BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027919
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_850877.2| flap endonuclease-1 [Arabidopsis thaliana] gi|3...   148   5e-34
ref|XP_002874315.1| hypothetical protein ARALYDRAFT_489493 [Arab...   148   5e-34
ref|NP_001154740.1| flap endonuclease-1 [Arabidopsis thaliana] g...   148   5e-34
gb|AAC13596.1| similar to FLAP endonuclease-1 (SW:P39748) [Arabi...   148   5e-34
ref|XP_002512592.1| flap endonuclease-1, putative [Ricinus commu...   146   1e-33

>ref|NP_850877.2| flap endonuclease-1 [Arabidopsis thaliana]
           gi|332006193|gb|AED93576.1| flap endonuclease-1
           [Arabidopsis thaliana]
          Length = 453

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/112 (67%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
 Frame = +2

Query: 2   DIEKYSKRTVKVTRKHNEDCKKLLRLMGXXXXXXXXXXXXXXXXLCKTGKVYAVAAEDMD 181
           DIEKYSKRTVKVT++HN+DCK+LLRLMG                LCK+GKVY VA+EDMD
Sbjct: 123 DIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMD 182

Query: 182 TLTFGAPLFLRQLMG-SCGKVLVVEYEVAKILEELKLTMDQFIDLCILCGCD 334
           +LTFGAP FLR LM  S  K+ V+E+EVAKILEEL+LTMDQFIDLCIL GCD
Sbjct: 183 SLTFGAPKFLRHLMDPSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCD 234


>ref|XP_002874315.1| hypothetical protein ARALYDRAFT_489493 [Arabidopsis lyrata subsp.
           lyrata] gi|297320152|gb|EFH50574.1| hypothetical protein
           ARALYDRAFT_489493 [Arabidopsis lyrata subsp. lyrata]
          Length = 448

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/112 (67%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
 Frame = +2

Query: 2   DIEKYSKRTVKVTRKHNEDCKKLLRLMGXXXXXXXXXXXXXXXXLCKTGKVYAVAAEDMD 181
           DIEKYSKRTVKVT++HN+DCK+LLRLMG                LCK+GKVY VA+EDMD
Sbjct: 123 DIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMD 182

Query: 182 TLTFGAPLFLRQLMG-SCGKVLVVEYEVAKILEELKLTMDQFIDLCILCGCD 334
           +LTFGAP FLR LM  S  K+ V+E+EVAKILEEL+LTMDQFIDLCIL GCD
Sbjct: 183 SLTFGAPKFLRHLMDPSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCD 234


>ref|NP_001154740.1| flap endonuclease-1 [Arabidopsis thaliana]
           gi|317374929|sp|O65251.2|FEN1_ARATH RecName: Full=Flap
           endonuclease 1; Short=FEN-1; AltName: Full=Flap
           structure-specific endonuclease 1
           gi|332006194|gb|AED93577.1| flap endonuclease-1
           [Arabidopsis thaliana]
          Length = 383

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/112 (67%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
 Frame = +2

Query: 2   DIEKYSKRTVKVTRKHNEDCKKLLRLMGXXXXXXXXXXXXXXXXLCKTGKVYAVAAEDMD 181
           DIEKYSKRTVKVT++HN+DCK+LLRLMG                LCK+GKVY VA+EDMD
Sbjct: 123 DIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMD 182

Query: 182 TLTFGAPLFLRQLMG-SCGKVLVVEYEVAKILEELKLTMDQFIDLCILCGCD 334
           +LTFGAP FLR LM  S  K+ V+E+EVAKILEEL+LTMDQFIDLCIL GCD
Sbjct: 183 SLTFGAPKFLRHLMDPSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCD 234


>gb|AAC13596.1| similar to FLAP endonuclease-1 (SW:P39748) [Arabidopsis thaliana]
          Length = 362

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/112 (67%), Positives = 87/112 (77%), Gaps = 1/112 (0%)
 Frame = +2

Query: 2   DIEKYSKRTVKVTRKHNEDCKKLLRLMGXXXXXXXXXXXXXXXXLCKTGKVYAVAAEDMD 181
           DIEKYSKRTVKVT++HN+DCK+LLRLMG                LCK+GKVY VA+EDMD
Sbjct: 156 DIEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMD 215

Query: 182 TLTFGAPLFLRQLMG-SCGKVLVVEYEVAKILEELKLTMDQFIDLCILCGCD 334
           +LTFGAP FLR LM  S  K+ V+E+EVAKILEEL+LTMDQFIDLCIL GCD
Sbjct: 216 SLTFGAPKFLRHLMDPSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCD 267


>ref|XP_002512592.1| flap endonuclease-1, putative [Ricinus communis]
           gi|223548553|gb|EEF50044.1| flap endonuclease-1,
           putative [Ricinus communis]
          Length = 345

 Score =  146 bits (369), Expect = 1e-33
 Identities = 76/112 (67%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
 Frame = +2

Query: 2   DIEKYSKRTVKVTRKHNEDCKKLLRLMGXXXXXXXXXXXXXXXXLCKTGKVYAVAAEDMD 181
           DIEK+SKRTVKVT++HNEDCK+LLRLMG                LCK+GKVYAVA+EDMD
Sbjct: 85  DIEKFSKRTVKVTKQHNEDCKRLLRLMGVPVIEAPSEAEAECAALCKSGKVYAVASEDMD 144

Query: 182 TLTFGAPLFLRQLMG-SCGKVLVVEYEVAKILEELKLTMDQFIDLCILCGCD 334
           +LTFGAP FLR LM  S  KV V+E+E +KILEEL LTMDQFIDLCIL GCD
Sbjct: 145 SLTFGAPRFLRHLMDPSSRKVPVMEFETSKILEELNLTMDQFIDLCILSGCD 196