BLASTX nr result
ID: Coptis21_contig00027898
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00027898 (356 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAT81164.1| membrane acyl-CoA binding protein [Agave americana] 107 1e-21 gb|ACN30840.1| unknown [Zea mays] gi|414584733|tpg|DAA35304.1| T... 96 2e-18 dbj|BAJ94357.1| predicted protein [Hordeum vulgare subsp. vulgare] 95 5e-18 ref|NP_001146911.1| acyl-CoA-binding domain-containing protein 6... 94 1e-17 emb|CAJ86283.1| H0901F07.20 [Oryza sativa Indica Group] gi|90399... 94 1e-17 >gb|AAT81164.1| membrane acyl-CoA binding protein [Agave americana] Length = 355 Score = 107 bits (267), Expect = 1e-21 Identities = 65/157 (41%), Positives = 84/157 (53%), Gaps = 42/157 (26%) Frame = +2 Query: 8 QSVFIGLIFAFLVAKLFSILVSFKEGNFKLVRLED------------------------- 112 Q+VFIGLIFAFLVAKL S ++SF+E + K+VR ED Sbjct: 9 QAVFIGLIFAFLVAKLISTVISFREDHLKVVREEDLISETVEATPSDDVKNLEGEPRGLD 68 Query: 113 -----------------DDWDEVGVETDLLEEEFNAATTFITCNVLKEEGFVLSNEVILE 241 DDW+ G+E+ L+E F+AAT F+ +SNE+ L+ Sbjct: 69 AGKLVSGEARVSDDDDDDDWE--GIESTELDELFSAATAFVAATAADRNSAKVSNELQLQ 126 Query: 242 LFGLYKIATHGPCNDAHQSSSLKVSNRAKWEAWQRLG 352 L+GLYKIAT GPC Q S+LKV+ RAKW AWQ+LG Sbjct: 127 LYGLYKIATEGPCTKP-QPSALKVTARAKWNAWQKLG 162 >gb|ACN30840.1| unknown [Zea mays] gi|414584733|tpg|DAA35304.1| TPA: acyl-CoA-binding domain-containing protein 6 isoform 1 [Zea mays] gi|414584734|tpg|DAA35305.1| TPA: acyl-CoA-binding domain-containing protein 6 isoform 2 [Zea mays] Length = 328 Score = 96.3 bits (238), Expect = 2e-18 Identities = 59/143 (41%), Positives = 77/143 (53%), Gaps = 28/143 (19%) Frame = +2 Query: 8 QSVFIGLIFAFLVAKLFSILVSFKEGNFKLVRL--------------------------- 106 Q+ IGL+FAFLVAKL S +++FKE N ++ R Sbjct: 10 QAAAIGLLFAFLVAKLISTVIAFKEDNLRITRSPPTSPTAAAAAAAPPVPSHYGSTDGGS 69 Query: 107 -EDDDWDEVGVETDLLEEEFNAATTFITCNVLKEEGFVLSNEVILELFGLYKIATHGPCN 283 D DW+ GVE+ L+EEF+AA+ FI + G + E L L+GLYKIAT GPC Sbjct: 70 GSDSDWE--GVESTELDEEFSAASAFIAASAAS--GTSVPEEAQLRLYGLYKIATEGPCT 125 Query: 284 DAHQSSSLKVSNRAKWEAWQRLG 352 A Q S+LK+ RAKW AW +LG Sbjct: 126 -APQPSALKLKARAKWNAWHKLG 147 >dbj|BAJ94357.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 324 Score = 95.1 bits (235), Expect = 5e-18 Identities = 58/142 (40%), Positives = 76/142 (53%), Gaps = 27/142 (19%) Frame = +2 Query: 8 QSVFIGLIFAFLVAKLFSILVSFKEGNFKLVRL--------------------------- 106 QS IGLIFAFLVAKL S++++FKE N ++ R Sbjct: 10 QSAVIGLIFAFLVAKLISVVLAFKEDNLRITRSAPDPSPSPSPDAAAPDPSPALDGGDSD 69 Query: 107 EDDDWDEVGVETDLLEEEFNAATTFITCNVLKEEGFVLSNEVILELFGLYKIATHGPCND 286 D D D GVE+ L+E+F+AA+ F+ + + E L L+GLYKIAT GPC Sbjct: 70 SDSDGDWEGVESTELDEDFSAASAFVAASAAG-----VPEEAQLRLYGLYKIATEGPCT- 123 Query: 287 AHQSSSLKVSNRAKWEAWQRLG 352 A Q S+LK+ RAKW AW +LG Sbjct: 124 APQPSALKLKARAKWNAWNKLG 145 >ref|NP_001146911.1| acyl-CoA-binding domain-containing protein 6 [Zea mays] gi|195605120|gb|ACG24390.1| acyl-CoA-binding domain-containing protein 6 [Zea mays] Length = 330 Score = 94.0 bits (232), Expect = 1e-17 Identities = 57/145 (39%), Positives = 77/145 (53%), Gaps = 30/145 (20%) Frame = +2 Query: 8 QSVFIGLIFAFLVAKLFSILVSFKEGNFKLVRL--------------------------- 106 Q+ IGL+FAFL+AKL S +++FKE N ++ R Sbjct: 10 QAAAIGLLFAFLLAKLISTVIAFKEDNLRITRSPPSSPTAAAAAPAPATPPLPSQHDAGI 69 Query: 107 ---EDDDWDEVGVETDLLEEEFNAATTFITCNVLKEEGFVLSNEVILELFGLYKIATHGP 277 D DW+ GVE+ L+EEF+AA+ F+ + G + E L L+GLYKIAT GP Sbjct: 70 GSGSDSDWE--GVESTELDEEFSAASAFVAASAAS--GTSVPEEAQLRLYGLYKIATEGP 125 Query: 278 CNDAHQSSSLKVSNRAKWEAWQRLG 352 C A Q S+LK+ RAKW AW +LG Sbjct: 126 CT-APQPSALKLKARAKWNAWHKLG 149 >emb|CAJ86283.1| H0901F07.20 [Oryza sativa Indica Group] gi|90399069|emb|CAJ86291.1| H0124B04.8 [Oryza sativa Indica Group] gi|125550265|gb|EAY96087.1| hypothetical protein OsI_17961 [Oryza sativa Indica Group] Length = 334 Score = 94.0 bits (232), Expect = 1e-17 Identities = 57/148 (38%), Positives = 78/148 (52%), Gaps = 33/148 (22%) Frame = +2 Query: 8 QSVFIGLIFAFLVAKLFSILVSFKEGNFKLVRL--------------------------- 106 Q+ IGL+FAFLVAKL S +++FKE N ++ R Sbjct: 10 QAAVIGLLFAFLVAKLISTVIAFKEDNLRITRSTPTSPSAADTPAAPAPPPASLDGGHGD 69 Query: 107 ------EDDDWDEVGVETDLLEEEFNAATTFITCNVLKEEGFVLSNEVILELFGLYKIAT 268 D DW+ GVE+ L+EEF+AA+ F+ + G + + L+L+GLYKIAT Sbjct: 70 TSDGSGSDSDWE--GVESTELDEEFSAASAFVAASAAS--GTSVPEQAQLQLYGLYKIAT 125 Query: 269 HGPCNDAHQSSSLKVSNRAKWEAWQRLG 352 GPC A Q S+LK+ RAKW AW +LG Sbjct: 126 EGPCT-APQPSALKLKARAKWNAWHKLG 152