BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027834
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   254   7e-66
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   252   4e-65
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   252   4e-65
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   251   9e-65
ref|XP_002530492.1| cell cycle control protein cwf22, putative [...   249   4e-64

>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score =  254 bits (650), Expect = 7e-66
 Identities = 139/210 (66%), Positives = 161/210 (76%), Gaps = 9/210 (4%)
 Frame = +2

Query: 2   IVALEWLTVLLENPTDDSVEVAVGFVTECGSLLQDLSPKALAGIFELFRGILYKGEIHNR 181
           I+ALE LTVLLENPTDDSVEVAVGFVTECGS+L+DLSPK L GIFE FRGIL++GEI  R
Sbjct: 364 IIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKR 423

Query: 182 VLFLIEGLFAIRKAKFKGYPAVGSELDLVDQEDKVTHEISVVDKINDPETSLDIFKADSR 361
           V FLIEGLFAIRKAKF+GYPAV  ELDLV+QED++THEIS+ ++I DPE +LDIFK+D  
Sbjct: 424 VQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEI-DPEITLDIFKSDPN 482

Query: 362 FLENEKRYEELKRNILGNKS---------SSKGSAXXXXXXXXXXXXXXKMGVHDETETE 514
           FLENEKRYE+LK+NILG +S          S  S               +M ++DETET 
Sbjct: 483 FLENEKRYEDLKKNILGEESEDEEDRSDAGSDESEDEDEEDESEEEDEEQMQINDETETN 542

Query: 515 RVNLRGAIYLTIMSCVNFEEAGHKLLQITL 604
            VNLR  IYLTIMS V+FEEAGHKLL+I L
Sbjct: 543 LVNLRRTIYLTIMSSVDFEEAGHKLLKIKL 572


>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
           homolog, partial [Cucumis sativus]
          Length = 780

 Score =  252 bits (643), Expect = 4e-65
 Identities = 138/210 (65%), Positives = 160/210 (76%), Gaps = 9/210 (4%)
 Frame = +2

Query: 2   IVALEWLTVLLENPTDDSVEVAVGFVTECGSLLQDLSPKALAGIFELFRGILYKGEIHNR 181
           I+ALE LTVLLENPTDDSVEVAVGFVTECGS+L+DLSPK L GIFE FRGIL++GEI  R
Sbjct: 364 IIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKR 423

Query: 182 VLFLIEGLFAIRKAKFKGYPAVGSELDLVDQEDKVTHEISVVDKINDPETSLDIFKADSR 361
           V FLIEGLFAIRKAKF+GYPAV  ELDLV+QED++THEIS+ ++I DPE +LDIFK+D  
Sbjct: 424 VQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEI-DPEITLDIFKSDPN 482

Query: 362 FLENEKRYEELKRNILGNKS---------SSKGSAXXXXXXXXXXXXXXKMGVHDETETE 514
           FLENEKRYE+LK+ ILG +S          S  S               +M ++DETET 
Sbjct: 483 FLENEKRYEDLKKXILGEESEDEEDRSDAGSDESEDEDEEDESEEEDEEQMQINDETETN 542

Query: 515 RVNLRGAIYLTIMSCVNFEEAGHKLLQITL 604
            VNLR  IYLTIMS V+FEEAGHKLL+I L
Sbjct: 543 LVNLRRTIYLTIMSSVDFEEAGHKLLKIKL 572


>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 871

 Score =  252 bits (643), Expect = 4e-65
 Identities = 137/208 (65%), Positives = 158/208 (75%), Gaps = 7/208 (3%)
 Frame = +2

Query: 2    IVALEWLTVLLENPTDDSVEVAVGFVTECGSLLQDLSPKALAGIFELFRGILYKGEIHNR 181
            I+ALE LTVLLE PTDDSVEVAVGFVTECGS+LQDLSPK L GIFE FRGIL++GEI  R
Sbjct: 443  IIALELLTVLLEKPTDDSVEVAVGFVTECGSILQDLSPKGLHGIFERFRGILHEGEIDKR 502

Query: 182  VLFLIEGLFAIRKAKFKGYPAVGSELDLVDQEDKVTHEISVVDKINDPETSLDIFKADSR 361
            V FLIEGLFAIRKAKF+GYPAV  ELDLV+QED++THE+S+ ++I DPE SLDIFK D  
Sbjct: 503  VQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEVSLDEEI-DPEISLDIFKPDPN 561

Query: 362  FLENEKRYEELKRNILGNKS-------SSKGSAXXXXXXXXXXXXXXKMGVHDETETERV 520
            FLENEKRYEELK+++LG +S        S+                 +M + DETET  V
Sbjct: 562  FLENEKRYEELKKSMLGEESEDDEEGLDSESDDDDDEDDESDEEEEEQMQIKDETETNLV 621

Query: 521  NLRGAIYLTIMSCVNFEEAGHKLLQITL 604
            NLR  IYLTIMS V+FEEAGHKLL+I L
Sbjct: 622  NLRRTIYLTIMSSVDFEEAGHKLLKIKL 649


>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 860

 Score =  251 bits (640), Expect = 9e-65
 Identities = 137/207 (66%), Positives = 157/207 (75%), Gaps = 6/207 (2%)
 Frame = +2

Query: 2    IVALEWLTVLLENPTDDSVEVAVGFVTECGSLLQDLSPKALAGIFELFRGILYKGEIHNR 181
            I+ALE LTVLLE PTDDSVEVAVGFVTECGS+LQDLSPK L GIFE FRGIL++GEI  R
Sbjct: 427  IIALELLTVLLEKPTDDSVEVAVGFVTECGSILQDLSPKGLHGIFERFRGILHEGEIDKR 486

Query: 182  VLFLIEGLFAIRKAKFKGYPAVGSELDLVDQEDKVTHEISVVDKINDPETSLDIFKADSR 361
            V FLIEGLFAIRKAKF+GYPAV  ELDLV+QED++THE+S+ ++I DPE SLDIFK D  
Sbjct: 487  VQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQITHEVSLDEEI-DPEISLDIFKPDPN 545

Query: 362  FLENEKRYEELKRNILGNKSS------SKGSAXXXXXXXXXXXXXXKMGVHDETETERVN 523
            FLENEKRYEELK+++LG +S          S               +M + DETET  VN
Sbjct: 546  FLENEKRYEELKKSMLGEESEDDEEGLDAESDDDDEDDDSDEEDEEEMQIKDETETNLVN 605

Query: 524  LRGAIYLTIMSCVNFEEAGHKLLQITL 604
            LR  IYLTIMS V+FEEAGHKLL+I L
Sbjct: 606  LRRTIYLTIMSSVDFEEAGHKLLKIKL 632


>ref|XP_002530492.1| cell cycle control protein cwf22, putative [Ricinus communis]
           gi|223529949|gb|EEF31876.1| cell cycle control protein
           cwf22, putative [Ricinus communis]
          Length = 810

 Score =  249 bits (635), Expect = 4e-64
 Identities = 135/208 (64%), Positives = 157/208 (75%), Gaps = 7/208 (3%)
 Frame = +2

Query: 2   IVALEWLTVLLENPTDDSVEVAVGFVTECGSLLQDLSPKALAGIFELFRGILYKGEIHNR 181
           I+ALE L VLLENPTDDSVEVAVGFVTECGS+LQD+SPK L G FE FRGIL++GEI  R
Sbjct: 344 IIALELLAVLLENPTDDSVEVAVGFVTECGSILQDVSPKGLDGAFERFRGILHEGEIDKR 403

Query: 182 VLFLIEGLFAIRKAKFKGYPAVGSELDLVDQEDKVTHEISVVDKINDPETSLDIFKADSR 361
           V FLIEGLFAIRKAKF+GYPAV  ELDLV+QED++THEIS+ + I DPE +LDIFK D  
Sbjct: 404 VQFLIEGLFAIRKAKFQGYPAVRPELDLVEQEDQLTHEISLQEDI-DPEITLDIFKPDPD 462

Query: 362 FLENEKRYEELKRNILGNKS-------SSKGSAXXXXXXXXXXXXXXKMGVHDETETERV 520
           FLENEKRYEELK++ILG +S       ++ G                +M + DETET  +
Sbjct: 463 FLENEKRYEELKKSILGEESEDEEVSDAASGDEDEDDDEESEEEDEEQMQIKDETETNLI 522

Query: 521 NLRGAIYLTIMSCVNFEEAGHKLLQITL 604
           NLR  IYLTIMS V+FEEAGHKLL+I L
Sbjct: 523 NLRRTIYLTIMSSVDFEEAGHKLLKIKL 550