BLASTX nr result

ID: Coptis21_contig00027898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027898
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT81164.1| membrane acyl-CoA binding protein [Agave americana]    107   1e-21
gb|ACN30840.1| unknown [Zea mays] gi|414584733|tpg|DAA35304.1| T...    96   2e-18
dbj|BAJ94357.1| predicted protein [Hordeum vulgare subsp. vulgare]     95   5e-18
ref|NP_001146911.1| acyl-CoA-binding domain-containing protein 6...    94   1e-17
emb|CAJ86283.1| H0901F07.20 [Oryza sativa Indica Group] gi|90399...    94   1e-17

>gb|AAT81164.1| membrane acyl-CoA binding protein [Agave americana]
          Length = 355

 Score =  107 bits (267), Expect = 1e-21
 Identities = 65/157 (41%), Positives = 84/157 (53%), Gaps = 42/157 (26%)
 Frame = +2

Query: 8   QSVFIGLIFAFLVAKLFSILVSFKEGNFKLVRLED------------------------- 112
           Q+VFIGLIFAFLVAKL S ++SF+E + K+VR ED                         
Sbjct: 9   QAVFIGLIFAFLVAKLISTVISFREDHLKVVREEDLISETVEATPSDDVKNLEGEPRGLD 68

Query: 113 -----------------DDWDEVGVETDLLEEEFNAATTFITCNVLKEEGFVLSNEVILE 241
                            DDW+  G+E+  L+E F+AAT F+           +SNE+ L+
Sbjct: 69  AGKLVSGEARVSDDDDDDDWE--GIESTELDELFSAATAFVAATAADRNSAKVSNELQLQ 126

Query: 242 LFGLYKIATHGPCNDAHQSSSLKVSNRAKWEAWQRLG 352
           L+GLYKIAT GPC    Q S+LKV+ RAKW AWQ+LG
Sbjct: 127 LYGLYKIATEGPCTKP-QPSALKVTARAKWNAWQKLG 162


>gb|ACN30840.1| unknown [Zea mays] gi|414584733|tpg|DAA35304.1| TPA:
           acyl-CoA-binding domain-containing protein 6 isoform 1
           [Zea mays] gi|414584734|tpg|DAA35305.1| TPA:
           acyl-CoA-binding domain-containing protein 6 isoform 2
           [Zea mays]
          Length = 328

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 59/143 (41%), Positives = 77/143 (53%), Gaps = 28/143 (19%)
 Frame = +2

Query: 8   QSVFIGLIFAFLVAKLFSILVSFKEGNFKLVRL--------------------------- 106
           Q+  IGL+FAFLVAKL S +++FKE N ++ R                            
Sbjct: 10  QAAAIGLLFAFLVAKLISTVIAFKEDNLRITRSPPTSPTAAAAAAAPPVPSHYGSTDGGS 69

Query: 107 -EDDDWDEVGVETDLLEEEFNAATTFITCNVLKEEGFVLSNEVILELFGLYKIATHGPCN 283
             D DW+  GVE+  L+EEF+AA+ FI  +     G  +  E  L L+GLYKIAT GPC 
Sbjct: 70  GSDSDWE--GVESTELDEEFSAASAFIAASAAS--GTSVPEEAQLRLYGLYKIATEGPCT 125

Query: 284 DAHQSSSLKVSNRAKWEAWQRLG 352
            A Q S+LK+  RAKW AW +LG
Sbjct: 126 -APQPSALKLKARAKWNAWHKLG 147


>dbj|BAJ94357.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 324

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 58/142 (40%), Positives = 76/142 (53%), Gaps = 27/142 (19%)
 Frame = +2

Query: 8   QSVFIGLIFAFLVAKLFSILVSFKEGNFKLVRL--------------------------- 106
           QS  IGLIFAFLVAKL S++++FKE N ++ R                            
Sbjct: 10  QSAVIGLIFAFLVAKLISVVLAFKEDNLRITRSAPDPSPSPSPDAAAPDPSPALDGGDSD 69

Query: 107 EDDDWDEVGVETDLLEEEFNAATTFITCNVLKEEGFVLSNEVILELFGLYKIATHGPCND 286
            D D D  GVE+  L+E+F+AA+ F+  +        +  E  L L+GLYKIAT GPC  
Sbjct: 70  SDSDGDWEGVESTELDEDFSAASAFVAASAAG-----VPEEAQLRLYGLYKIATEGPCT- 123

Query: 287 AHQSSSLKVSNRAKWEAWQRLG 352
           A Q S+LK+  RAKW AW +LG
Sbjct: 124 APQPSALKLKARAKWNAWNKLG 145


>ref|NP_001146911.1| acyl-CoA-binding domain-containing protein 6 [Zea mays]
           gi|195605120|gb|ACG24390.1| acyl-CoA-binding
           domain-containing protein 6 [Zea mays]
          Length = 330

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 57/145 (39%), Positives = 77/145 (53%), Gaps = 30/145 (20%)
 Frame = +2

Query: 8   QSVFIGLIFAFLVAKLFSILVSFKEGNFKLVRL--------------------------- 106
           Q+  IGL+FAFL+AKL S +++FKE N ++ R                            
Sbjct: 10  QAAAIGLLFAFLLAKLISTVIAFKEDNLRITRSPPSSPTAAAAAPAPATPPLPSQHDAGI 69

Query: 107 ---EDDDWDEVGVETDLLEEEFNAATTFITCNVLKEEGFVLSNEVILELFGLYKIATHGP 277
               D DW+  GVE+  L+EEF+AA+ F+  +     G  +  E  L L+GLYKIAT GP
Sbjct: 70  GSGSDSDWE--GVESTELDEEFSAASAFVAASAAS--GTSVPEEAQLRLYGLYKIATEGP 125

Query: 278 CNDAHQSSSLKVSNRAKWEAWQRLG 352
           C  A Q S+LK+  RAKW AW +LG
Sbjct: 126 CT-APQPSALKLKARAKWNAWHKLG 149


>emb|CAJ86283.1| H0901F07.20 [Oryza sativa Indica Group] gi|90399069|emb|CAJ86291.1|
           H0124B04.8 [Oryza sativa Indica Group]
           gi|125550265|gb|EAY96087.1| hypothetical protein
           OsI_17961 [Oryza sativa Indica Group]
          Length = 334

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 57/148 (38%), Positives = 78/148 (52%), Gaps = 33/148 (22%)
 Frame = +2

Query: 8   QSVFIGLIFAFLVAKLFSILVSFKEGNFKLVRL--------------------------- 106
           Q+  IGL+FAFLVAKL S +++FKE N ++ R                            
Sbjct: 10  QAAVIGLLFAFLVAKLISTVIAFKEDNLRITRSTPTSPSAADTPAAPAPPPASLDGGHGD 69

Query: 107 ------EDDDWDEVGVETDLLEEEFNAATTFITCNVLKEEGFVLSNEVILELFGLYKIAT 268
                  D DW+  GVE+  L+EEF+AA+ F+  +     G  +  +  L+L+GLYKIAT
Sbjct: 70  TSDGSGSDSDWE--GVESTELDEEFSAASAFVAASAAS--GTSVPEQAQLQLYGLYKIAT 125

Query: 269 HGPCNDAHQSSSLKVSNRAKWEAWQRLG 352
            GPC  A Q S+LK+  RAKW AW +LG
Sbjct: 126 EGPCT-APQPSALKLKARAKWNAWHKLG 152


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