BLASTX nr result

ID: Coptis21_contig00027917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027917
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283156.1| PREDICTED: uncharacterized protein LOC100245...   242   9e-62
ref|XP_004143171.1| PREDICTED: zinc finger HIT domain-containing...   241   1e-61
ref|XP_002319400.1| predicted protein [Populus trichocarpa] gi|2...   238   2e-60
ref|XP_003551208.1| PREDICTED: zinc finger HIT domain-containing...   235   8e-60
ref|NP_001050184.1| Os03g0367800 [Oryza sativa Japonica Group] g...   235   8e-60

>ref|XP_002283156.1| PREDICTED: uncharacterized protein LOC100245318 [Vitis vinifera]
           gi|297739700|emb|CBI29882.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score =  242 bits (617), Expect = 9e-62
 Identities = 120/172 (69%), Positives = 136/172 (79%)
 Frame = +3

Query: 126 VEENSGPFRRTSSRTRKLANKMAAALASTDNRTQAALARLEALENDNAAPEPVEAYXXXX 305
           ++++SG  RR S+RTRK+A++MAAALASTDNR QAALARLEALENDNA  E ++      
Sbjct: 1   MDDDSGSLRRMSTRTRKVASRMAAALASTDNRNQAALARLEALENDNAGMETIDVNDDED 60

Query: 306 XXXXXXXXQVYTKKQSKNAKRKTRQAKALENVKKAPRTFMELLQEANLEALPSNVPSYLR 485
                       K+QSK  KR TRQAKALEN +KAPRTF+EL+ EANLE+LP +VPSYLR
Sbjct: 61  ASLDDDDEGYAQKRQSKGTKRTTRQAKALENARKAPRTFLELVHEANLESLPPHVPSYLR 120

Query: 486 AAVGPPSSTSRRHFCAVCGFTANYTCVRCGMRFCSPRCQIIHNDTRCLKFVA 641
           AAVGPPSSTSRRHFC VCGF ANYTCVRCG RFCS RCQ IHNDTRCLKFVA
Sbjct: 121 AAVGPPSSTSRRHFCTVCGFAANYTCVRCGTRFCSTRCQNIHNDTRCLKFVA 172


>ref|XP_004143171.1| PREDICTED: zinc finger HIT domain-containing protein 1 homolog
           [Cucumis sativus] gi|449505173|ref|XP_004162397.1|
           PREDICTED: LOW QUALITY PROTEIN: zinc finger HIT
           domain-containing protein 1 homolog [Cucumis sativus]
          Length = 171

 Score =  241 bits (616), Expect = 1e-61
 Identities = 124/171 (72%), Positives = 138/171 (80%)
 Frame = +3

Query: 129 EENSGPFRRTSSRTRKLANKMAAALASTDNRTQAALARLEALENDNAAPEPVEAYXXXXX 308
           ++++ PFRR SSRTRK+A KM AALAS+DNRTQAALARLEALENDNA  E VE       
Sbjct: 3   DDSTNPFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVEVVENIDDEDA 62

Query: 309 XXXXXXXQVYTKKQSKNAKRKTRQAKALENVKKAPRTFMELLQEANLEALPSNVPSYLRA 488
                  Q Y K+QSK  KRKTRQAKALE  KKAP+TFMELL EANLE+LP +VPSYL+A
Sbjct: 63  SLDDDD-QAYIKRQSKGTKRKTRQAKALE-AKKAPKTFMELLHEANLESLPPHVPSYLKA 120

Query: 489 AVGPPSSTSRRHFCAVCGFTANYTCVRCGMRFCSPRCQIIHNDTRCLKFVA 641
           AVGPPSSTSRRHFC VCGF A+YTC+RCG+RFCS RCQ IHNDTRCLKFVA
Sbjct: 121 AVGPPSSTSRRHFCTVCGFAASYTCIRCGIRFCSSRCQNIHNDTRCLKFVA 171


>ref|XP_002319400.1| predicted protein [Populus trichocarpa] gi|222857776|gb|EEE95323.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  238 bits (606), Expect = 2e-60
 Identities = 121/171 (70%), Positives = 133/171 (77%)
 Frame = +3

Query: 129 EENSGPFRRTSSRTRKLANKMAAALASTDNRTQAALARLEALENDNAAPEPVEAYXXXXX 308
           ++ S PFRR S RTRK+A KMAAALAS DNRTQAA+ARLEALEND    E VEA      
Sbjct: 3   DDVSNPFRRMSMRTRKIAPKMAAALASNDNRTQAAIARLEALENDYTGMETVEAVDDDEA 62

Query: 309 XXXXXXXQVYTKKQSKNAKRKTRQAKALENVKKAPRTFMELLQEANLEALPSNVPSYLRA 488
                   VY +K+ K  KRKTRQAKALEN +KAPR F+ELL EANLEALP +VPSYLRA
Sbjct: 63  SLDDDD-DVYIQKKQKGTKRKTRQAKALENARKAPRNFLELLHEANLEALPPHVPSYLRA 121

Query: 489 AVGPPSSTSRRHFCAVCGFTANYTCVRCGMRFCSPRCQIIHNDTRCLKFVA 641
           AVGPPSST RRHFC VCGFT+NYTC +CGMRFCS RCQ IH+DTRCLKFVA
Sbjct: 122 AVGPPSSTCRRHFCTVCGFTSNYTCAKCGMRFCSIRCQKIHDDTRCLKFVA 172


>ref|XP_003551208.1| PREDICTED: zinc finger HIT domain-containing protein 1 homolog
           [Glycine max]
          Length = 173

 Score =  235 bits (600), Expect = 8e-60
 Identities = 122/172 (70%), Positives = 136/172 (79%), Gaps = 1/172 (0%)
 Frame = +3

Query: 129 EENSGPFRRTSSRTRKLANKMAAALASTDNRTQAALARLEALENDNAAPEPVEAYXXXXX 308
           ++ S   RR SSRTRK+A+KMAAALAS DNRTQAALARL+ALENDNA  E  +A      
Sbjct: 3   DDGSNSIRRMSSRTRKVASKMAAALASADNRTQAALARLDALENDNAGFEIADANNDDDD 62

Query: 309 XXXXXXXQVYT-KKQSKNAKRKTRQAKALENVKKAPRTFMELLQEANLEALPSNVPSYLR 485
                  Q Y  KKQSK  KRKTRQAKALE  ++APRTF+ELL EANLE+LP +VPSY +
Sbjct: 63  ASLDEEDQFYMQKKQSKGTKRKTRQAKALE-ARRAPRTFLELLHEANLESLPPHVPSYWK 121

Query: 486 AAVGPPSSTSRRHFCAVCGFTANYTCVRCGMRFCSPRCQIIHNDTRCLKFVA 641
           AAVGPPSSTSRRHFC VCGF+ANYTCVRCGMRFCS RCQ +HNDTRCLKFVA
Sbjct: 122 AAVGPPSSTSRRHFCTVCGFSANYTCVRCGMRFCSHRCQNVHNDTRCLKFVA 173


>ref|NP_001050184.1| Os03g0367800 [Oryza sativa Japonica Group]
           gi|113548655|dbj|BAF12098.1| Os03g0367800, partial
           [Oryza sativa Japonica Group]
          Length = 203

 Score =  235 bits (600), Expect = 8e-60
 Identities = 120/174 (68%), Positives = 140/174 (80%), Gaps = 1/174 (0%)
 Frame = +3

Query: 123 EVEENSGPFRRTSSRTRKLANKMAAALASTDNRTQAALARLEALENDNAAPEPVEAYXXX 302
           E EEN GPFRRTS+RTR++A +MA+ALAS+DNR QAALARLEALE+DNA PE V+     
Sbjct: 32  EEEENVGPFRRTSARTRRMATRMASALASSDNRAQAALARLEALESDNAGPEVVDLNDDD 91

Query: 303 XXXXXXXXXQVYT-KKQSKNAKRKTRQAKALENVKKAPRTFMELLQEANLEALPSNVPSY 479
                     V   +KQSKN KRKTRQ KALE  KKA R+FM++LQEANLE+LP +VP+Y
Sbjct: 92  EYGSADEEDHVLMQRKQSKNMKRKTRQGKALE--KKAARSFMDVLQEANLESLPPHVPTY 149

Query: 480 LRAAVGPPSSTSRRHFCAVCGFTANYTCVRCGMRFCSPRCQIIHNDTRCLKFVA 641
            RAAVGPPS++SRRH+C+VCG TANYTCVRCG RFCS RCQ+IHNDTRCLKFVA
Sbjct: 150 SRAAVGPPSTSSRRHYCSVCGSTANYTCVRCGTRFCSCRCQVIHNDTRCLKFVA 203


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