BLASTX nr result
ID: Coptis21_contig00027904
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00027904 (635 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002526386.1| conserved hypothetical protein [Ricinus comm... 65 1e-08 ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent hel... 64 3e-08 emb|CBI15784.3| unnamed protein product [Vitis vinifera] 58 1e-06 ref|XP_002319444.1| predicted protein [Populus trichocarpa] gi|2... 56 6e-06 >ref|XP_002526386.1| conserved hypothetical protein [Ricinus communis] gi|223534248|gb|EEF35962.1| conserved hypothetical protein [Ricinus communis] Length = 795 Score = 65.1 bits (157), Expect = 1e-08 Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 3/131 (2%) Frame = -2 Query: 562 GVDPTGPSERNDDCDEVESSLNEKEDTSSSPVTEPASERLVSTKQPRPVEDET--SSRKC 389 G+ P+ S DD + + N E S + VTE + P P+ DE S K Sbjct: 671 GMQPSHLSPSKDDPVQNKVPANSVEIASLTTVTERKELK------PDPIHDEDLCSPEKR 724 Query: 388 RRISGIEEGTVALQATEEGVVELLNNRD-GVPLSDIVDHFKGSNXXXXXXXXXXXXXEFI 212 ++ + + AL+ATE +++LL N D GV LSDI+ HFKGS +F+ Sbjct: 725 QKTIITDGSSTALEATETSILDLLKNYDEGVSLSDILKHFKGSREDSVIDLLSSLEADFM 784 Query: 211 IYKKNDLYRVL 179 I+KKN+LYR+L Sbjct: 785 IFKKNNLYRLL 795 >ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis vinifera] Length = 913 Score = 63.5 bits (153), Expect = 3e-08 Identities = 52/147 (35%), Positives = 74/147 (50%), Gaps = 8/147 (5%) Frame = -2 Query: 595 EVPNDKSEPSLGVDPT----GPSERNDDCDEVESSLN-EKEDTSSSPVTEPASERLVSTK 431 E+P+ SE S+ GP E D + +S E E T+S P T Sbjct: 773 ELPSKASEASMDTMHKCLIRGPCEVETSVDNIIASCCLENEVTTSIPFTVDLD------M 826 Query: 430 QPRPVEDETSS-RKCRRISGIEEGTVALQ-ATEEGVVELLNNRD-GVPLSDIVDHFKGSN 260 P V DE S RK ++I EE ++ +Q ATE +++LL N D GVPLSD++ HF GS Sbjct: 827 HPPGVHDEIFSLRKRQKIDEPEEESLIMQEATESSILDLLRNYDDGVPLSDVLKHFNGSR 886 Query: 259 XXXXXXXXXXXXXEFIIYKKNDLYRVL 179 EF+I+KKN++YR++ Sbjct: 887 EEYVVDLLSNLEGEFMIFKKNNMYRLM 913 >emb|CBI15784.3| unnamed protein product [Vitis vinifera] Length = 969 Score = 58.2 bits (139), Expect = 1e-06 Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 3/148 (2%) Frame = -2 Query: 613 ECTKMGEVPNDKSEPSLGVDPTGPSERNDDCDEVESSLNEKEDTSSSPVTEPASERLVST 434 +C EV + +L D D + L T+S P T Sbjct: 828 DCGMSKEVIPPGNHNTLTADELPSKASEASMDTMHKCLIRGPFTTSIPFTVDLD------ 881 Query: 433 KQPRPVEDETSS-RKCRRISGIEEGTVALQ-ATEEGVVELLNNRD-GVPLSDIVDHFKGS 263 P V DE S RK ++I EE ++ +Q ATE +++LL N D GVPLSD++ HF GS Sbjct: 882 MHPPGVHDEIFSLRKRQKIDEPEEESLIMQEATESSILDLLRNYDDGVPLSDVLKHFNGS 941 Query: 262 NXXXXXXXXXXXXXEFIIYKKNDLYRVL 179 EF+I+KKN++YR++ Sbjct: 942 REEYVVDLLSNLEGEFMIFKKNNMYRLM 969 >ref|XP_002319444.1| predicted protein [Populus trichocarpa] gi|222857820|gb|EEE95367.1| predicted protein [Populus trichocarpa] Length = 854 Score = 55.8 bits (133), Expect = 6e-06 Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 2/123 (1%) Frame = -2 Query: 541 SERNDDCDEVESSLNEKEDTSSSPVTE-PASERLVSTKQPRPVEDETSSRKCRRISGIEE 365 + + D+ E ES + + V E S ++++T +ETSS ++ EE Sbjct: 734 TSKADEFVESESGMVSTGTSCLDTVHEVEISVKIMATHCCSDHNEETSS--LMKVDIPEE 791 Query: 364 GTVALQATEEGVVELLNNRD-GVPLSDIVDHFKGSNXXXXXXXXXXXXXEFIIYKKNDLY 188 T AL+ATE +++ L N D GV + DI++HF GS +F+I+KKNDLY Sbjct: 792 STTALEATESSILDWLKNYDEGVFIRDILEHFNGSKEELVIDLLSSLESDFVIFKKNDLY 851 Query: 187 RVL 179 +L Sbjct: 852 MLL 854