BLASTX nr result

ID: Coptis21_contig00027848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027848
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302757.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002275599.1| PREDICTED: uncharacterized protein LOC100264...    95   5e-18
emb|CAN62070.1| hypothetical protein VITISV_036192 [Vitis vinifera]    95   5e-18
ref|XP_002320311.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17
ref|XP_003554542.1| PREDICTED: uncharacterized protein LOC100808...    91   1e-16

>ref|XP_002302757.1| predicted protein [Populus trichocarpa] gi|222844483|gb|EEE82030.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/87 (59%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
 Frame = -3

Query: 257 QDYIPSLKMXXXXXXXXXXXXXXXXS--KERVKLLPGENSSEGDSSFKCFSVSELKNKVM 84
           QDYIPSLKM                   +ERVKLLP +NS   D SFKCFSVS+LK KVM
Sbjct: 86  QDYIPSLKMANDDSGSISSSDSSSQQLSRERVKLLPSDNS---DPSFKCFSVSDLKKKVM 142

Query: 83  AGLCLSFEKEGHWRYLVLGKACYHLGL 3
           AGLC + +KEG WRYLVLG+AC HLGL
Sbjct: 143 AGLCKNCDKEGQWRYLVLGQACCHLGL 169


>ref|XP_002275599.1| PREDICTED: uncharacterized protein LOC100264117 [Vitis vinifera]
           gi|297743964|emb|CBI36934.3| unnamed protein product
           [Vitis vinifera]
          Length = 558

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 53/90 (58%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
 Frame = -3

Query: 257 QDYIPSLKMXXXXXXXXXXXXXXXXSKERVKLLPGENSSEGDS-----SFKCFSVSELKN 93
           QDYIPSLKM                 +ERVKLL   N+S  DS     SFKCFSVS+LK 
Sbjct: 84  QDYIPSLKMVSDDSSSDNSSQQLS--RERVKLLSSSNNSSSDSPIRDPSFKCFSVSDLKK 141

Query: 92  KVMAGLCLSFEKEGHWRYLVLGKACYHLGL 3
           KVMAGLC + EKEG WRYLVLG+AC HLGL
Sbjct: 142 KVMAGLCKNCEKEGQWRYLVLGQACCHLGL 171


>emb|CAN62070.1| hypothetical protein VITISV_036192 [Vitis vinifera]
          Length = 542

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 53/90 (58%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
 Frame = -3

Query: 257 QDYIPSLKMXXXXXXXXXXXXXXXXSKERVKLLPGENSSEGDS-----SFKCFSVSELKN 93
           QDYIPSLKM                 +ERVKLL   N+S  DS     SFKCFSVS+LK 
Sbjct: 68  QDYIPSLKMVSDDSSSDNSSQQLS--RERVKLLSSSNNSSSDSPIRDPSFKCFSVSDLKK 125

Query: 92  KVMAGLCLSFEKEGHWRYLVLGKACYHLGL 3
           KVMAGLC + EKEG WRYLVLG+AC HLGL
Sbjct: 126 KVMAGLCKNCEKEGQWRYLVLGQACCHLGL 155


>ref|XP_002320311.1| predicted protein [Populus trichocarpa] gi|222861084|gb|EEE98626.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 50/87 (57%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
 Frame = -3

Query: 257 QDYIPSLKMXXXXXXXXXXXXXXXXS--KERVKLLPGENSSEGDSSFKCFSVSELKNKVM 84
           QDYIPSLKM                   +ERV LLP E +   D SFKCFSVS+LK KVM
Sbjct: 86  QDYIPSLKMANDDSGSISASDSSSQQLSRERVNLLPSEKT---DPSFKCFSVSDLKKKVM 142

Query: 83  AGLCLSFEKEGHWRYLVLGKACYHLGL 3
           AGLC + +KEG WRYLVLG+AC HLGL
Sbjct: 143 AGLCKNCDKEGQWRYLVLGQACCHLGL 169


>ref|XP_003554542.1| PREDICTED: uncharacterized protein LOC100808420 [Glycine max]
          Length = 570

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 49/86 (56%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
 Frame = -3

Query: 257 QDYIPSLKMXXXXXXXXXXXXXXXXSKERVKLLPGENSSE-GDSSFKCFSVSELKNKVMA 81
           QDYIPSL+M                S+E VKLL   + S   D SFKCFSVS+LK KVMA
Sbjct: 85  QDYIPSLRMGNDDSSSSSSDSSQQLSREGVKLLSSSSESPVRDHSFKCFSVSDLKKKVMA 144

Query: 80  GLCLSFEKEGHWRYLVLGKACYHLGL 3
           GLC + +KEG WRYLVLG+AC HLGL
Sbjct: 145 GLCKTCDKEGQWRYLVLGEACCHLGL 170


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