BLASTX nr result

ID: Coptis21_contig00027932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027932
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327175.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_002510168.1| conserved hypothetical protein [Ricinus comm...   164   1e-38
ref|XP_002282986.1| PREDICTED: uncharacterized protein LOC100267...   163   3e-38
emb|CAN61027.1| hypothetical protein VITISV_001147 [Vitis vinifera]   163   3e-38
ref|XP_004141390.1| PREDICTED: transcription factor LHW-like [Cu...   154   9e-36

>ref|XP_002327175.1| predicted protein [Populus trichocarpa] gi|222835490|gb|EEE73925.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  164 bits (416), Expect = 9e-39
 Identities = 74/100 (74%), Positives = 86/100 (86%)
 Frame = +1

Query: 193 RWDNNGGSVLDHSKTNKRNWILVWEDGFCDFCECERAGSGYIKGKFGAEVFFKMSHEVYY 372
           +WD  GG+ LD SK NKRNWILVWEDGFCD  ECERAG+GY+KG+FG +VFFKMSHEVY 
Sbjct: 38  KWDY-GGTALDRSKGNKRNWILVWEDGFCDVYECERAGTGYMKGRFGTDVFFKMSHEVYN 96

Query: 373 FGEGLVGKVAAENSHKWVSKENSSENDPSQFSSWNGSIDP 492
           +GEGLVGKVAA+NSHKWV KEN +E+DP+  SSWN SI+P
Sbjct: 97  YGEGLVGKVAADNSHKWVFKENPNESDPNLISSWNMSIEP 136


>ref|XP_002510168.1| conserved hypothetical protein [Ricinus communis]
           gi|223550869|gb|EEF52355.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 369

 Score =  164 bits (415), Expect = 1e-38
 Identities = 75/100 (75%), Positives = 85/100 (85%)
 Frame = +1

Query: 193 RWDNNGGSVLDHSKTNKRNWILVWEDGFCDFCECERAGSGYIKGKFGAEVFFKMSHEVYY 372
           +WD  GG+ LD SK NKRNWILVWEDGFCD  ECE+AGSGY+KG+FG+ VFFKMSHEVY 
Sbjct: 48  KWDY-GGTALDRSKGNKRNWILVWEDGFCDLFECEKAGSGYMKGRFGSYVFFKMSHEVYN 106

Query: 373 FGEGLVGKVAAENSHKWVSKENSSENDPSQFSSWNGSIDP 492
           +GEGLVGKVAA+NSHKWV K+ SSENDP   SSWN SI+P
Sbjct: 107 YGEGLVGKVAADNSHKWVLKKTSSENDPDFISSWNMSIEP 146


>ref|XP_002282986.1| PREDICTED: uncharacterized protein LOC100267842 [Vitis vinifera]
           gi|302142275|emb|CBI19478.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  163 bits (412), Expect = 3e-38
 Identities = 74/100 (74%), Positives = 84/100 (84%)
 Frame = +1

Query: 193 RWDNNGGSVLDHSKTNKRNWILVWEDGFCDFCECERAGSGYIKGKFGAEVFFKMSHEVYY 372
           +WD  GG+ LD  K NKRNWILVWEDGFCDF ECERAG  Y+KG+FGA+VFFKMSHEVY 
Sbjct: 48  KWDYGGGA-LDRCKGNKRNWILVWEDGFCDFYECERAGGEYMKGRFGADVFFKMSHEVYN 106

Query: 373 FGEGLVGKVAAENSHKWVSKENSSENDPSQFSSWNGSIDP 492
           +GEGLVGKVAA+NSHKWV +E+ +ENDP   SSWN SIDP
Sbjct: 107 YGEGLVGKVAADNSHKWVFRESPNENDPGFISSWNVSIDP 146


>emb|CAN61027.1| hypothetical protein VITISV_001147 [Vitis vinifera]
          Length = 387

 Score =  163 bits (412), Expect = 3e-38
 Identities = 74/100 (74%), Positives = 84/100 (84%)
 Frame = +1

Query: 193 RWDNNGGSVLDHSKTNKRNWILVWEDGFCDFCECERAGSGYIKGKFGAEVFFKMSHEVYY 372
           +WD  GG+ LD  K NKRNWILVWEDGFCDF ECERAG  Y+KG+FGA+VFFKMSHEVY 
Sbjct: 55  KWDYGGGA-LDRCKGNKRNWILVWEDGFCDFYECERAGGEYMKGRFGADVFFKMSHEVYN 113

Query: 373 FGEGLVGKVAAENSHKWVSKENSSENDPSQFSSWNGSIDP 492
           +GEGLVGKVAA+NSHKWV +E+ +ENDP   SSWN SIDP
Sbjct: 114 YGEGLVGKVAADNSHKWVFRESPNENDPGFISSWNVSIDP 153


>ref|XP_004141390.1| PREDICTED: transcription factor LHW-like [Cucumis sativus]
           gi|449515101|ref|XP_004164588.1| PREDICTED:
           transcription factor LHW-like [Cucumis sativus]
          Length = 375

 Score =  154 bits (390), Expect = 9e-36
 Identities = 67/95 (70%), Positives = 80/95 (84%)
 Frame = +1

Query: 208 GGSVLDHSKTNKRNWILVWEDGFCDFCECERAGSGYIKGKFGAEVFFKMSHEVYYFGEGL 387
           GGS LD SK NKRNWILVWEDGFCDF EC+RA  G I G+FG ++FFKMSHEVY +GEGL
Sbjct: 54  GGSALDRSKGNKRNWILVWEDGFCDFHECQRAAGGCITGRFGVDLFFKMSHEVYSYGEGL 113

Query: 388 VGKVAAENSHKWVSKENSSENDPSQFSSWNGSIDP 492
           VGKV A+NSHKWV ++N++E+DP+  SSWN SI+P
Sbjct: 114 VGKVGADNSHKWVFRDNTTESDPNLISSWNSSIEP 148


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