BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027867
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890288.1| rhomboid family protein [Arabidopsis lyrata ...    89   5e-16
ref|XP_004157442.1| PREDICTED: uncharacterized protein LOC101226...    87   1e-15
ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-...    87   1e-15
ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana]...    85   7e-15
ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14

>ref|XP_002890288.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336130|gb|EFH66547.1| rhomboid family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/85 (54%), Positives = 55/85 (64%)
 Frame = -2

Query: 361 PKKVEGLGASGAVNAILLLDIFLFPTKVLYFWLVIPVPAFLVGAFIIGTDLKRMTEKNSR 182
           P +  GLGASGAVNAI+LLDIFL PT  LY   +IPVPA L+G F+IG D+ R+TE NS 
Sbjct: 250 PSRTPGLGASGAVNAIMLLDIFLHPTATLYLEFIIPVPAMLLGIFLIGKDILRITEGNSN 309

Query: 181 VSXXXXXXXXXXXXXXXARIRRGRF 107
           +S               ARIR+GRF
Sbjct: 310 ISGSAHLGGAAVAAIAWARIRKGRF 334


>ref|XP_004157442.1| PREDICTED: uncharacterized protein LOC101226733 [Cucumis sativus]
          Length = 140

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/85 (52%), Positives = 55/85 (64%)
 Frame = -2

Query: 361 PKKVEGLGASGAVNAILLLDIFLFPTKVLYFWLVIPVPAFLVGAFIIGTDLKRMTEKNSR 182
           P + +GLGASGAVNAI+LLDIFLFP   LY    IPVPA L+G F+IG D+ RM E +S+
Sbjct: 56  PVRAKGLGASGAVNAIMLLDIFLFPKATLYLQFFIPVPAILLGIFLIGKDMLRMLENDSQ 115

Query: 181 VSXXXXXXXXXXXXXXXARIRRGRF 107
           +S               AR+RRGRF
Sbjct: 116 ISGSAHLGGAAVAALAWARVRRGRF 140


>ref|XP_004137444.1| PREDICTED: uncharacterized protein C13E7.11-like [Cucumis sativus]
          Length = 336

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/85 (52%), Positives = 55/85 (64%)
 Frame = -2

Query: 361 PKKVEGLGASGAVNAILLLDIFLFPTKVLYFWLVIPVPAFLVGAFIIGTDLKRMTEKNSR 182
           P + +GLGASGAVNAI+LLDIFLFP   LY    IPVPA L+G F+IG D+ RM E +S+
Sbjct: 252 PVRAKGLGASGAVNAIMLLDIFLFPKATLYLQFFIPVPAILLGIFLIGKDMLRMLENDSQ 311

Query: 181 VSXXXXXXXXXXXXXXXARIRRGRF 107
           +S               AR+RRGRF
Sbjct: 312 ISGSAHLGGAAVAALAWARVRRGRF 336


>ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana]
           gi|9795596|gb|AAF98414.1|AC026238_6 Hypothetical protein
           [Arabidopsis thaliana]
           gi|13877607|gb|AAK43881.1|AF370504_1 Unknown protein
           [Arabidopsis thaliana] gi|20148713|gb|AAM10247.1|
           unknown protein [Arabidopsis thaliana]
           gi|21592397|gb|AAM64348.1| unknown [Arabidopsis
           thaliana] gi|332191612|gb|AEE29733.1| RHOMBOID-like
           protein 12 [Arabidopsis thaliana]
          Length = 336

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 45/85 (52%), Positives = 53/85 (62%)
 Frame = -2

Query: 361 PKKVEGLGASGAVNAILLLDIFLFPTKVLYFWLVIPVPAFLVGAFIIGTDLKRMTEKNSR 182
           P +  GLGASGAVNAI+LLDIFL P   LY    IPVPA L+G F+IG D+ R+TE NS 
Sbjct: 250 PSRTPGLGASGAVNAIMLLDIFLHPRATLYLEFFIPVPAMLLGIFLIGKDILRITEGNSN 309

Query: 181 VSXXXXXXXXXXXXXXXARIRRGRF 107
           +S               ARIR+GRF
Sbjct: 310 ISGSAHLGGAAVAAIAWARIRKGRF 334


>ref|XP_002309495.1| predicted protein [Populus trichocarpa] gi|222855471|gb|EEE93018.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/83 (54%), Positives = 53/83 (63%)
 Frame = -2

Query: 355 KVEGLGASGAVNAILLLDIFLFPTKVLYFWLVIPVPAFLVGAFIIGTDLKRMTEKNSRVS 176
           +  GLGASGAVNAI+LLDIFL P   LYF  +IPVPA L+G F+IG DL R+ E NS +S
Sbjct: 160 RTPGLGASGAVNAIMLLDIFLNPRATLYFDFIIPVPAILLGIFLIGKDLLRVMEGNSNIS 219

Query: 175 XXXXXXXXXXXXXXXARIRRGRF 107
                          ARI+RGRF
Sbjct: 220 GSAHLGGAAVAAIAWARIKRGRF 242