BLASTX nr result

ID: Coptis21_contig00027811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027811
         (199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529646.1| histidine kinase 1 plant, putative [Ricinus ...    65   4e-09
gb|AAQ10680.2| cold inducible histidine kinase 1 [Catharanthus r...    60   2e-07
emb|CAI78447.1| osmosensor histidine-aspartate kinase [Populus x...    60   2e-07
emb|CAC42409.1| putative osmosensor histidine Kinase [Populus x ...    60   2e-07
ref|XP_003612202.1| Histidine kinase osmosensor protein [Medicag...    58   9e-07

>ref|XP_002529646.1| histidine kinase 1 plant, putative [Ricinus communis]
           gi|223530872|gb|EEF32733.1| histidine kinase 1 plant,
           putative [Ricinus communis]
          Length = 1206

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
 Frame = -3

Query: 197 GHIILRGWCERFNTATYSEKLPLDQ--LRGWWIVNLCHERSQSNRKTIPRKKENKIIVWF 24
           GHI+LRGWCE  +T+  + K PL+Q  LR      L   R Q N      KKENK+I+WF
Sbjct: 640 GHIVLRGWCENISTSNDTAKSPLEQKKLRCALKTKL---RQQGNHMKKASKKENKVILWF 696

Query: 23  EVEDTGC 3
           EV+DTGC
Sbjct: 697 EVDDTGC 703


>gb|AAQ10680.2| cold inducible histidine kinase 1 [Catharanthus roseus]
          Length = 1205

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = -3

Query: 197 GHIILRGWCERFNTATYSEKLPLDQLRGWWIVNLCHERSQSNRKTIPRKKENKIIVWFEV 18
           GHII+RGWCE  N +       ++Q   W +  L  +   SN +   RK ENK+++WFEV
Sbjct: 627 GHIIVRGWCENQNPSISIRSSSINQKECWRLQRLKLKHQDSNDQKSFRK-ENKVVLWFEV 685

Query: 17  EDTGC 3
           EDTGC
Sbjct: 686 EDTGC 690


>emb|CAI78447.1| osmosensor histidine-aspartate kinase [Populus x canadensis]
          Length = 1249

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/65 (46%), Positives = 37/65 (56%)
 Frame = -3

Query: 197 GHIILRGWCERFNTATYSEKLPLDQLRGWWIVNLCHERSQSNRKTIPRKKENKIIVWFEV 18
           GHIILRGWCE  N      +  LDQ +    +     R Q N      KKENK+I+WFE+
Sbjct: 640 GHIILRGWCENLNNTYNDTQFHLDQKKMRCAIKP-KLRQQGNHLKKACKKENKMILWFEI 698

Query: 17  EDTGC 3
           +DTGC
Sbjct: 699 DDTGC 703


>emb|CAC42409.1| putative osmosensor histidine Kinase [Populus x canadensis]
          Length = 331

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/65 (46%), Positives = 37/65 (56%)
 Frame = -3

Query: 197 GHIILRGWCERFNTATYSEKLPLDQLRGWWIVNLCHERSQSNRKTIPRKKENKIIVWFEV 18
           GHIILRGWCE  N      +  LDQ +    +     R Q N      KKENK+I+WFE+
Sbjct: 127 GHIILRGWCENLNNTYNDTQFHLDQKKMRCAIKP-KLRQQGNHLKKACKKENKMILWFEI 185

Query: 17  EDTGC 3
           +DTGC
Sbjct: 186 DDTGC 190


>ref|XP_003612202.1| Histidine kinase osmosensor protein [Medicago truncatula]
           gi|355513537|gb|AES95160.1| Histidine kinase osmosensor
           protein [Medicago truncatula]
          Length = 1218

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/65 (44%), Positives = 40/65 (61%)
 Frame = -3

Query: 197 GHIILRGWCERFNTATYSEKLPLDQLRGWWIVNLCHERSQSNRKTIPRKKENKIIVWFEV 18
           GH+ILRGWCE  N+   S    LDQ +   +     + + S+ K I  + +NK+I+WFEV
Sbjct: 663 GHVILRGWCEYPNSCNDSPNFYLDQKKSRNLHKSKEKPNASHAKRISMR-DNKVILWFEV 721

Query: 17  EDTGC 3
           EDTGC
Sbjct: 722 EDTGC 726


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