BLASTX nr result
ID: Coptis21_contig00027875
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00027875 (216 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 130 1e-28 ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putativ... 122 3e-26 ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2... 122 4e-26 ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 121 7e-26 ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab... 119 3e-25 >ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera] gi|297740757|emb|CBI30939.3| unnamed protein product [Vitis vinifera] Length = 516 Score = 130 bits (327), Expect = 1e-28 Identities = 58/71 (81%), Positives = 64/71 (90%) Frame = +3 Query: 3 PWMRSPVDVSLIEECSLKLLPCLDPRLEEALEIMGFTSLFPIQVAAWQETIGPGAFDRDL 182 PWMRSP+DVSL EEC L L PCLDPRLE AL+ MGF+SLFP+QVA WQET+GPGAF+RDL Sbjct: 14 PWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVWQETVGPGAFERDL 73 Query: 183 CINSPTGSGKT 215 CINSPTGSGKT Sbjct: 74 CINSPTGSGKT 84 >ref|XP_002532829.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223527420|gb|EEF29559.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 469 Score = 122 bits (306), Expect = 3e-26 Identities = 55/71 (77%), Positives = 61/71 (85%) Frame = +3 Query: 3 PWMRSPVDVSLIEECSLKLLPCLDPRLEEALEIMGFTSLFPIQVAAWQETIGPGAFDRDL 182 PWMR PVD+ EECSL L+PCLDPRL+ ALE MGFTSLF +QVA WQETIGPG F+RDL Sbjct: 15 PWMRCPVDIKQFEECSLDLVPCLDPRLKVALENMGFTSLFAVQVAVWQETIGPGNFERDL 74 Query: 183 CINSPTGSGKT 215 CIN+PTGSGKT Sbjct: 75 CINAPTGSGKT 85 >ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1| predicted protein [Populus trichocarpa] Length = 518 Score = 122 bits (305), Expect = 4e-26 Identities = 55/71 (77%), Positives = 62/71 (87%) Frame = +3 Query: 3 PWMRSPVDVSLIEECSLKLLPCLDPRLEEALEIMGFTSLFPIQVAAWQETIGPGAFDRDL 182 PWMRSPVDVS EE L +LPCLDPRL+ AL+ MGF +LFP+Q+A WQETIGPGAF+RDL Sbjct: 17 PWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQIAVWQETIGPGAFERDL 76 Query: 183 CINSPTGSGKT 215 CINSPTGSGKT Sbjct: 77 CINSPTGSGKT 87 >ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis sativus] gi|449490565|ref|XP_004158642.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis sativus] Length = 517 Score = 121 bits (303), Expect = 7e-26 Identities = 55/71 (77%), Positives = 63/71 (88%) Frame = +3 Query: 3 PWMRSPVDVSLIEECSLKLLPCLDPRLEEALEIMGFTSLFPIQVAAWQETIGPGAFDRDL 182 PWMRSPVDVSLIEEC L++LP LD RL+ AL+ MG +SLFP+Q+A WQE IGPG+FDRDL Sbjct: 14 PWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVWQEAIGPGSFDRDL 73 Query: 183 CINSPTGSGKT 215 CINSPTGSGKT Sbjct: 74 CINSPTGSGKT 84 >ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata] Length = 522 Score = 119 bits (297), Expect = 3e-25 Identities = 50/71 (70%), Positives = 63/71 (88%) Frame = +3 Query: 3 PWMRSPVDVSLIEECSLKLLPCLDPRLEEALEIMGFTSLFPIQVAAWQETIGPGAFDRDL 182 PWMR+PVDVS +E C+L+ LPCL+P+L++ALE MG +SLFP+QVA W ETIGPG F+RD+ Sbjct: 16 PWMRAPVDVSNVENCALETLPCLNPKLKKALENMGISSLFPVQVAVWHETIGPGGFERDI 75 Query: 183 CINSPTGSGKT 215 C+NSPTGSGKT Sbjct: 76 CVNSPTGSGKT 86