BLASTX nr result

ID: Coptis21_contig00027968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027968
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531010.1| DUF26 domain-containing protein 1 precursor,...    58   9e-07
emb|CBI33463.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002263857.1| PREDICTED: cysteine-rich repeat secretory pr...    56   3e-06
emb|CAN72513.1| hypothetical protein VITISV_021208 [Vitis vinifera]    56   3e-06
ref|XP_002305881.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002531010.1| DUF26 domain-containing protein 1 precursor, putative [Ricinus
           communis] gi|223529408|gb|EEF31370.1| DUF26
           domain-containing protein 1 precursor, putative [Ricinus
           communis]
          Length = 282

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/42 (64%), Positives = 35/42 (83%)
 Frame = -2

Query: 450 SKTNRGSSSNDGEKAFAITIGLLAGVALMIVFLSFIRKVLSG 325
           +K++   S+N+GEK FAI IGLLAGVAL+I+FL+FIRKV  G
Sbjct: 238 TKSHNDKSTNEGEKTFAIIIGLLAGVALIIIFLTFIRKVFEG 279


>emb|CBI33463.3| unnamed protein product [Vitis vinifera]
          Length = 202

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = -2

Query: 441 NRGSSSNDGEKAFAITIGLLAGVALMIVFLSFIRKVLSG 325
           N  SS +DGEK FAI +GLLAGVAL+I+FL+F+RKV  G
Sbjct: 161 NHDSSHDDGEKTFAIIVGLLAGVALIIIFLTFMRKVFEG 199


>ref|XP_002263857.1| PREDICTED: cysteine-rich repeat secretory protein 60-like [Vitis
           vinifera]
          Length = 283

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = -2

Query: 441 NRGSSSNDGEKAFAITIGLLAGVALMIVFLSFIRKVLSG 325
           N  SS +DGEK FAI +GLLAGVAL+I+FL+F+RKV  G
Sbjct: 242 NHDSSHDDGEKTFAIIVGLLAGVALIIIFLTFMRKVFEG 280


>emb|CAN72513.1| hypothetical protein VITISV_021208 [Vitis vinifera]
          Length = 314

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = -2

Query: 441 NRGSSSNDGEKAFAITIGLLAGVALMIVFLSFIRKVLSG 325
           N  SS +DGEK FAI +GLLAGVAL+I+FL+F+RKV  G
Sbjct: 242 NHDSSHDDGEKTFAIIVGLLAGVALIIIFLTFMRKVFEG 280


>ref|XP_002305881.1| predicted protein [Populus trichocarpa] gi|222848845|gb|EEE86392.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = -2

Query: 429 SSNDGEKAFAITIGLLAGVALMIVFLSFIRKVLSG 325
           S++DGEK FAI IGLLAGVAL+I+FLSF+RKV  G
Sbjct: 252 STSDGEKTFAIIIGLLAGVALLIIFLSFLRKVFGG 286


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