BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027961
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525184.1| pentatricopeptide repeat-containing protein,...   139   2e-31
ref|XP_002322855.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
emb|CBI32614.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|NP_187576.1| pentatricopeptide repeat-containing protein [Ar...   134   8e-30

>ref|XP_002525184.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535481|gb|EEF37150.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 740

 Score =  139 bits (350), Expect = 2e-31
 Identities = 74/110 (67%), Positives = 86/110 (78%)
 Frame = -1

Query: 332 PSLTSLATTNNDQLLLSLLKQRKTEDAWQLYSQSSTHYLPNPTCLSRLVCQLSYHNTKES 153
           P L+    TNNDQ LLSLL+QR+T+ AW  YSQS    LPNPTCLSRLV QLSY NT  S
Sbjct: 50  PDLSLTTATNNDQTLLSLLRQRETDKAWIFYSQSPL--LPNPTCLSRLVSQLSYQNTPLS 107

Query: 152 LTRAQTIIRRLREEGQLHRLDANSLGLLAMSAAKAGSVLYASSIIKSMLR 3
           L+RAQ+I+ RLR+E QLHRLDANSLGLLA+SA K+G + YA S+I SMLR
Sbjct: 108 LSRAQSILTRLRQERQLHRLDANSLGLLAVSATKSGQLSYAVSLINSMLR 157


>ref|XP_002322855.1| predicted protein [Populus trichocarpa] gi|222867485|gb|EEF04616.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  137 bits (346), Expect = 7e-31
 Identities = 73/107 (68%), Positives = 87/107 (81%)
 Frame = -1

Query: 323 TSLATTNNDQLLLSLLKQRKTEDAWQLYSQSSTHYLPNPTCLSRLVCQLSYHNTKESLTR 144
           TS+ +++NDQ LLSLL+QRKTE+AW LY+Q  T +LP PTCLSRLV QLSY NT  SL R
Sbjct: 68  TSITSSSNDQTLLSLLRQRKTEEAWVLYTQ--TPHLPPPTCLSRLVSQLSYQNTPLSLRR 125

Query: 143 AQTIIRRLREEGQLHRLDANSLGLLAMSAAKAGSVLYASSIIKSMLR 3
           AQ+I+ RLR E QLHRLDANSLGLLA+SA K+G + YA S+I SMLR
Sbjct: 126 AQSILTRLRHECQLHRLDANSLGLLAVSATKSGQLSYAFSLINSMLR 172


>emb|CBI32614.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  136 bits (343), Expect = 2e-30
 Identities = 75/110 (68%), Positives = 90/110 (81%), Gaps = 3/110 (2%)
 Frame = -1

Query: 323 TSLATTNN---DQLLLSLLKQRKTEDAWQLYSQSSTHYLPNPTCLSRLVCQLSYHNTKES 153
           T+ ATT +   +Q LL+LL+QRKTE+AW  Y Q +   LP+PTCLSRLV QLSY NT ++
Sbjct: 78  TTTATTPHHSLNQTLLTLLRQRKTEEAWLTYVQCTQ--LPSPTCLSRLVSQLSYQNTHQA 135

Query: 152 LTRAQTIIRRLREEGQLHRLDANSLGLLAMSAAKAGSVLYASSIIKSMLR 3
           LTRAQ+II+RLR E QLHRLDANSLGLLA+SAAKAG  LYA+S+IKSMLR
Sbjct: 136 LTRAQSIIQRLRNERQLHRLDANSLGLLAVSAAKAGHTLYAASLIKSMLR 185


>ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
           chloroplastic-like [Vitis vinifera]
          Length = 749

 Score =  136 bits (343), Expect = 2e-30
 Identities = 75/110 (68%), Positives = 90/110 (81%), Gaps = 3/110 (2%)
 Frame = -1

Query: 323 TSLATTNN---DQLLLSLLKQRKTEDAWQLYSQSSTHYLPNPTCLSRLVCQLSYHNTKES 153
           T+ ATT +   +Q LL+LL+QRKTE+AW  Y Q +   LP+PTCLSRLV QLSY NT ++
Sbjct: 70  TTTATTPHHSLNQTLLTLLRQRKTEEAWLTYVQCTQ--LPSPTCLSRLVSQLSYQNTHQA 127

Query: 152 LTRAQTIIRRLREEGQLHRLDANSLGLLAMSAAKAGSVLYASSIIKSMLR 3
           LTRAQ+II+RLR E QLHRLDANSLGLLA+SAAKAG  LYA+S+IKSMLR
Sbjct: 128 LTRAQSIIQRLRNERQLHRLDANSLGLLAVSAAKAGHTLYAASLIKSMLR 177


>ref|NP_187576.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g09650, chloroplastic; AltName: Full=Protein HIGH
           CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
           gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical
           protein [Arabidopsis thaliana]
           gi|332641272|gb|AEE74793.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 778

 Score =  134 bits (337), Expect = 8e-30
 Identities = 70/103 (67%), Positives = 84/103 (81%)
 Frame = -1

Query: 311 TTNNDQLLLSLLKQRKTEDAWQLYSQSSTHYLPNPTCLSRLVCQLSYHNTKESLTRAQTI 132
           +T+NDQ LL LL+ RKT++AW  Y QS+  +LP PTCLSRLV QLSY +  ESLTRAQ+I
Sbjct: 81  STHNDQELLFLLRNRKTDEAWAKYVQST--HLPGPTCLSRLVSQLSYQSKPESLTRAQSI 138

Query: 131 IRRLREEGQLHRLDANSLGLLAMSAAKAGSVLYASSIIKSMLR 3
           + RLR E QLHRLDANSLGLLAM+AAK+G  LYA S+IKSM+R
Sbjct: 139 LTRLRNERQLHRLDANSLGLLAMAAAKSGQTLYAVSVIKSMIR 181