vini... 96 3e-18 ref|XP_002282829.1| PREDICTED: nuclease S1 isoform 1 [Vitis vini... 96 3e-18 ref|XP_002455258.1| hypothetical protein SORBIDRAFT_03g007340 [S... 92 4e-17 >ref|XP_002526985.1| Nuclease S1 precursor, putative [Ricinus communis] gi|223533620|gb|EEF35357.1| Nuclease S1 precursor, putative [Ricinus communis] Length = 291 Score = 103 bits (257), Expect = 1e-20 Identities = 44/61 (72%), Positives = 51/61 (83%) Frame = -1 Query: 185 PIIHGWGEDGHLTVCRIAQPLLSDAAKAAVQDLLPAYADNDLGSVCSWADHMKFRYHWSS 6 P+IH WG DGH C+IAQ LSDAA AV++LLP YA+NDLGS+CSWADH+KFRYHWSS Sbjct: 21 PVIHCWGTDGHFITCKIAQSRLSDAAADAVKELLPEYANNDLGSICSWADHVKFRYHWSS 80 Query: 5 A 3 A Sbjct: 81 A 81 >ref|XP_002315936.1| predicted protein [Populus trichocarpa] gi|222864976|gb|EEF02107.1| predicted protein [Populus trichocarpa] Length = 290 Score = 98.6 bits (244), Expect = 5e-19 Identities = 43/60 (71%), Positives = 51/60 (85%) Frame = -1 Query: 185 PIIHGWGEDGHLTVCRIAQPLLSDAAKAAVQDLLPAYADNDLGSVCSWADHMKFRYHWSS 6 P+I+GWG DGHLTVCRIAQ LS+AA AV+ LLP YA +DLGSVCSWAD ++FRYHWS+ Sbjct: 19 PVINGWGIDGHLTVCRIAQSRLSEAAADAVKQLLPEYAGSDLGSVCSWADEVRFRYHWSA 78 >ref|XP_002282886.1| PREDICTED: nuclease S1 isoform 2 [Vitis vinifera] Length = 293 Score = 95.9 bits (237), Expect = 3e-18 Identities = 41/59 (69%), Positives = 48/59 (81%) Frame = -1 Query: 182 IIHGWGEDGHLTVCRIAQPLLSDAAKAAVQDLLPAYADNDLGSVCSWADHMKFRYHWSS 6 + HGWG DGH T+CRIAQ LSD A AV++LLPA AD+DL S+CSWAD +KFRYHWSS Sbjct: 20 VSHGWGTDGHFTICRIAQSRLSDVAADAVKELLPASADDDLASLCSWADRVKFRYHWSS 78 >ref|XP_002282829.1| PREDICTED: nuclease S1 isoform 1 [Vitis vinifera] gi|297737807|emb|CBI27008.3| unnamed protein product [Vitis vinifera] Length = 285 Score = 95.9 bits (237), Expect = 3e-18 Identities = 41/59 (69%), Positives = 48/59 (81%) Frame = -1 Query: 182 IIHGWGEDGHLTVCRIAQPLLSDAAKAAVQDLLPAYADNDLGSVCSWADHMKFRYHWSS 6 + HGWG DGH T+CRIAQ LSD A AV++LLPA AD+DL S+CSWAD +KFRYHWSS Sbjct: 20 VSHGWGTDGHFTICRIAQSRLSDVAADAVKELLPASADDDLASLCSWADRVKFRYHWSS 78 >ref|XP_002455258.1| hypothetical protein SORBIDRAFT_03g007340 [Sorghum bicolor] gi|241927233|gb|EES00378.1| hypothetical protein SORBIDRAFT_03g007340 [Sorghum bicolor] Length = 288 Score = 92.0 bits (227), Expect = 4e-17 Identities = 41/57 (71%), Positives = 47/57 (82%) Frame = -1 Query: 176 HGWGEDGHLTVCRIAQPLLSDAAKAAVQDLLPAYADNDLGSVCSWADHMKFRYHWSS 6 H WG DGHLTVC+IAQ LSDAA AAV+DLLP+YA N+L S+CSWAD +K RY WSS Sbjct: 23 HAWGVDGHLTVCQIAQGRLSDAAAAAVKDLLPSYAGNNLSSLCSWADDVKLRYRWSS 79