BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027948
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002442909.1| hypothetical protein SORBIDRAFT_08g004750 [S...    73   5e-11
dbj|BAK00150.1| predicted protein [Hordeum vulgare subsp. vulgare]     71   2e-10
ref|XP_002325232.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-10
ref|XP_003573922.1| PREDICTED: F-box protein At5g07610-like [Bra...    70   3e-10
ref|XP_002461574.1| hypothetical protein SORBIDRAFT_02g004950 [S...    70   3e-10

>ref|XP_002442909.1| hypothetical protein SORBIDRAFT_08g004750 [Sorghum bicolor]
           gi|241943602|gb|EES16747.1| hypothetical protein
           SORBIDRAFT_08g004750 [Sorghum bicolor]
          Length = 311

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
 Frame = -3

Query: 429 LLCNELVTEILIRLPPKSIYKSKCICKRWRLLITKPTFIKRLKSLTPLTTGFFYNHLEES 250
           +L +EL+ EIL RLP KS+ + KC+ + WR LI+ P   +R        +G F+     S
Sbjct: 15  VLPDELIVEILARLPAKSLCRFKCVSRAWRSLISDPANRRR---FAHTLSGLFFPRPYGS 71

Query: 249 KAKYLASNSNVSSVN-----ID--LSFIKRP--NAYVMASHNGLLL--CSRRINKDKYSP 103
           +  +     ++SSV+     +D  LSF+        ++ S NGLLL  C+  I++    P
Sbjct: 72  RPAWDFIGLSMSSVSPPPPGVDTALSFLPPTCGEMELLDSCNGLLLLCCTGNIHESPSPP 131

Query: 102 PAYFVCNPLTKQCFTLPMDRRMPGFMG 22
           P Y VCNP T +  TLP    +PG +G
Sbjct: 132 PFYVVCNPATGEWVTLPQPSHVPGLVG 158


>dbj|BAK00150.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 405

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
 Frame = -3

Query: 426 LCNELVTEILIRLPPKSIYKSKCICKRWRLLITKPTFIKRLKSLTPLTTGFF--YNHLEE 253
           L ++LV EIL RLP KS  + KC+CK W    + P +    ++L  + TG F  Y  L +
Sbjct: 9   LPDDLVVEILSRLPFKSFCRFKCVCKTWLAFSSNPNY---HENLPKIPTGLFCQYQDLNK 65

Query: 252 SKAKYLASNSNVSSVNIDLSFIKR-PNAYVMASHNGLLLCSRRIN--KDKYSPPAYFVCN 82
              K +    NV  ++  LSF+ + P   +M S NGL+LC RR     ++     + VCN
Sbjct: 66  KATKLIGQPRNVEQIDGALSFLPQYPQLKLMDSCNGLVLCMRRSMDWSNRTIIYHFIVCN 125

Query: 81  PLTKQCFTLPMDR 43
           P T++   LP  R
Sbjct: 126 PATREWTKLPDTR 138


>ref|XP_002325232.1| predicted protein [Populus trichocarpa] gi|222866666|gb|EEF03797.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
 Frame = -3

Query: 456 VCVSMGNMELLCNELVTEILIRLPPKSIYKSKCICKRWRLLITKPTFIKRLKSLTPLT-T 280
           V V +GN     ++ V EIL+ LP K++ K K I KRW  +I+ P+F  R   L P T +
Sbjct: 24  VDVVLGN-----DDFVGEILLHLPVKTVLKLKLISKRWLSIISHPSFAIRHTYLNPHTIS 78

Query: 279 GFFYN---HLEESKAKYLASNSNVSSVNIDLSFI-----KRPNAYVMASHNGLLLCSRRI 124
           G   N   H ++  +    S    S VN+   F+     K  + YV  S NGLLLCS+R+
Sbjct: 79  GLLLNVAYHFKKPSSYLYVSIDGKSVVNVSSDFLRFDPDKPGSTYVSQSCNGLLLCSKRM 138

Query: 123 --NKDKYSPPAYFVCNPLTKQC--FTLP 52
             +  +  P  Y+V NP T+Q    TLP
Sbjct: 139 RYSAARTKPTYYYVFNPTTRQFVELTLP 166


>ref|XP_003573922.1| PREDICTED: F-box protein At5g07610-like [Brachypodium distachyon]
          Length = 406

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 47/139 (33%), Positives = 79/139 (56%), Gaps = 11/139 (7%)
 Frame = -3

Query: 435 MELLCNELVTEILIRLPPKSIYKSKCICKRWRLLITKPTFIKRLKSLTPLTTGFFY--NH 262
           + LL ++L+ EIL R+P KS+++ KC+ + WR LI  P + K+L        GFFY  ++
Sbjct: 14  VSLLTDDLIMEILCRVPVKSLHRFKCVSRSWRDLIAHPAYRKKLPQ---TLAGFFYEISY 70

Query: 261 LEESKAKYLAS-NSNVSSVNID--LSFIKRPNAY----VMASHNGLLLCS--RRINKDKY 109
               +  Y AS + + ++V++D  L+F+ +P AY    ++ + NGLLLC+   + N    
Sbjct: 71  YGGVRRNYFASISGSAATVDVDPSLAFL-QPMAYTDIKLVDTRNGLLLCACYNKENSSTE 129

Query: 108 SPPAYFVCNPLTKQCFTLP 52
               + VCNP T++   LP
Sbjct: 130 HKLRFVVCNPATQRSVMLP 148


>ref|XP_002461574.1| hypothetical protein SORBIDRAFT_02g004950 [Sorghum bicolor]
           gi|241924951|gb|EER98095.1| hypothetical protein
           SORBIDRAFT_02g004950 [Sorghum bicolor]
          Length = 331

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
 Frame = -3

Query: 426 LCNELVTEILIRLPPKSIYKSKCICKRWRLLITKPTFIKRLKSLTPLTTGFFYNHLEESK 247
           L +EL+ EIL R+P +S+++ KC+ KRWR LI  P   KRL        GFF +    S 
Sbjct: 16  LPDELILEILCRVPARSMHRFKCVSKRWRDLIADPLNQKRLPQ---TLQGFFCSDGARSY 72

Query: 246 AKYLASNSNVSSVNIDLSF---IKRP---NAYVMASHNGLLLCSRRINKDKYSPPAYFVC 85
            ++++     + + +DLSF    K+P   N  ++ S NGL+L   R      S P+Y VC
Sbjct: 73  GRFISLPGRPAPL-VDLSFSFLTKQPEMSNIKLLGSCNGLVLFEHR--SGSASTPSYAVC 129

Query: 84  NPLTKQCFTLP 52
           NP T+Q   +P
Sbjct: 130 NPATEQWVAVP 140