BLASTX nr result

ID: Coptis21_contig00027920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027920
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513515.1| conserved hypothetical protein [Ricinus comm...   185   4e-45
ref|XP_002299927.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
gb|AFW77857.1| hypothetical protein ZEAMMB73_229307 [Zea mays]        181   5e-44
ref|XP_003534389.1| PREDICTED: uncharacterized protein LOC100808...   181   5e-44
ref|XP_003539855.1| PREDICTED: uncharacterized protein LOC100818...   181   5e-44

>ref|XP_002513515.1| conserved hypothetical protein [Ricinus communis]
           gi|223547423|gb|EEF48918.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 392

 Score =  185 bits (469), Expect = 4e-45
 Identities = 92/111 (82%), Positives = 101/111 (90%)
 Frame = +2

Query: 2   RPPLAGSSGPIAKFFFSCPDNAFQVAFGGTSYSLLQRIGAIARNGAKLFAVGTSASLVGT 181
           RPPLAG++GPIAKFF +CPDNAFQVA  GTSYSLLQR+GAI RNGAKLFAVGT++SLVGT
Sbjct: 226 RPPLAGTAGPIAKFFHNCPDNAFQVALAGTSYSLLQRLGAIVRNGAKLFAVGTTSSLVGT 285

Query: 182 GVTNALIKARKTVDKSFVGEVEELPIVSTSVAYGVYMAISSNLRYQLLAGV 334
            VTNALI ARK VDKS  GEVE +PIVSTSVAYGVYMA+SSNLRYQ+LAGV
Sbjct: 286 AVTNALINARKAVDKSSAGEVENVPIVSTSVAYGVYMAVSSNLRYQVLAGV 336


>ref|XP_002299927.1| predicted protein [Populus trichocarpa] gi|222847185|gb|EEE84732.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/111 (80%), Positives = 100/111 (90%)
 Frame = +2

Query: 2   RPPLAGSSGPIAKFFFSCPDNAFQVAFGGTSYSLLQRIGAIARNGAKLFAVGTSASLVGT 181
           RPPLA S+GP++KFF+SCPDNAFQVA  GTSYS LQRIGAI RNGAKLFAVGT ASLVG 
Sbjct: 222 RPPLALSAGPVSKFFYSCPDNAFQVALAGTSYSFLQRIGAILRNGAKLFAVGTGASLVGV 281

Query: 182 GVTNALIKARKTVDKSFVGEVEELPIVSTSVAYGVYMAISSNLRYQLLAGV 334
           G+TNALI ARK +DKSF GE E++PI+STSVAYGVYMA+SSNLRYQ+LAGV
Sbjct: 282 GITNALINARKALDKSFAGEAEDVPILSTSVAYGVYMAVSSNLRYQILAGV 332


>gb|AFW77857.1| hypothetical protein ZEAMMB73_229307 [Zea mays]
          Length = 387

 Score =  181 bits (459), Expect = 5e-44
 Identities = 89/111 (80%), Positives = 100/111 (90%)
 Frame = +2

Query: 2   RPPLAGSSGPIAKFFFSCPDNAFQVAFGGTSYSLLQRIGAIARNGAKLFAVGTSASLVGT 181
           +PPLA +SG IAKFF++CPDNAFQVA  GTSYSLLQR+GAI RNGAKLFAVGTSASL+GT
Sbjct: 231 QPPLAMNSGAIAKFFYNCPDNAFQVALSGTSYSLLQRVGAILRNGAKLFAVGTSASLIGT 290

Query: 182 GVTNALIKARKTVDKSFVGEVEELPIVSTSVAYGVYMAISSNLRYQLLAGV 334
           GVTNALIKAR+   K F GEVE +PI+STSVAYGVYMA+SSNLRYQ+LAGV
Sbjct: 291 GVTNALIKARQAASKDFAGEVENIPILSTSVAYGVYMAVSSNLRYQVLAGV 341


>ref|XP_003534389.1| PREDICTED: uncharacterized protein LOC100808020 [Glycine max]
          Length = 376

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/111 (79%), Positives = 99/111 (89%)
 Frame = +2

Query: 2   RPPLAGSSGPIAKFFFSCPDNAFQVAFGGTSYSLLQRIGAIARNGAKLFAVGTSASLVGT 181
           RPPLA S+G IAKFF+ CP+NAFQVA  GTSYSL+QRIGAI RNGAKLFAVGT ASL+GT
Sbjct: 216 RPPLAVSAGTIAKFFYGCPENAFQVALAGTSYSLIQRIGAIVRNGAKLFAVGTGASLIGT 275

Query: 182 GVTNALIKARKTVDKSFVGEVEELPIVSTSVAYGVYMAISSNLRYQLLAGV 334
           GVTNALI ARK VDKSF  E E++PI+STS+AYGVYMA+SSNLRYQ+LAGV
Sbjct: 276 GVTNALINARKVVDKSFAAEAEDVPIISTSIAYGVYMAVSSNLRYQVLAGV 326


>ref|XP_003539855.1| PREDICTED: uncharacterized protein LOC100818590 [Glycine max]
          Length = 372

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/111 (79%), Positives = 99/111 (89%)
 Frame = +2

Query: 2   RPPLAGSSGPIAKFFFSCPDNAFQVAFGGTSYSLLQRIGAIARNGAKLFAVGTSASLVGT 181
           RPPLA S+G IAKFF+ CP+NAFQVA  GTSYSL+QRIGAI RNGAKLFAVGT ASL+GT
Sbjct: 212 RPPLAVSAGTIAKFFYGCPENAFQVALAGTSYSLIQRIGAIVRNGAKLFAVGTGASLIGT 271

Query: 182 GVTNALIKARKTVDKSFVGEVEELPIVSTSVAYGVYMAISSNLRYQLLAGV 334
           GVTNALI ARK VDKSF  E E++PI+STS+AYGVYMA+SSNLRYQ+LAGV
Sbjct: 272 GVTNALINARKVVDKSFAAEAEDVPIISTSIAYGVYMAVSSNLRYQVLAGV 322


Top