BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027825
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   163   3e-38
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   150   3e-34
ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|2...   147   3e-33
tpg|DAA60657.1| TPA: hypothetical protein ZEAMMB73_133926 [Zea m...   139   9e-31
tpg|DAA60656.1| TPA: hypothetical protein ZEAMMB73_133926 [Zea m...   139   9e-31

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  163 bits (413), Expect = 3e-38
 Identities = 81/120 (67%), Positives = 91/120 (75%), Gaps = 2/120 (1%)
 Frame = -1

Query: 770 QLRVHCAEVLGTPIVGDYKYGWQAHRNWKPMPGSYLEKT--EKLPKLKMVPFGLDLESGS 597
           QLRVHCAEVLGTPIVGDYKYGWQAHR WK +  S +EK   E L   K  PFGLDLESGS
Sbjct: 357 QLRVHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGS 416

Query: 596 ILEKRPHLHLHCKRMVLPDVSLALQHMQISTDHXXXXXXXXXLVAPLPLHMQRSWDALRS 417
           IL+K+PHLHLHCK+MVLP+VSLALQ++Q+S +           VAPLP HMQRSWD L S
Sbjct: 417 ILDKQPHLHLHCKQMVLPNVSLALQNLQLSAECDLSELESLEFVAPLPSHMQRSWDILNS 476


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score =  150 bits (379), Expect = 3e-34
 Identities = 76/120 (63%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
 Frame = -1

Query: 770 QLRVHCAEVLGTPIVGDYKYGWQAHRNWKPMPGSYLEKTEKLPKL--KMVPFGLDLESGS 597
           QLRVHCAEVLGTPIVGDYKYGWQ HR WK +P   LEK      L  K++PFG+DLESGS
Sbjct: 417 QLRVHCAEVLGTPIVGDYKYGWQVHRKWKQLPFPNLEKISNENALCKKILPFGIDLESGS 476

Query: 596 ILEKRPHLHLHCKRMVLPDVSLALQHMQISTDHXXXXXXXXXLVAPLPLHMQRSWDALRS 417
           I EK P LHLHCK+MVLPDVS AL+ +Q S+++         L APLP +MQRSWD L S
Sbjct: 477 ISEKHPRLHLHCKQMVLPDVSQALRGVQTSSNYDFSDLKSIELDAPLPSYMQRSWDILNS 536


>ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|222850284|gb|EEE87831.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  147 bits (370), Expect = 3e-33
 Identities = 72/118 (61%), Positives = 86/118 (72%), Gaps = 2/118 (1%)
 Frame = -1

Query: 770 QLRVHCAEVLGTPIVGDYKYGWQAHRNWKPMPGSYLE--KTEKLPKLKMVPFGLDLESGS 597
           QLRVHCAEVLGTPIVGDYKY WQAHRNWK +  S +E    +K    K++PF LDL+SGS
Sbjct: 207 QLRVHCAEVLGTPIVGDYKYAWQAHRNWKQLQWSNIEDNSNDKSLSEKILPFALDLDSGS 266

Query: 596 ILEKRPHLHLHCKRMVLPDVSLALQHMQISTDHXXXXXXXXXLVAPLPLHMQRSWDAL 423
           I EK P LHLHCK+MVLPDVS ALQ +Q+S+D+           APLP +M++SWD L
Sbjct: 267 ISEKHPRLHLHCKQMVLPDVSKALQDVQLSSDYDFSQLASLKFDAPLPPYMKKSWDIL 324


>tpg|DAA60657.1| TPA: hypothetical protein ZEAMMB73_133926 [Zea mays]
          Length = 549

 Score =  139 bits (349), Expect = 9e-31
 Identities = 70/119 (58%), Positives = 82/119 (68%), Gaps = 1/119 (0%)
 Frame = -1

Query: 770 QLRVHCAEVLGTPIVGDYKYGWQAHRNWKPMPGSYLEKTEKLPKLKMVPFGLDLESGSIL 591
           QLRVHCAEVLGTPIVGDYKYG QAH+NW P+P       E L K K+ PFGL L  GS+ 
Sbjct: 429 QLRVHCAEVLGTPIVGDYKYGRQAHQNWMPLPMPQTIDKEMLKKRKL-PFGLTLGGGSVA 487

Query: 590 EKRPHLHLHCKRMVLPDVSLALQHMQIS-TDHXXXXXXXXXLVAPLPLHMQRSWDALRS 417
           E++P LHLHCK+M+LPD+S A+Q ++ S  DH          VAPLPLHMQ SW  L S
Sbjct: 488 EQQPQLHLHCKQMILPDISAAMQQLRSSDADHDFSDLEKLSFVAPLPLHMQLSWKILLS 546


>tpg|DAA60656.1| TPA: hypothetical protein ZEAMMB73_133926 [Zea mays]
          Length = 503

 Score =  139 bits (349), Expect = 9e-31
 Identities = 70/119 (58%), Positives = 82/119 (68%), Gaps = 1/119 (0%)
 Frame = -1

Query: 770 QLRVHCAEVLGTPIVGDYKYGWQAHRNWKPMPGSYLEKTEKLPKLKMVPFGLDLESGSIL 591
           QLRVHCAEVLGTPIVGDYKYG QAH+NW P+P       E L K K+ PFGL L  GS+ 
Sbjct: 383 QLRVHCAEVLGTPIVGDYKYGRQAHQNWMPLPMPQTIDKEMLKKRKL-PFGLTLGGGSVA 441

Query: 590 EKRPHLHLHCKRMVLPDVSLALQHMQIS-TDHXXXXXXXXXLVAPLPLHMQRSWDALRS 417
           E++P LHLHCK+M+LPD+S A+Q ++ S  DH          VAPLPLHMQ SW  L S
Sbjct: 442 EQQPQLHLHCKQMILPDISAAMQQLRSSDADHDFSDLEKLSFVAPLPLHMQLSWKILLS 500