BLASTX nr result

ID: Coptis21_contig00027960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027960
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622403.1| AAA-ATPase 1-like protein [Medicago truncatu...    67   2e-09
ref|XP_003525061.1| PREDICTED: uncharacterized protein LOC100798...    66   3e-09
ref|XP_002511494.1| ATP binding protein, putative [Ricinus commu...    64   2e-08
ref|XP_002267418.2| PREDICTED: mitochondrial chaperone BCS1 isof...    61   1e-07
emb|CAN77016.1| hypothetical protein VITISV_010516 [Vitis vinifera]    60   1e-07

>ref|XP_003622403.1| AAA-ATPase 1-like protein [Medicago truncatula]
           gi|355497418|gb|AES78621.1| AAA-ATPase 1-like protein
           [Medicago truncatula]
          Length = 520

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = -3

Query: 128 EMWASLGTTLASFMFMWAMIRQYLPYDLHRYIEKYAHRLFSF 3
           EMW ++G+TLASFMF+WA+IRQY PY L R+ EKY+HR+  +
Sbjct: 8   EMWTTMGSTLASFMFIWAIIRQYCPYQLLRFFEKYSHRIMDY 49


>ref|XP_003525061.1| PREDICTED: uncharacterized protein LOC100798176 [Glycine max]
          Length = 507

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = -3

Query: 134 LGEMWASLGTTLASFMFMWAMIRQYLPYDLHRYIEKYAHRLFSF 3
           + EMW ++G+TLASFMF+W ++RQY PY + R+ EKY HR+ S+
Sbjct: 3   ISEMWTTMGSTLASFMFLWTIMRQYCPYGVQRFFEKYTHRIMSY 46


>ref|XP_002511494.1| ATP binding protein, putative [Ricinus communis]
           gi|223550609|gb|EEF52096.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 505

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 24/42 (57%), Positives = 34/42 (80%)
 Frame = -3

Query: 128 EMWASLGTTLASFMFMWAMIRQYLPYDLHRYIEKYAHRLFSF 3
           EMWA++G+T+ASFMF+WA+ RQY PY++ RY EKY   + +F
Sbjct: 3   EMWATMGSTIASFMFIWAIFRQYCPYEVRRYFEKYTQGIMTF 44


>ref|XP_002267418.2| PREDICTED: mitochondrial chaperone BCS1 isoform 1 [Vitis vinifera]
          Length = 474

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -3

Query: 134 LGEMWASLGTTLASFMFMWAMIRQYLPYDLHRYIEKYAHRLFSF 3
           +GEM   LG+ +A+ MF+WAM +QY P+DL R+ EKY+HRL  F
Sbjct: 1   MGEMLGDLGSVMAALMFIWAMFQQYFPHDLRRHFEKYSHRLMKF 44


>emb|CAN77016.1| hypothetical protein VITISV_010516 [Vitis vinifera]
          Length = 474

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 24/41 (58%), Positives = 34/41 (82%)
 Frame = -3

Query: 134 LGEMWASLGTTLASFMFMWAMIRQYLPYDLHRYIEKYAHRL 12
           +GEM  +LG+ +A+ MF+WAM +QY P+DL R+IEKY+HRL
Sbjct: 1   MGEMLGNLGSVMAALMFIWAMFQQYFPHDLRRHIEKYSHRL 41


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