BLASTX nr result

ID: Coptis21_contig00027882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027882
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272060.1| PREDICTED: ABC transporter B family member 2...   326   5e-87
ref|XP_003613125.1| ABC transporter B family member [Medicago tr...   314   2e-83
ref|XP_003517500.1| PREDICTED: ABC transporter B family member 2...   307   2e-81
ref|XP_002887316.1| ATTAP1 [Arabidopsis lyrata subsp. lyrata] gi...   306   4e-81
emb|CBI18648.3| unnamed protein product [Vitis vinifera]              305   8e-81

>ref|XP_002272060.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
           [Vitis vinifera]
          Length = 705

 Score =  326 bits (835), Expect = 5e-87
 Identities = 169/261 (64%), Positives = 198/261 (75%), Gaps = 2/261 (0%)
 Frame = -2

Query: 779 KSAFFDEFSVGSFDRGADEGVRNDGIF--EKLKKWSVLVREIGYGGSFWNFPQHEQVVVN 606
           KSA  + FSV + +    EG  ND +   ++ ++    +R I  GGS+W+   H   ++ 
Sbjct: 64  KSASVNGFSVHNSN---PEGSENDQVEFPKRFRELVHFIRSIWPGGSWWSLSDHADFIMT 120

Query: 605 NKPVTAVFALRRMWDLVANDRWVIYSXXXXXXXXXLSEISIPHYLTASIFSAQSGSSVVF 426
            KPVT + AL+RMW LVA DRW+I++         +SEISIPH+LTASIFSAQSG  VVF
Sbjct: 121 AKPVTVLRALQRMWGLVAKDRWIIFAAFSALVLAAVSEISIPHFLTASIFSAQSGEIVVF 180

Query: 425 KGNARLLILLCFTSGICSGLRGCCFSIANMILVKRMREMLYSALLFQDISFFDSETVGDL 246
             N  LL+ LCF SGICSGLRGCCF IANMILVKRMRE LYSALLFQDISFFD+ETVGDL
Sbjct: 181 HRNVGLLVFLCFASGICSGLRGCCFGIANMILVKRMRETLYSALLFQDISFFDNETVGDL 240

Query: 245 TSRLGSDCQQVSRVIGNDLNMILRNILQGTGALIYLFILSWPLALSTLAICSVLSTIMLF 66
           TSRLG+DCQQVSRVIGNDLN+ILRN+LQGTGALIYL +LSWPL L T+ ICS L  IML 
Sbjct: 241 TSRLGADCQQVSRVIGNDLNLILRNVLQGTGALIYLLVLSWPLGLCTMMICSTLLIIMLL 300

Query: 65  YGQYQKKAARLTQEFTASANE 3
           YG+YQKKAA+L QEFTASANE
Sbjct: 301 YGRYQKKAAKLIQEFTASANE 321


>ref|XP_003613125.1| ABC transporter B family member [Medicago truncatula]
           gi|355514460|gb|AES96083.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 712

 Score =  314 bits (804), Expect = 2e-83
 Identities = 161/259 (62%), Positives = 195/259 (75%)
 Frame = -2

Query: 782 LKSAFFDEFSVGSFDRGADEGVRNDGIFEKLKKWSVLVREIGYGGSFWNFPQHEQVVVNN 603
           +KS+  +E S+ +    A     +D   ++++K    +  I  GG++WNF    +V + N
Sbjct: 60  IKSSSINEVSIHNNSESASNA--SDEFLDRIRKLVSFLPSIFPGGTWWNFSDDVEVSMFN 117

Query: 602 KPVTAVFALRRMWDLVANDRWVIYSXXXXXXXXXLSEISIPHYLTASIFSAQSGSSVVFK 423
           +PVT  +AL +MW+LVA DRWVI++         +SEISIPH+LTASIFSAQ G   VF 
Sbjct: 118 QPVTVWYALGKMWNLVAKDRWVIFAAFSALIIAAVSEISIPHFLTASIFSAQGGDIKVFH 177

Query: 422 GNARLLILLCFTSGICSGLRGCCFSIANMILVKRMREMLYSALLFQDISFFDSETVGDLT 243
           GN RLLIL+C TSGICSG+RGC F IANMILVKRMRE LYS+LL QDISFFD+ETVGDLT
Sbjct: 178 GNVRLLILMCVTSGICSGIRGCFFGIANMILVKRMRETLYSSLLLQDISFFDNETVGDLT 237

Query: 242 SRLGSDCQQVSRVIGNDLNMILRNILQGTGALIYLFILSWPLALSTLAICSVLSTIMLFY 63
           SRLG+DCQQVSRVIGNDLN+ILRN+LQG G+LIYL ILSWPL L TL ICS+L+ +ML Y
Sbjct: 238 SRLGADCQQVSRVIGNDLNLILRNVLQGGGSLIYLLILSWPLGLCTLVICSILAAVMLRY 297

Query: 62  GQYQKKAARLTQEFTASAN 6
           G YQKKAARL QE TASAN
Sbjct: 298 GWYQKKAARLIQEVTASAN 316


>ref|XP_003517500.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
           [Glycine max]
          Length = 701

 Score =  307 bits (786), Expect = 2e-81
 Identities = 154/235 (65%), Positives = 182/235 (77%)
 Frame = -2

Query: 707 GIFEKLKKWSVLVREIGYGGSFWNFPQHEQVVVNNKPVTAVFALRRMWDLVANDRWVIYS 528
           G+ ++++KW   +  I  GG +W F     V V  +PVT   AL +MWDLVA DRWVI++
Sbjct: 84  GLLDRIRKWVGFLPSILPGGRWWEFSGDVDVQVVAQPVTVWRALGKMWDLVARDRWVIFA 143

Query: 527 XXXXXXXXXLSEISIPHYLTASIFSAQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFS 348
                    +SEISIPH+LTASIFSAQS    VF  N RLL+LLC  SGICSG+RGC F 
Sbjct: 144 AFSALIVAAVSEISIPHFLTASIFSAQSADLAVFHRNVRLLVLLCVASGICSGIRGCFFG 203

Query: 347 IANMILVKRMREMLYSALLFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMILRNI 168
           IANMILVKRMRE LYS+LL QDISFFD+ETVGDLTSRLG+DCQQVSRVIGNDLN+I+RN+
Sbjct: 204 IANMILVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLIMRNV 263

Query: 167 LQGTGALIYLFILSWPLALSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANE 3
           LQG G+LIYL ILSWPL LSTL +CS+L+ +ML YG+YQKKAARL QE TASAN+
Sbjct: 264 LQGGGSLIYLLILSWPLGLSTLVVCSILAAVMLRYGRYQKKAARLIQEVTASAND 318


>ref|XP_002887316.1| ATTAP1 [Arabidopsis lyrata subsp. lyrata]
           gi|297333157|gb|EFH63575.1| ATTAP1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 700

 Score =  306 bits (784), Expect = 4e-81
 Identities = 157/237 (66%), Positives = 179/237 (75%)
 Frame = -2

Query: 713 NDGIFEKLKKWSVLVREIGYGGSFWNFPQHEQVVVNNKPVTAVFALRRMWDLVANDRWVI 534
           N  + EK+++    +R I  GGS+W+F          KPVT   AL RMW+LVA DRWVI
Sbjct: 80  NVSVPEKIRQCIDFIRTILPGGSWWSFSDEVDGRFIAKPVTVWRALTRMWELVAEDRWVI 139

Query: 533 YSXXXXXXXXXLSEISIPHYLTASIFSAQSGSSVVFKGNARLLILLCFTSGICSGLRGCC 354
           ++         LSEI+IPH+LTASIFSAQSG   VF+ N +LL+ LC TSGICSG+RGC 
Sbjct: 140 FAAFSTLIVAALSEITIPHFLTASIFSAQSGDIAVFRRNVKLLVTLCVTSGICSGIRGCF 199

Query: 353 FSIANMILVKRMREMLYSALLFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMILR 174
           F IANMILVKRMRE LYS LLFQDISFFDS+TVGDLTSRLGSDCQQVSRVIGNDLNMI R
Sbjct: 200 FGIANMILVKRMRETLYSTLLFQDISFFDSQTVGDLTSRLGSDCQQVSRVIGNDLNMIFR 259

Query: 173 NILQGTGALIYLFILSWPLALSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANE 3
           N+LQGTGALIYL ILSWPL L TL IC +L+ +M  YG YQKK A+L QE TASANE
Sbjct: 260 NVLQGTGALIYLLILSWPLGLCTLVICCILAAVMFVYGMYQKKTAKLIQEITASANE 316


>emb|CBI18648.3| unnamed protein product [Vitis vinifera]
          Length = 587

 Score =  305 bits (781), Expect = 8e-81
 Identities = 152/200 (76%), Positives = 168/200 (84%)
 Frame = -2

Query: 602 KPVTAVFALRRMWDLVANDRWVIYSXXXXXXXXXLSEISIPHYLTASIFSAQSGSSVVFK 423
           KPVT + AL+RMW LVA DRW+I++         +SEISIPH+LTASIFSAQSG  VVF 
Sbjct: 4   KPVTVLRALQRMWGLVAKDRWIIFAAFSALVLAAVSEISIPHFLTASIFSAQSGEIVVFH 63

Query: 422 GNARLLILLCFTSGICSGLRGCCFSIANMILVKRMREMLYSALLFQDISFFDSETVGDLT 243
            N  LL+ LCF SGICSGLRGCCF IANMILVKRMRE LYSALLFQDISFFD+ETVGDLT
Sbjct: 64  RNVGLLVFLCFASGICSGLRGCCFGIANMILVKRMRETLYSALLFQDISFFDNETVGDLT 123

Query: 242 SRLGSDCQQVSRVIGNDLNMILRNILQGTGALIYLFILSWPLALSTLAICSVLSTIMLFY 63
           SRLG+DCQQVSRVIGNDLN+ILRN+LQGTGALIYL +LSWPL L T+ ICS L  IML Y
Sbjct: 124 SRLGADCQQVSRVIGNDLNLILRNVLQGTGALIYLLVLSWPLGLCTMMICSTLLIIMLLY 183

Query: 62  GQYQKKAARLTQEFTASANE 3
           G+YQKKAA+L QEFTASANE
Sbjct: 184 GRYQKKAAKLIQEFTASANE 203


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